RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 GNL2Q13823 731 aaKnown RBP15.92■□□□□ 0.14
SFI1-229ENST00000540643 TTLL5Q6EMB2 1281 aa15.91■□□□□ 0.14
SFI1-229ENST00000540643 GIMAP7Q8NHV1 300 aa15.91■□□□□ 0.14
SFI1-229ENST00000540643 CCAR2Q8N163 923 aaKnown RBP15.91■□□□□ 0.14
SFI1-229ENST00000540643 CHMP4CQ96CF2 233 aa15.91■□□□□ 0.14
SFI1-229ENST00000540643 FOXD4L6Q3SYB3 417 aaPredicted RBP15.9■□□□□ 0.14
SFI1-229ENST00000540643 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
SFI1-229ENST00000540643 FOXD4L3Q6VB84 417 aaPredicted RBP15.9■□□□□ 0.14
SFI1-229ENST00000540643 CENPJQ9HC77 1338 aaPredicted RBP15.9■□□□□ 0.14
SFI1-229ENST00000540643 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
SFI1-229ENST00000540643 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
SFI1-229ENST00000540643 LEKR1Q6ZMV7 388 aa15.89■□□□□ 0.13
SFI1-229ENST00000540643 C10orf67Q8IYJ2 551 aa15.89■□□□□ 0.13
SFI1-229ENST00000540643 MPHOSPH10O00566 681 aaKnown RBP15.89■□□□□ 0.13
SFI1-229ENST00000540643 ARID4AP29374 1257 aaPredicted RBP15.89■□□□□ 0.13
SFI1-229ENST00000540643 GOLGA6L4A6NEF3 574 aa15.87■□□□□ 0.13
SFI1-229ENST00000540643 CT47A1Q5JQC4 288 aaPredicted RBP15.87■□□□□ 0.13
SFI1-229ENST00000540643 MCTP1Q6DN14 999 aa15.87■□□□□ 0.13
SFI1-229ENST00000540643 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
SFI1-229ENST00000540643 PSMD1Q99460 953 aa15.86■□□□□ 0.13
SFI1-229ENST00000540643 MYCBPQ99417 103 aaPredicted RBP15.86■□□□□ 0.13
SFI1-229ENST00000540643 RSPH14Q9UHP6 348 aa15.86■□□□□ 0.13
SFI1-229ENST00000540643 KIF21BO75037 1637 aa15.85■□□□□ 0.13
SFI1-229ENST00000540643 PRXQ9BXM0 1461 aa15.85■□□□□ 0.13
SFI1-229ENST00000540643 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
SFI1-229ENST00000540643 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
SFI1-229ENST00000540643 RASSF4Q9H2L5 321 aa15.85■□□□□ 0.13
SFI1-229ENST00000540643 HMGB1P09429 215 aaKnown RBP15.84■□□□□ 0.13
SFI1-229ENST00000540643 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
SFI1-229ENST00000540643 DRC1Q96MC2 740 aa15.84■□□□□ 0.13
SFI1-229ENST00000540643 ARGLU1Q9NWB6 273 aaPredicted RBP15.84■□□□□ 0.13
SFI1-229ENST00000540643 SARNPP82979 210 aaKnown RBP15.84■□□□□ 0.13
SFI1-229ENST00000540643 PHF14O94880 888 aa15.84■□□□□ 0.13
SFI1-229ENST00000540643 PRDM4Q9UKN5 801 aa15.83■□□□□ 0.13
SFI1-229ENST00000540643 AK7Q96M32 723 aa15.83■□□□□ 0.12
SFI1-229ENST00000540643 HSPA5P11021 654 aaKnown RBP15.83■□□□□ 0.12
SFI1-229ENST00000540643 CHIC2Q9UKJ5 165 aa15.83■□□□□ 0.12
SFI1-229ENST00000540643 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
SFI1-229ENST00000540643 MNAT1P51948 309 aa15.82■□□□□ 0.12
SFI1-229ENST00000540643 CTR9Q6PD62 1173 aa15.82■□□□□ 0.12
SFI1-229ENST00000540643 CCDC112Q8NEF3 446 aa15.82■□□□□ 0.12
SFI1-229ENST00000540643 USP8P40818 1118 aa15.82■□□□□ 0.12
SFI1-229ENST00000540643 KTN1Q86UP2 1357 aaKnown RBP15.82■□□□□ 0.12
SFI1-229ENST00000540643 NOC3LQ8WTT2 800 aaKnown RBP15.81■□□□□ 0.12
SFI1-229ENST00000540643 TSC1Q92574 1164 aa15.8■□□□□ 0.12
SFI1-229ENST00000540643 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
SFI1-229ENST00000540643 PAIP2Q9BPZ3 127 aaKnown RBP15.79■□□□□ 0.12
SFI1-229ENST00000540643 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
SFI1-229ENST00000540643 LOC102724159A0A0B4J2E5 919 aa15.79■□□□□ 0.12
SFI1-229ENST00000540643 PWP2Q15269 919 aaKnown RBP15.79■□□□□ 0.12
SFI1-229ENST00000540643 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.79■□□□□ 0.12
SFI1-229ENST00000540643 U2AF2P26368 475 aaKnown RBP eCLIP15.78■□□□□ 0.125e-9■■■■■ 34.4
SFI1-229ENST00000540643 TPM4P67936 248 aa15.78■□□□□ 0.12
SFI1-229ENST00000540643 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
SFI1-229ENST00000540643 PRKRIP1Q9H875 184 aaPredicted RBP15.78■□□□□ 0.12
SFI1-229ENST00000540643 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
SFI1-229ENST00000540643 TPD52L1Q16890 204 aaPredicted RBP15.77■□□□□ 0.12
SFI1-229ENST00000540643 NOL10Q9BSC4 688 aaKnown RBP15.77■□□□□ 0.12
SFI1-229ENST00000540643 KRT222Q8N1A0 295 aa15.77■□□□□ 0.11
SFI1-229ENST00000540643 TMEM51Q9NW97 253 aa15.76■□□□□ 0.11
SFI1-229ENST00000540643 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
SFI1-229ENST00000540643 FHOD3Q2V2M9 1422 aa15.76■□□□□ 0.11
SFI1-229ENST00000540643 SPC24Q8NBT2 197 aa15.76■□□□□ 0.11
SFI1-229ENST00000540643 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
SFI1-229ENST00000540643 MRVI1Q9Y6F6 885 aa15.76■□□□□ 0.11
SFI1-229ENST00000540643 MNS1Q8NEH6 495 aa15.76■□□□□ 0.11
SFI1-229ENST00000540643 CCDC91Q7Z6B0 441 aa15.75■□□□□ 0.11
SFI1-229ENST00000540643 DNAAF4Q8WXU2 420 aa15.75■□□□□ 0.11
SFI1-229ENST00000540643 PRIMPOLQ96LW4 560 aa15.75■□□□□ 0.11
SFI1-229ENST00000540643 HSP90B2PQ58FF3 399 aa15.75■□□□□ 0.11
SFI1-229ENST00000540643 RGS22Q8NE09 1264 aa15.75■□□□□ 0.11
SFI1-229ENST00000540643 CASC1Q6TDU7 716 aa15.74■□□□□ 0.11
SFI1-229ENST00000540643 LRCH2Q5VUJ6 765 aa15.74■□□□□ 0.11
SFI1-229ENST00000540643 SLC26A8Q96RN1 970 aa15.74■□□□□ 0.11
SFI1-229ENST00000540643 POLA1P09884 1462 aaPredicted RBP15.74■□□□□ 0.11
SFI1-229ENST00000540643 HOMER1Q86YM7 354 aa15.74■□□□□ 0.11
SFI1-229ENST00000540643 C22orf23Q9BZE7 217 aa15.74■□□□□ 0.11
SFI1-229ENST00000540643 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
SFI1-229ENST00000540643 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
SFI1-229ENST00000540643 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
SFI1-229ENST00000540643 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
SFI1-229ENST00000540643 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
SFI1-229ENST00000540643 GORABQ5T7V8 394 aa15.73■□□□□ 0.11
SFI1-229ENST00000540643 NOL8Q76FK4 1167 aaKnown RBP15.73■□□□□ 0.11
SFI1-229ENST00000540643 KIF16BQ96L93 1317 aa15.72■□□□□ 0.11
SFI1-229ENST00000540643 CLSTN1O94985 981 aa15.72■□□□□ 0.11
SFI1-229ENST00000540643 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
SFI1-229ENST00000540643 ANKRD20A12PQ8NF67 263 aa15.72■□□□□ 0.11
SFI1-229ENST00000540643 CENPHQ9H3R5 247 aa15.72■□□□□ 0.11
SFI1-229ENST00000540643 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
SFI1-229ENST00000540643 PRPF40AO75400 957 aaKnown RBP15.72■□□□□ 0.11
SFI1-229ENST00000540643 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
SFI1-229ENST00000540643 TERF1P54274 439 aa15.71■□□□□ 0.11
SFI1-229ENST00000540643 TTC31Q49AM3 519 aaPredicted RBP15.71■□□□□ 0.11
SFI1-229ENST00000540643 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.11
SFI1-229ENST00000540643 ARHGAP35Q9NRY4 1499 aa15.71■□□□□ 0.11
SFI1-229ENST00000540643 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
SFI1-229ENST00000540643 CPSF2Q9P2I0 782 aaKnown RBP15.7■□□□□ 0.1
SFI1-229ENST00000540643 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
SFI1-229ENST00000540643 OGFRQ9NZT2 677 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms