RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-204ENST00000541225 A2MP01023 1474 aa6.55□□□□□ -1.36
ABCA8-204ENST00000541225 KLHL34Q8N239 644 aa6.55□□□□□ -1.36
ABCA8-204ENST00000541225 MED14O60244 1454 aa6.54□□□□□ -1.36
ABCA8-204ENST00000541225 ARHGEF28Q8N1W1 1705 aaKnown RBP6.54□□□□□ -1.36
ABCA8-204ENST00000541225 GLI2P10070 1586 aa6.54□□□□□ -1.36
ABCA8-204ENST00000541225 CEP170BQ9Y4F5 1589 aaPredicted RBP6.54□□□□□ -1.36
ABCA8-204ENST00000541225 ANP32CO43423 234 aa6.54□□□□□ -1.36
ABCA8-204ENST00000541225 HNRNPUL2Q1KMD3 747 aaKnown RBP6.54□□□□□ -1.36
ABCA8-204ENST00000541225 COL3A1P02461 1466 aaPredicted RBP6.53□□□□□ -1.36
ABCA8-204ENST00000541225 MYH15Q9Y2K3 1946 aa6.53□□□□□ -1.36
ABCA8-204ENST00000541225 NBPF8Q3BBV2 869 aa6.53□□□□□ -1.36
ABCA8-204ENST00000541225 SIN3AQ96ST3 1273 aa6.53□□□□□ -1.36
ABCA8-204ENST00000541225 FANCAO15360 1455 aa6.53□□□□□ -1.36
ABCA8-204ENST00000541225 KIF15Q9NS87 1388 aa6.53□□□□□ -1.36
ABCA8-204ENST00000541225 HSPA5P11021 654 aaKnown RBP6.53□□□□□ -1.36
ABCA8-204ENST00000541225 GSE1Q14687 1217 aa6.53□□□□□ -1.36
ABCA8-204ENST00000541225 RGPD1P0DJD0 1748 aa6.52□□□□□ -1.37
ABCA8-204ENST00000541225 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
ABCA8-204ENST00000541225 ISY1Q9ULR0 285 aaKnown RBP6.52□□□□□ -1.37
ABCA8-204ENST00000541225 NRKQ7Z2Y5 1582 aa6.52□□□□□ -1.37
ABCA8-204ENST00000541225 IL17RAQ96F46 866 aa6.52□□□□□ -1.37
ABCA8-204ENST00000541225 IFT140Q96RY7 1462 aa6.52□□□□□ -1.37
ABCA8-204ENST00000541225 ERBINQ96RT1 1412 aa6.52□□□□□ -1.37
ABCA8-204ENST00000541225 PPM1GO15355 546 aaPredicted RBP6.52□□□□□ -1.37
ABCA8-204ENST00000541225 MED1Q15648 1581 aaPredicted RBP6.51□□□□□ -1.37
ABCA8-204ENST00000541225 DDX10Q13206 875 aaKnown RBP6.51□□□□□ -1.37
ABCA8-204ENST00000541225 LRRC37A3O60309 1634 aa6.51□□□□□ -1.37
ABCA8-204ENST00000541225 RRP1P56182 461 aaKnown RBP6.51□□□□□ -1.37
ABCA8-204ENST00000541225 CALD1Q05682 793 aaKnown RBP6.51□□□□□ -1.37
ABCA8-204ENST00000541225 HECW2Q9P2P5 1572 aa6.5□□□□□ -1.37
ABCA8-204ENST00000541225 RIMS1Q86UR5 1692 aaKnown RBP6.5□□□□□ -1.37
ABCA8-204ENST00000541225 SBNO2Q9Y2G9 1366 aa6.5□□□□□ -1.37
ABCA8-204ENST00000541225 KIF20BQ96Q89 1820 aa6.5□□□□□ -1.37
ABCA8-204ENST00000541225 VGFO15240 615 aaPredicted RBP6.5□□□□□ -1.37
ABCA8-204ENST00000541225 NALCNQ8IZF0 1738 aa6.5□□□□□ -1.37
ABCA8-204ENST00000541225 RRAGDQ9NQL2 400 aaPredicted RBP6.49□□□□□ -1.37
ABCA8-204ENST00000541225 TROQ12816 1431 aaPredicted RBP6.49□□□□□ -1.37
ABCA8-204ENST00000541225 ASXL1Q8IXJ9 1541 aa6.49□□□□□ -1.37
ABCA8-204ENST00000541225 TONSLQ96HA7 1378 aa6.49□□□□□ -1.37
ABCA8-204ENST00000541225 PPIP5K1Q6PFW1 1433 aa6.48□□□□□ -1.37
ABCA8-204ENST00000541225 MYO5BQ9ULV0 1848 aa6.48□□□□□ -1.37
ABCA8-204ENST00000541225 ADGRB3O60242 1522 aa6.48□□□□□ -1.37
ABCA8-204ENST00000541225 UBTFP17480 764 aaKnown RBP6.48□□□□□ -1.37
ABCA8-204ENST00000541225 PDE4AP27815 886 aa6.48□□□□□ -1.37
ABCA8-204ENST00000541225 ASXL2Q76L83 1435 aa6.48□□□□□ -1.37
ABCA8-204ENST00000541225 ERVK-7P63135 1459 aa6.47□□□□□ -1.37
ABCA8-204ENST00000541225 ANKRD30AQ9BXX3 1397 aa6.47□□□□□ -1.37
ABCA8-204ENST00000541225 UTP14CQ5TAP6 766 aaKnown RBP6.47□□□□□ -1.37
ABCA8-204ENST00000541225 UGGT1Q9NYU2 1555 aa6.47□□□□□ -1.37
ABCA8-204ENST00000541225 ABCC1P33527 1531 aa6.47□□□□□ -1.37
ABCA8-204ENST00000541225 PKNOX2Q96KN3 472 aa6.46□□□□□ -1.37
ABCA8-204ENST00000541225 PPP1R9BQ96SB3 815 aa6.46□□□□□ -1.37
ABCA8-204ENST00000541225 MYBBP1AQ9BQG0 1328 aaKnown RBP6.46□□□□□ -1.37
ABCA8-204ENST00000541225 USP47Q96K76 1375 aa6.46□□□□□ -1.37
ABCA8-204ENST00000541225 ABCC3O15438 1527 aa6.46□□□□□ -1.37
ABCA8-204ENST00000541225 AAMPQ13685 434 aa6.46□□□□□ -1.38
ABCA8-204ENST00000541225 NFKBIBQ15653 356 aa6.46□□□□□ -1.38
ABCA8-204ENST00000541225 KIF1BO60333 1816 aa6.45□□□□□ -1.38
ABCA8-204ENST00000541225 ATP7AQ04656 1500 aa6.45□□□□□ -1.38
ABCA8-204ENST00000541225 RAD50Q92878 1312 aa6.45□□□□□ -1.38
ABCA8-204ENST00000541225 NEXMIFQ5QGS0 1516 aa6.45□□□□□ -1.38
ABCA8-204ENST00000541225 ITGAEP38570 1179 aa6.45□□□□□ -1.38
ABCA8-204ENST00000541225 PIK3R4Q99570 1358 aa6.45□□□□□ -1.38
ABCA8-204ENST00000541225 RALBP1Q15311 655 aa6.45□□□□□ -1.38
ABCA8-204ENST00000541225 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
ABCA8-204ENST00000541225 ZFYVE16Q7Z3T8 1539 aa6.44□□□□□ -1.38
ABCA8-204ENST00000541225 AMER1Q5JTC6 1135 aaPredicted RBP6.44□□□□□ -1.38
ABCA8-204ENST00000541225 DLG5Q8TDM6 1919 aa6.44□□□□□ -1.38
ABCA8-204ENST00000541225 AKAP12Q02952 1782 aa6.44□□□□□ -1.38
ABCA8-204ENST00000541225 TESK2Q96S53 571 aa6.44□□□□□ -1.38
ABCA8-204ENST00000541225 NKTRP30414 1462 aaKnown RBP6.43□□□□□ -1.38
ABCA8-204ENST00000541225 PLEKHG5O94827 1062 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 HSP90AB1P08238 724 aaKnown RBP6.43□□□□□ -1.38
ABCA8-204ENST00000541225 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
ABCA8-204ENST00000541225 HS1BP3Q53T59 392 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 PDLIM2Q96JY6 352 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 FAM53CQ9NYF3 392 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 FRAT1Q92837 279 aaPredicted RBP6.43□□□□□ -1.38
ABCA8-204ENST00000541225 DDRGK1Q96HY6 314 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 PLEKHH1Q9ULM0 1364 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 MON2Q7Z3U7 1717 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 MARF1Q9Y4F3 1742 aaKnown RBP6.43□□□□□ -1.38
ABCA8-204ENST00000541225 EIF4G2P78344 907 aaKnown RBP eCLIP6.43□□□□□ -1.38
ABCA8-204ENST00000541225 TOPAZ1Q8N9V7 1692 aa6.43□□□□□ -1.38
ABCA8-204ENST00000541225 XRN1Q8IZH2 1706 aaKnown RBP6.42□□□□□ -1.38
ABCA8-204ENST00000541225 SLC20A2Q08357 652 aa6.42□□□□□ -1.38
ABCA8-204ENST00000541225 MPHOSPH9Q99550 1183 aa6.42□□□□□ -1.38
ABCA8-204ENST00000541225 POLR3AO14802 1390 aaPredicted RBP6.42□□□□□ -1.38
ABCA8-204ENST00000541225 SIGLEC1Q9BZZ2 1709 aa6.42□□□□□ -1.38
ABCA8-204ENST00000541225 TRIM52Q96A61 297 aa6.42□□□□□ -1.38
ABCA8-204ENST00000541225 CGNL1Q0VF96 1302 aa6.42□□□□□ -1.38
ABCA8-204ENST00000541225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.41□□□□□ -1.38
ABCA8-204ENST00000541225 ARHGEF40Q8TER5 1519 aa6.41□□□□□ -1.38
ABCA8-204ENST00000541225 NOS1P29475 1434 aa6.41□□□□□ -1.38
ABCA8-204ENST00000541225 CDK12Q9NYV4 1490 aaPredicted RBP6.41□□□□□ -1.38
ABCA8-204ENST00000541225 L3MBTL2Q969R5 705 aa6.41□□□□□ -1.38
ABCA8-204ENST00000541225 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.41□□□□□ -1.38
ABCA8-204ENST00000541225 BRPF3Q9ULD4 1205 aa6.41□□□□□ -1.38
ABCA8-204ENST00000541225 RIMBP3CA6NJZ7 1639 aa6.41□□□□□ -1.38
ABCA8-204ENST00000541225 RIMBP3BA6NNM3 1639 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms