RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PARD3Q8TEW0 1356 aa15.54■□□□□ 0.08
C11orf54-214ENST00000540113 ERICH6BQ5W0A0 696 aa15.54■□□□□ 0.08
C11orf54-214ENST00000540113 BRD4O60885 1362 aaPredicted RBP15.53■□□□□ 0.08
C11orf54-214ENST00000540113 PANK3Q9H999 370 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 ABCA6Q8N139 1617 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 KIF1BO60333 1816 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 ANP32EQ9BTT0 268 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 KIAA1210Q9ULL0 1709 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 NEO1Q92859 1461 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 MLH3Q9UHC1 1453 aa15.53■□□□□ 0.08
C11orf54-214ENST00000540113 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.08
C11orf54-214ENST00000540113 MYT1Q01538 1121 aa15.52■□□□□ 0.07
C11orf54-214ENST00000540113 MAP3K4Q9Y6R4 1608 aa15.51■□□□□ 0.07
C11orf54-214ENST00000540113 SCAF11Q99590 1463 aaKnown RBP15.51■□□□□ 0.07
C11orf54-214ENST00000540113 MSH5O43196 834 aa15.5■□□□□ 0.07
C11orf54-214ENST00000540113 TMF1P82094 1093 aa15.5■□□□□ 0.07
C11orf54-214ENST00000540113 MYOM2P54296 1465 aa15.49■□□□□ 0.07
C11orf54-214ENST00000540113 NLRP13Q86W25 1043 aa15.48■□□□□ 0.07
C11orf54-214ENST00000540113 STAC3Q96MF2 364 aa15.48■□□□□ 0.07
C11orf54-214ENST00000540113 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
C11orf54-214ENST00000540113 MYOM1P52179 1685 aa15.46■□□□□ 0.07
C11orf54-214ENST00000540113 NPATQ14207 1427 aa15.46■□□□□ 0.07
C11orf54-214ENST00000540113 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 ADGRF5Q8IZF2 1346 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 DIP2BQ9P265 1576 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 CFAP65Q6ZU64 1925 aaKnown RBP15.45■□□□□ 0.06
C11orf54-214ENST00000540113 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 ABCC3O15438 1527 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 DIP2CQ9Y2E4 1556 aa15.45■□□□□ 0.06
C11orf54-214ENST00000540113 SYNMO15061 1565 aa15.44■□□□□ 0.06
C11orf54-214ENST00000540113 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
C11orf54-214ENST00000540113 RICTORQ6R327 1708 aa15.44■□□□□ 0.06
C11orf54-214ENST00000540113 ADRA2BP18089 450 aa15.44■□□□□ 0.06
C11orf54-214ENST00000540113 CCDC136Q96JN2 1154 aa15.44■□□□□ 0.06
C11orf54-214ENST00000540113 SIGLEC1Q9BZZ2 1709 aa15.43■□□□□ 0.06
C11orf54-214ENST00000540113 RAPGEF3O95398 923 aa15.43■□□□□ 0.06
C11orf54-214ENST00000540113 CFAP70Q5T0N1 1121 aa15.43■□□□□ 0.06
C11orf54-214ENST00000540113 CAMSAP1Q5T5Y3 1602 aa15.42■□□□□ 0.06
C11orf54-214ENST00000540113 PPLO60437 1756 aa15.42■□□□□ 0.06
C11orf54-214ENST00000540113 GGT6Q6P531 493 aa15.41■□□□□ 0.06
C11orf54-214ENST00000540113 KDM5AP29375 1690 aaKnown RBP15.4■□□□□ 0.06
C11orf54-214ENST00000540113 NOS1P29475 1434 aa15.4■□□□□ 0.06
C11orf54-214ENST00000540113 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
C11orf54-214ENST00000540113 MYO3AQ8NEV4 1616 aa15.39■□□□□ 0.05
C11orf54-214ENST00000540113 ERVK-7P63135 1459 aa15.38■□□□□ 0.05
C11orf54-214ENST00000540113 EXOC6Q8TAG9 804 aa15.38■□□□□ 0.05
C11orf54-214ENST00000540113 RCAN3Q9UKA8 241 aa15.38■□□□□ 0.05
C11orf54-214ENST00000540113 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
C11orf54-214ENST00000540113 PIK3C2BO00750 1634 aa15.37■□□□□ 0.05
C11orf54-214ENST00000540113 FANCIQ9NVI1 1328 aa15.37■□□□□ 0.05
C11orf54-214ENST00000540113 SETBP1Q9Y6X0 1596 aa15.37■□□□□ 0.05
C11orf54-214ENST00000540113 YEATS2Q9ULM3 1422 aa15.36■□□□□ 0.05
C11orf54-214ENST00000540113 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
C11orf54-214ENST00000540113 BLMP54132 1417 aaPredicted RBP15.36■□□□□ 0.05
C11orf54-214ENST00000540113 PLIN1O60240 522 aa15.36■□□□□ 0.05
C11orf54-214ENST00000540113 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
C11orf54-214ENST00000540113 ADAMTS8Q9UP79 889 aa15.36■□□□□ 0.05
C11orf54-214ENST00000540113 PIK3C2GO75747 1445 aa15.35■□□□□ 0.05
C11orf54-214ENST00000540113 CDCA8Q53HL2 280 aa15.35■□□□□ 0.05
C11orf54-214ENST00000540113 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
C11orf54-214ENST00000540113 CHGAP10645 457 aaKnown RBP15.35■□□□□ 0.05
C11orf54-214ENST00000540113 ZMYM4Q5VZL5 1548 aa15.35■□□□□ 0.05
C11orf54-214ENST00000540113 ZC3H13Q5T200 1668 aaKnown RBP15.34■□□□□ 0.05
C11orf54-214ENST00000540113 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
C11orf54-214ENST00000540113 PPP2R1AP30153 589 aa15.34■□□□□ 0.05
C11orf54-214ENST00000540113 INSRP06213 1382 aa15.33■□□□□ 0.04
C11orf54-214ENST00000540113 SBNO2Q9Y2G9 1366 aa15.31■□□□□ 0.04
C11orf54-214ENST00000540113 QRICH2Q9H0J4 1663 aa15.31■□□□□ 0.04
C11orf54-214ENST00000540113 NEXMIFQ5QGS0 1516 aa15.31■□□□□ 0.04
C11orf54-214ENST00000540113 PDE3BQ13370 1112 aa15.3■□□□□ 0.04
C11orf54-214ENST00000540113 ARHGAP31Q2M1Z3 1444 aa15.3■□□□□ 0.04
C11orf54-214ENST00000540113 C14orf93Q9H972 538 aaKnown RBP15.29■□□□□ 0.04
C11orf54-214ENST00000540113 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
C11orf54-214ENST00000540113 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
C11orf54-214ENST00000540113 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
C11orf54-214ENST00000540113 RPGRIP1LQ68CZ1 1315 aa15.28■□□□□ 0.04
C11orf54-214ENST00000540113 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
C11orf54-214ENST00000540113 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
C11orf54-214ENST00000540113 CENPJQ9HC77 1338 aaPredicted RBP15.27■□□□□ 0.04
C11orf54-214ENST00000540113 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.04
C11orf54-214ENST00000540113 PREX1Q8TCU6 1659 aa15.27■□□□□ 0.04
C11orf54-214ENST00000540113 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.03
C11orf54-214ENST00000540113 NUTM2DQ5VT03 806 aaPredicted RBP15.26■□□□□ 0.03
C11orf54-214ENST00000540113 CARD14Q9BXL6 1004 aa15.26■□□□□ 0.03
C11orf54-214ENST00000540113 PLEKHH1Q9ULM0 1364 aa15.26■□□□□ 0.03
C11orf54-214ENST00000540113 TMEM132EQ6IEE7 984 aa15.26■□□□□ 0.03
C11orf54-214ENST00000540113 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
C11orf54-214ENST00000540113 TSPOAP1O95153 1857 aa15.26■□□□□ 0.03
C11orf54-214ENST00000540113 ARHGEF28Q8N1W1 1705 aaKnown RBP15.25■□□□□ 0.03
C11orf54-214ENST00000540113 SKAP1Q86WV1 359 aa15.25■□□□□ 0.03
C11orf54-214ENST00000540113 C20orf194Q5TEA3 1177 aa15.24■□□□□ 0.03
C11orf54-214ENST00000540113 CRBNQ96SW2 442 aa15.24■□□□□ 0.03
C11orf54-214ENST00000540113 IDI1Q13907 227 aa15.23■□□□□ 0.03
C11orf54-214ENST00000540113 TMEM131LA2VDJ0 1609 aa15.23■□□□□ 0.03
C11orf54-214ENST00000540113 TULP4Q9NRJ4 1543 aa15.2■□□□□ 0.02
C11orf54-214ENST00000540113 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
C11orf54-214ENST00000540113 TNNT2P45379 298 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms