RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 MYO5CQ9NQX4 1742 aa20.73■□□□□ 0.91
CACFD1-206ENST00000540581 CHGAP10645 457 aaKnown RBP20.72■□□□□ 0.91
CACFD1-206ENST00000540581 CANXP27824 592 aaKnown RBP20.72■□□□□ 0.91
CACFD1-206ENST00000540581 SLFN5Q08AF3 891 aa20.72■□□□□ 0.91
CACFD1-206ENST00000540581 RRP7AQ9Y3A4 280 aaKnown RBP20.72■□□□□ 0.91
CACFD1-206ENST00000540581 NFKBIBQ15653 356 aa20.72■□□□□ 0.91
CACFD1-206ENST00000540581 FAM161AQ3B820 660 aa20.71■□□□□ 0.91
CACFD1-206ENST00000540581 SPAG9O60271 1321 aaKnown RBP20.71■□□□□ 0.91
CACFD1-206ENST00000540581 TRAPPC8Q9Y2L5 1435 aa20.71■□□□□ 0.91
CACFD1-206ENST00000540581 C8orf34Q49A92 452 aa20.71■□□□□ 0.91
CACFD1-206ENST00000540581 FRAT1Q92837 279 aaPredicted RBP20.71■□□□□ 0.91
CACFD1-206ENST00000540581 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
CACFD1-206ENST00000540581 KIF3BO15066 747 aa20.68■□□□□ 0.9
CACFD1-206ENST00000540581 CDCA8Q53HL2 280 aa20.68■□□□□ 0.9
CACFD1-206ENST00000540581 UNC13BO14795 1591 aa20.68■□□□□ 0.9
CACFD1-206ENST00000540581 PANK1Q8TE04 598 aa20.68■□□□□ 0.9
CACFD1-206ENST00000540581 ANO8Q9HCE9 1232 aaPredicted RBP20.68■□□□□ 0.9
CACFD1-206ENST00000540581 BRPF3Q9ULD4 1205 aa20.68■□□□□ 0.9
CACFD1-206ENST00000540581 COG6Q9Y2V7 657 aa20.68■□□□□ 0.9
CACFD1-206ENST00000540581 ZNF521Q96K83 1311 aa20.67■□□□□ 0.9
CACFD1-206ENST00000540581 IGHDP01880 384 aa20.67■□□□□ 0.9
CACFD1-206ENST00000540581 BCL2L13Q9BXK5 485 aa20.66■□□□□ 0.9
CACFD1-206ENST00000540581 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
CACFD1-206ENST00000540581 DUOX2Q9NRD8 1548 aa20.65■□□□□ 0.9
CACFD1-206ENST00000540581 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
CACFD1-206ENST00000540581 EIF2AK4Q9P2K8 1649 aaKnown RBP20.65■□□□□ 0.9
CACFD1-206ENST00000540581 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.9
CACFD1-206ENST00000540581 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
CACFD1-206ENST00000540581 FRAT2O75474 233 aaPredicted RBP20.63■□□□□ 0.89
CACFD1-206ENST00000540581 CHD1O14646 1710 aa20.62■□□□□ 0.89
CACFD1-206ENST00000540581 MAST1Q9Y2H9 1570 aa20.62■□□□□ 0.89
CACFD1-206ENST00000540581 GSE1Q14687 1217 aa20.61■□□□□ 0.89
CACFD1-206ENST00000540581 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
CACFD1-206ENST00000540581 TNNQ9UQP3 1299 aa20.6■□□□□ 0.89
CACFD1-206ENST00000540581 ASXL1Q8IXJ9 1541 aa20.6■□□□□ 0.89
CACFD1-206ENST00000540581 CLUAP1Q96AJ1 413 aa20.6■□□□□ 0.89
CACFD1-206ENST00000540581 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.6■□□□□ 0.89
CACFD1-206ENST00000540581 TRAK1Q9UPV9 953 aa20.6■□□□□ 0.89
CACFD1-206ENST00000540581 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
CACFD1-206ENST00000540581 SEC24BO95487 1268 aa20.59■□□□□ 0.89
CACFD1-206ENST00000540581 PLCH2O75038 1416 aa20.58■□□□□ 0.88
CACFD1-206ENST00000540581 E9PSI1 815 aa20.58■□□□□ 0.88
CACFD1-206ENST00000540581 INSRP06213 1382 aa20.57■□□□□ 0.88
CACFD1-206ENST00000540581 LAMC1P11047 1609 aa20.57■□□□□ 0.88
CACFD1-206ENST00000540581 ATP10AO60312 1499 aa20.57■□□□□ 0.88
CACFD1-206ENST00000540581 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
CACFD1-206ENST00000540581 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
CACFD1-206ENST00000540581 SLC12A5Q9H2X9 1139 aa20.56■□□□□ 0.88
CACFD1-206ENST00000540581 MORC1Q86VD1 984 aa20.56■□□□□ 0.88
CACFD1-206ENST00000540581 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
CACFD1-206ENST00000540581 MADDQ8WXG6 1647 aa20.55■□□□□ 0.88
CACFD1-206ENST00000540581 TMEM132EQ6IEE7 984 aa20.55■□□□□ 0.88
CACFD1-206ENST00000540581 PLXNC1O60486 1568 aa20.55■□□□□ 0.88
CACFD1-206ENST00000540581 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
CACFD1-206ENST00000540581 WWC1Q8IX03 1113 aa20.55■□□□□ 0.88
CACFD1-206ENST00000540581 EIF3AQ14152 1382 aaKnown RBP20.54■□□□□ 0.88
CACFD1-206ENST00000540581 TRMT2AQ8IZ69 625 aaKnown RBP20.54■□□□□ 0.88
CACFD1-206ENST00000540581 ARXQ96QS3 562 aa20.53■□□□□ 0.88
CACFD1-206ENST00000540581 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
CACFD1-206ENST00000540581 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
CACFD1-206ENST00000540581 RNF17Q9BXT8 1623 aaKnown RBP20.52■□□□□ 0.87
CACFD1-206ENST00000540581 SPRYD3Q8NCJ5 442 aa20.52■□□□□ 0.87
CACFD1-206ENST00000540581 ABCC2Q92887 1545 aa20.52■□□□□ 0.87
CACFD1-206ENST00000540581 SCAPERQ9BY12 1400 aa20.51■□□□□ 0.87
CACFD1-206ENST00000540581 KANK1Q14678 1352 aa20.5■□□□□ 0.87
CACFD1-206ENST00000540581 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
CACFD1-206ENST00000540581 TCP11L2Q8N4U5 519 aa20.49■□□□□ 0.87
CACFD1-206ENST00000540581 RLBP1P12271 317 aa20.48■□□□□ 0.87
CACFD1-206ENST00000540581 SYNMO15061 1565 aa20.48■□□□□ 0.87
CACFD1-206ENST00000540581 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
CACFD1-206ENST00000540581 MTHFSP49914 203 aa20.46■□□□□ 0.87
CACFD1-206ENST00000540581 GGT6Q6P531 493 aa20.46■□□□□ 0.87
CACFD1-206ENST00000540581 ERVK-7P63135 1459 aa20.46■□□□□ 0.87
CACFD1-206ENST00000540581 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
CACFD1-206ENST00000540581 PCDHB15Q9Y5E8 787 aa20.46■□□□□ 0.87
CACFD1-206ENST00000540581 ABCC1P33527 1531 aa20.46■□□□□ 0.87
CACFD1-206ENST00000540581 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
CACFD1-206ENST00000540581 TRPM2O94759 1503 aa20.44■□□□□ 0.86
CACFD1-206ENST00000540581 USP19O94966 1318 aa20.44■□□□□ 0.86
CACFD1-206ENST00000540581 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
CACFD1-206ENST00000540581 MYOM1P52179 1685 aa20.42■□□□□ 0.86
CACFD1-206ENST00000540581 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
CACFD1-206ENST00000540581 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
CACFD1-206ENST00000540581 PDE3AQ14432 1141 aa20.42■□□□□ 0.86
CACFD1-206ENST00000540581 PTPRTO14522 1441 aa20.41■□□□□ 0.86
CACFD1-206ENST00000540581 RUNDC1Q96C34 613 aa20.41■□□□□ 0.86
CACFD1-206ENST00000540581 TSR2Q969E8 191 aaKnown RBP20.4■□□□□ 0.86
CACFD1-206ENST00000540581 POGKQ9P215 609 aa20.4■□□□□ 0.86
CACFD1-206ENST00000540581 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
CACFD1-206ENST00000540581 SPHKAPQ2M3C7 1700 aa20.4■□□□□ 0.86
CACFD1-206ENST00000540581 PDZRN3Q9UPQ7 1066 aa20.4■□□□□ 0.86
CACFD1-206ENST00000540581 KDM5AP29375 1690 aaKnown RBP20.4■□□□□ 0.86
CACFD1-206ENST00000540581 NOS1P29475 1434 aa20.4■□□□□ 0.86
CACFD1-206ENST00000540581 NPC1L1Q9UHC9 1359 aa20.39■□□□□ 0.86
CACFD1-206ENST00000540581 U2SURPO15042 1029 aaKnown RBP20.39■□□□□ 0.85
CACFD1-206ENST00000540581 ZFYVE16Q7Z3T8 1539 aa20.37■□□□□ 0.85
CACFD1-206ENST00000540581 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
CACFD1-206ENST00000540581 CFAP65Q6ZU64 1925 aaKnown RBP20.37■□□□□ 0.85
CACFD1-206ENST00000540581 CABP2Q9NPB3 220 aa20.36■□□□□ 0.85
CACFD1-206ENST00000540581 STK26Q9P289 416 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms