RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 PAK3O75914 559 aaPredicted RBP15.3■□□□□ 0.04
LGR5-203ENST00000540815 WASHC2CQ9Y4E1 1318 aa15.3■□□□□ 0.04
LGR5-203ENST00000540815 PER1O15534 1290 aaPredicted RBP15.3■□□□□ 0.04
LGR5-203ENST00000540815 LRPPRCP42704 1394 aaKnown RBP15.29■□□□□ 0.04
LGR5-203ENST00000540815 IFT172Q9UG01 1749 aa15.29■□□□□ 0.04
LGR5-203ENST00000540815 ERICH6BQ5W0A0 696 aa15.29■□□□□ 0.04
LGR5-203ENST00000540815 SCAF11Q99590 1463 aaKnown RBP15.29■□□□□ 0.04
LGR5-203ENST00000540815 MYOM2P54296 1465 aa15.29■□□□□ 0.04
LGR5-203ENST00000540815 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
LGR5-203ENST00000540815 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
LGR5-203ENST00000540815 IL27Q8NEV9 243 aa15.28■□□□□ 0.04
LGR5-203ENST00000540815 MAP3K4Q9Y6R4 1608 aa15.28■□□□□ 0.04
LGR5-203ENST00000540815 SMG6Q86US8 1419 aaKnown RBP15.28■□□□□ 0.04
LGR5-203ENST00000540815 MROH2AA6NES4 1674 aa15.27■□□□□ 0.04
LGR5-203ENST00000540815 NEO1Q92859 1461 aa15.27■□□□□ 0.03
LGR5-203ENST00000540815 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
LGR5-203ENST00000540815 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
LGR5-203ENST00000540815 PANK3Q9H999 370 aa15.24■□□□□ 0.03
LGR5-203ENST00000540815 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
LGR5-203ENST00000540815 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
LGR5-203ENST00000540815 SYNMO15061 1565 aa15.23■□□□□ 0.03
LGR5-203ENST00000540815 NPATQ14207 1427 aa15.23■□□□□ 0.03
LGR5-203ENST00000540815 RAPGEF3O95398 923 aa15.22■□□□□ 0.03
LGR5-203ENST00000540815 NRXN1Q9ULB1 1477 aa15.22■□□□□ 0.03
LGR5-203ENST00000540815 NUDCQ9Y266 331 aa15.22■□□□□ 0.03
LGR5-203ENST00000540815 ADGRF5Q8IZF2 1346 aa15.22■□□□□ 0.03
LGR5-203ENST00000540815 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
LGR5-203ENST00000540815 CFAP65Q6ZU64 1925 aaKnown RBP15.21■□□□□ 0.03
LGR5-203ENST00000540815 SENP3-EIF4A1A0A087X0R7 540 aa15.21■□□□□ 0.02
LGR5-203ENST00000540815 DNAJC5Q9H3Z4 198 aa15.2■□□□□ 0.02
LGR5-203ENST00000540815 ABCC3O15438 1527 aa15.2■□□□□ 0.02
LGR5-203ENST00000540815 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
LGR5-203ENST00000540815 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
LGR5-203ENST00000540815 MYOM1P52179 1685 aa15.2■□□□□ 0.02
LGR5-203ENST00000540815 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
LGR5-203ENST00000540815 GGT6Q6P531 493 aa15.19■□□□□ 0.02
LGR5-203ENST00000540815 KDM5AP29375 1690 aaKnown RBP15.19■□□□□ 0.02
LGR5-203ENST00000540815 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
LGR5-203ENST00000540815 INSRP06213 1382 aa15.19■□□□□ 0.02
LGR5-203ENST00000540815 CFAP70Q5T0N1 1121 aa15.19■□□□□ 0.02
LGR5-203ENST00000540815 PPLO60437 1756 aa15.19■□□□□ 0.02
LGR5-203ENST00000540815 PPP4R2Q9NY27 417 aa15.18■□□□□ 0.02
LGR5-203ENST00000540815 SIGLEC1Q9BZZ2 1709 aa15.18■□□□□ 0.02
LGR5-203ENST00000540815 CC2D1BQ5T0F9 858 aaKnown RBP15.18■□□□□ 0.02
LGR5-203ENST00000540815 MYO3AQ8NEV4 1616 aa15.18■□□□□ 0.02
LGR5-203ENST00000540815 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
LGR5-203ENST00000540815 GLI2P10070 1586 aa15.17■□□□□ 0.02
LGR5-203ENST00000540815 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
LGR5-203ENST00000540815 RNF123Q5XPI4 1314 aa15.16■□□□□ 0.02
LGR5-203ENST00000540815 NOS1P29475 1434 aa15.16■□□□□ 0.02
LGR5-203ENST00000540815 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
LGR5-203ENST00000540815 ZC3H13Q5T200 1668 aaKnown RBP15.15■□□□□ 0.02
LGR5-203ENST00000540815 YEATS2Q9ULM3 1422 aa15.15■□□□□ 0.02
LGR5-203ENST00000540815 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
LGR5-203ENST00000540815 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
LGR5-203ENST00000540815 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
LGR5-203ENST00000540815 BLMP54132 1417 aaPredicted RBP15.14■□□□□ 0.01
LGR5-203ENST00000540815 ASXL1Q8IXJ9 1541 aa15.14■□□□□ 0.01
LGR5-203ENST00000540815 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
LGR5-203ENST00000540815 KNSTRNQ9Y448 316 aa15.13■□□□□ 0.01
LGR5-203ENST00000540815 ERVK-7P63135 1459 aa15.13■□□□□ 0.01
LGR5-203ENST00000540815 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
LGR5-203ENST00000540815 PIK3C2GO75747 1445 aa15.12■□□□□ 0.01
LGR5-203ENST00000540815 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
LGR5-203ENST00000540815 NPC1L1Q9UHC9 1359 aa15.12■□□□□ 0.01
LGR5-203ENST00000540815 SBNO2Q9Y2G9 1366 aa15.12■□□□□ 0.01
LGR5-203ENST00000540815 AMER1Q5JTC6 1135 aaPredicted RBP15.12■□□□□ 0.01
LGR5-203ENST00000540815 ARHGAP31Q2M1Z3 1444 aa15.11■□□□□ 0.01
LGR5-203ENST00000540815 CHGAP10645 457 aaKnown RBP15.11■□□□□ 0.01
LGR5-203ENST00000540815 PDE3BQ13370 1112 aa15.1■□□□□ 0.01
LGR5-203ENST00000540815 ADGRB1O14514 1584 aa15.09■□□□□ 0.01
LGR5-203ENST00000540815 DIP2BQ9P265 1576 aa15.08■□□□□ 0
LGR5-203ENST00000540815 C14orf93Q9H972 538 aaKnown RBP15.08■□□□□ 0
LGR5-203ENST00000540815 PPP2R1AP30153 589 aa15.07■□□□□ 0
LGR5-203ENST00000540815 QRICH2Q9H0J4 1663 aa15.07■□□□□ 0
LGR5-203ENST00000540815 NEXMIFQ5QGS0 1516 aa15.06■□□□□ 0
LGR5-203ENST00000540815 CENPJQ9HC77 1338 aaPredicted RBP15.05■□□□□ 0
LGR5-203ENST00000540815 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
LGR5-203ENST00000540815 PREX1Q8TCU6 1659 aa15.03■□□□□ -0
LGR5-203ENST00000540815 TMEM132EQ6IEE7 984 aa15.03■□□□□ -0
LGR5-203ENST00000540815 TSPOAP1O95153 1857 aa15.03■□□□□ -0
LGR5-203ENST00000540815 CARD14Q9BXL6 1004 aa15.02■□□□□ -0
LGR5-203ENST00000540815 TRAK1Q9UPV9 953 aa15.02■□□□□ -0
LGR5-203ENST00000540815 IDI1Q13907 227 aa15.02□□□□□ -0.01
LGR5-203ENST00000540815 NUTM2DQ5VT03 806 aaPredicted RBP15.02□□□□□ -0.01
LGR5-203ENST00000540815 MYO5BQ9ULV0 1848 aa15.02□□□□□ -0.01
LGR5-203ENST00000540815 NPM2Q86SE8 214 aaKnown RBP15.01□□□□□ -0.01
LGR5-203ENST00000540815 ARHGEF28Q8N1W1 1705 aaKnown RBP15.01□□□□□ -0.01
LGR5-203ENST00000540815 VGFO15240 615 aaPredicted RBP15.01□□□□□ -0.01
LGR5-203ENST00000540815 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
LGR5-203ENST00000540815 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
LGR5-203ENST00000540815 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
LGR5-203ENST00000540815 ZFYVE9O95405 1425 aa15.01□□□□□ -0.01
LGR5-203ENST00000540815 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
LGR5-203ENST00000540815 REREQ9P2R6 1566 aa15□□□□□ -0.01
LGR5-203ENST00000540815 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
LGR5-203ENST00000540815 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
LGR5-203ENST00000540815 RCAN3Q9UKA8 241 aa15□□□□□ -0.01
LGR5-203ENST00000540815 RRP1P56182 461 aaKnown RBP14.99□□□□□ -0.01
LGR5-203ENST00000540815 CDCA7LQ96GN5 454 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms