RNA–Protein interactions for RNA: ENST00000542683.1

C2CD5-213, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 5

Gene C2CD5, Length 791 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-213ENST00000542683 TET3O43151 1660 aa19.3■□□□□ 0.68
C2CD5-213ENST00000542683 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
C2CD5-213ENST00000542683 XIRP1Q702N8 1843 aaKnown RBP19.3■□□□□ 0.68
C2CD5-213ENST00000542683 NKTRP30414 1462 aaKnown RBP19.3■□□□□ 0.68
C2CD5-213ENST00000542683 FAM50AQ14320 339 aaKnown RBP19.3■□□□□ 0.68
C2CD5-213ENST00000542683 MEX3CQ5U5Q3 659 aaKnown RBP19.3■□□□□ 0.68
C2CD5-213ENST00000542683 ADGRB3O60242 1522 aa19.27■□□□□ 0.68
C2CD5-213ENST00000542683 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.27■□□□□ 0.68
C2CD5-213ENST00000542683 PLEKHG1Q9ULL1 1385 aa19.27■□□□□ 0.68
C2CD5-213ENST00000542683 TBX22Q9Y458 520 aa19.26■□□□□ 0.67
C2CD5-213ENST00000542683 CROCC2H7BZ55 1655 aa19.26■□□□□ 0.67
C2CD5-213ENST00000542683 KDM5AP29375 1690 aaKnown RBP19.26■□□□□ 0.67
C2CD5-213ENST00000542683 ATF3P18847 181 aa19.25■□□□□ 0.67
C2CD5-213ENST00000542683 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
C2CD5-213ENST00000542683 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
C2CD5-213ENST00000542683 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
C2CD5-213ENST00000542683 CADPS2Q86UW7 1296 aa19.23■□□□□ 0.67
C2CD5-213ENST00000542683 ANKRD50Q9ULJ7 1429 aa19.23■□□□□ 0.67
C2CD5-213ENST00000542683 SPATA31A6Q5VVP1 1343 aa19.23■□□□□ 0.67
C2CD5-213ENST00000542683 TRIM52Q96A61 297 aa19.22■□□□□ 0.67
C2CD5-213ENST00000542683 C19orf44Q9H6X5 657 aa19.22■□□□□ 0.67
C2CD5-213ENST00000542683 NWD1Q149M9 1564 aa19.22■□□□□ 0.67
C2CD5-213ENST00000542683 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
C2CD5-213ENST00000542683 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
C2CD5-213ENST00000542683 NCOA3Q9Y6Q9 1424 aa19.2■□□□□ 0.66
C2CD5-213ENST00000542683 PHLPP1O60346 1717 aa19.19■□□□□ 0.66
C2CD5-213ENST00000542683 ADGRL2O95490 1459 aa19.17■□□□□ 0.66
C2CD5-213ENST00000542683 NUTM2BA6NNL0 878 aaPredicted RBP19.17■□□□□ 0.66
C2CD5-213ENST00000542683 NUTM2EB1AL46 878 aaPredicted RBP19.17■□□□□ 0.66
C2CD5-213ENST00000542683 NUTM2AQ8IVF1 878 aaPredicted RBP19.17■□□□□ 0.66
C2CD5-213ENST00000542683 RXRBP28702 533 aa19.16■□□□□ 0.66
C2CD5-213ENST00000542683 AMOTL2Q9Y2J4 779 aa19.16■□□□□ 0.66
C2CD5-213ENST00000542683 UPF1Q92900 1129 aaKnown RBP eCLIP19.15■□□□□ 0.66
C2CD5-213ENST00000542683 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
C2CD5-213ENST00000542683 BRINP3Q76B58 766 aa19.12■□□□□ 0.65
C2CD5-213ENST00000542683 LRP6O75581 1613 aa19.11■□□□□ 0.65
C2CD5-213ENST00000542683 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
C2CD5-213ENST00000542683 COL16A1Q07092 1604 aaPredicted RBP19.1■□□□□ 0.65
C2CD5-213ENST00000542683 SETD1AO15047 1707 aaKnown RBP19.09■□□□□ 0.65
C2CD5-213ENST00000542683 TMEM131LA2VDJ0 1609 aa19.09■□□□□ 0.65
C2CD5-213ENST00000542683 CHD2O14647 1828 aaKnown RBP19.09■□□□□ 0.65
C2CD5-213ENST00000542683 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
C2CD5-213ENST00000542683 NUP155O75694 1391 aa19.06■□□□□ 0.64
C2CD5-213ENST00000542683 AFF2P51816 1311 aa19.06■□□□□ 0.64
C2CD5-213ENST00000542683 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
C2CD5-213ENST00000542683 LRRC59Q96AG4 307 aaKnown RBP19.06■□□□□ 0.64
C2CD5-213ENST00000542683 ITGAEP38570 1179 aa19.05■□□□□ 0.64
C2CD5-213ENST00000542683 AHDC1Q5TGY3 1603 aaPredicted RBP19.04■□□□□ 0.64
C2CD5-213ENST00000542683 DIP2AQ14689 1571 aa19.04■□□□□ 0.64
C2CD5-213ENST00000542683 C8orf37Q96NL8 207 aa19.04■□□□□ 0.64
C2CD5-213ENST00000542683 TRPM2O94759 1503 aa19.03■□□□□ 0.64
C2CD5-213ENST00000542683 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
C2CD5-213ENST00000542683 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
C2CD5-213ENST00000542683 QTRT2Q9H974 415 aaKnown RBP19.01■□□□□ 0.63
C2CD5-213ENST00000542683 MYO5BQ9ULV0 1848 aa19.01■□□□□ 0.63
C2CD5-213ENST00000542683 DCCP43146 1447 aa19■□□□□ 0.63
C2CD5-213ENST00000542683 ROCK1Q13464 1354 aa19■□□□□ 0.63
C2CD5-213ENST00000542683 DDX17Q92841 729 aaKnown RBP18.99■□□□□ 0.63
C2CD5-213ENST00000542683 RBM6P78332 1123 aaKnown RBP18.98■□□□□ 0.63
C2CD5-213ENST00000542683 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
C2CD5-213ENST00000542683 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
C2CD5-213ENST00000542683 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
C2CD5-213ENST00000542683 UNC13BO14795 1591 aa18.98■□□□□ 0.63
C2CD5-213ENST00000542683 ASXL1Q8IXJ9 1541 aa18.97■□□□□ 0.63
C2CD5-213ENST00000542683 ADAMTS2O95450 1211 aa18.97■□□□□ 0.63
C2CD5-213ENST00000542683 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
C2CD5-213ENST00000542683 METP08581 1390 aa18.96■□□□□ 0.63
C2CD5-213ENST00000542683 MST1RQ04912 1400 aa18.96■□□□□ 0.63
C2CD5-213ENST00000542683 E9PCH4 1651 aa18.95■□□□□ 0.62
C2CD5-213ENST00000542683 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
C2CD5-213ENST00000542683 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
C2CD5-213ENST00000542683 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
C2CD5-213ENST00000542683 USP21Q9UK80 565 aa18.89■□□□□ 0.61
C2CD5-213ENST00000542683 RGS12O14924 1447 aa18.89■□□□□ 0.61
C2CD5-213ENST00000542683 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
C2CD5-213ENST00000542683 FOXD1Q16676 465 aa18.88■□□□□ 0.61
C2CD5-213ENST00000542683 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
C2CD5-213ENST00000542683 VGFO15240 615 aaPredicted RBP18.86■□□□□ 0.61
C2CD5-213ENST00000542683 ORAI2Q96SN7 254 aa18.86■□□□□ 0.61
C2CD5-213ENST00000542683 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
C2CD5-213ENST00000542683 C1orf167Q5SNV9 1468 aa18.85■□□□□ 0.61
C2CD5-213ENST00000542683 ATAD2Q6PL18 1390 aa18.85■□□□□ 0.61
C2CD5-213ENST00000542683 XRN1Q8IZH2 1706 aaKnown RBP18.85■□□□□ 0.61
C2CD5-213ENST00000542683 NHSL1Q5SYE7 1610 aa18.82■□□□□ 0.6
C2CD5-213ENST00000542683 NRXN3Q9Y4C0 1643 aa18.82■□□□□ 0.6
C2CD5-213ENST00000542683 SOS2Q07890 1332 aaPredicted RBP18.82■□□□□ 0.6
C2CD5-213ENST00000542683 ZRANB1Q9UGI0 708 aa18.82■□□□□ 0.6
C2CD5-213ENST00000542683 FNBP4Q8N3X1 1017 aaPredicted RBP18.8■□□□□ 0.6
C2CD5-213ENST00000542683 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
C2CD5-213ENST00000542683 ROBO2Q9HCK4 1378 aa18.79■□□□□ 0.6
C2CD5-213ENST00000542683 SRCAPQ6ZRS2 3230 aa18.78■□□□□ 0.6
C2CD5-213ENST00000542683 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
C2CD5-213ENST00000542683 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
C2CD5-213ENST00000542683 NEXMIFQ5QGS0 1516 aa18.76■□□□□ 0.59
C2CD5-213ENST00000542683 SPHKAPQ2M3C7 1700 aa18.76■□□□□ 0.59
C2CD5-213ENST00000542683 RPGRIP1LQ68CZ1 1315 aa18.75■□□□□ 0.59
C2CD5-213ENST00000542683 CCDC125Q86Z20 511 aa18.75■□□□□ 0.59
C2CD5-213ENST00000542683 FOXO3O43524 673 aa18.74■□□□□ 0.59
C2CD5-213ENST00000542683 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
C2CD5-213ENST00000542683 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms