RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.56
LRTOMT-217ENST00000539587 ADGRB3O60242 1522 aa11.52□□□□□ -0.57
LRTOMT-217ENST00000539587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.52□□□□□ -0.57
LRTOMT-217ENST00000539587 MSH6P52701 1360 aa11.52□□□□□ -0.57
LRTOMT-217ENST00000539587 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.57
LRTOMT-217ENST00000539587 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
LRTOMT-217ENST00000539587 TBX22Q9Y458 520 aa11.51□□□□□ -0.57
LRTOMT-217ENST00000539587 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
LRTOMT-217ENST00000539587 PLEKHG1Q9ULL1 1385 aa11.51□□□□□ -0.57
LRTOMT-217ENST00000539587 AHDC1Q5TGY3 1603 aaPredicted RBP11.5□□□□□ -0.57
LRTOMT-217ENST00000539587 SHPRHQ149N8 1683 aa11.5□□□□□ -0.57
LRTOMT-217ENST00000539587 KANK1Q14678 1352 aa11.5□□□□□ -0.57
LRTOMT-217ENST00000539587 DAPK1P53355 1430 aa11.5□□□□□ -0.57
LRTOMT-217ENST00000539587 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.49□□□□□ -0.57
LRTOMT-217ENST00000539587 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
LRTOMT-217ENST00000539587 DIP2AQ14689 1571 aa11.49□□□□□ -0.57
LRTOMT-217ENST00000539587 TMEM131LA2VDJ0 1609 aa11.49□□□□□ -0.57
LRTOMT-217ENST00000539587 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
LRTOMT-217ENST00000539587 CDK12Q9NYV4 1490 aaPredicted RBP11.47□□□□□ -0.57
LRTOMT-217ENST00000539587 ADAMTS13Q76LX8 1427 aa11.47□□□□□ -0.57
LRTOMT-217ENST00000539587 EP400Q96L91 3159 aa11.47□□□□□ -0.57
LRTOMT-217ENST00000539587 RPRD2Q5VT52 1461 aaKnown RBP11.46□□□□□ -0.57
LRTOMT-217ENST00000539587 C19orf44Q9H6X5 657 aa11.46□□□□□ -0.57
LRTOMT-217ENST00000539587 RIMS2Q9UQ26 1411 aa11.45□□□□□ -0.58
LRTOMT-217ENST00000539587 RXRBP28702 533 aa11.45□□□□□ -0.58
LRTOMT-217ENST00000539587 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
LRTOMT-217ENST00000539587 PIK3R4Q99570 1358 aa11.44□□□□□ -0.58
LRTOMT-217ENST00000539587 ANKRD30AQ9BXX3 1397 aa11.44□□□□□ -0.58
LRTOMT-217ENST00000539587 BRINP3Q76B58 766 aa11.44□□□□□ -0.58
LRTOMT-217ENST00000539587 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
LRTOMT-217ENST00000539587 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
LRTOMT-217ENST00000539587 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
LRTOMT-217ENST00000539587 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
LRTOMT-217ENST00000539587 HDGFP51858 240 aaKnown RBP11.43□□□□□ -0.58
LRTOMT-217ENST00000539587 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
LRTOMT-217ENST00000539587 LOC105371045A0A1W2PR82 267 aa11.42□□□□□ -0.58
LRTOMT-217ENST00000539587 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
LRTOMT-217ENST00000539587 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.41□□□□□ -0.58
LRTOMT-217ENST00000539587 BCANQ96GW7 911 aa11.41□□□□□ -0.58
LRTOMT-217ENST00000539587 AFF2P51816 1311 aa11.4□□□□□ -0.58
LRTOMT-217ENST00000539587 NHSL1Q5SYE7 1610 aa11.4□□□□□ -0.58
LRTOMT-217ENST00000539587 MEX3CQ5U5Q3 659 aaKnown RBP11.4□□□□□ -0.58
LRTOMT-217ENST00000539587 ATF3P18847 181 aa11.39□□□□□ -0.59
LRTOMT-217ENST00000539587 AMOTL2Q9Y2J4 779 aa11.39□□□□□ -0.59
LRTOMT-217ENST00000539587 DCCP43146 1447 aa11.38□□□□□ -0.59
LRTOMT-217ENST00000539587 ANKRD50Q9ULJ7 1429 aa11.38□□□□□ -0.59
LRTOMT-217ENST00000539587 E9PCH4 1651 aa11.38□□□□□ -0.59
LRTOMT-217ENST00000539587 NRXN3Q9Y4C0 1643 aa11.38□□□□□ -0.59
LRTOMT-217ENST00000539587 UNC13BO14795 1591 aa11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 RGS12O14924 1447 aa11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 MST1RQ04912 1400 aa11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 ASXL1Q8IXJ9 1541 aa11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 RBM6P78332 1123 aaKnown RBP11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 QTRT2Q9H974 415 aaKnown RBP11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 XRN1Q8IZH2 1706 aaKnown RBP11.37□□□□□ -0.59
LRTOMT-217ENST00000539587 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
LRTOMT-217ENST00000539587 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
LRTOMT-217ENST00000539587 PPP1R15AO75807 674 aaPredicted RBP11.36□□□□□ -0.59
LRTOMT-217ENST00000539587 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
LRTOMT-217ENST00000539587 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
LRTOMT-217ENST00000539587 TRPM2O94759 1503 aa11.35□□□□□ -0.59
LRTOMT-217ENST00000539587 LAMC1P11047 1609 aa11.35□□□□□ -0.59
LRTOMT-217ENST00000539587 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
LRTOMT-217ENST00000539587 PNPLA6Q8IY17 1366 aa11.35□□□□□ -0.59
LRTOMT-217ENST00000539587 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.6
LRTOMT-217ENST00000539587 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
LRTOMT-217ENST00000539587 METP08581 1390 aa11.32□□□□□ -0.6
LRTOMT-217ENST00000539587 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
LRTOMT-217ENST00000539587 C8orf37Q96NL8 207 aa11.31□□□□□ -0.6
LRTOMT-217ENST00000539587 CHGAP10645 457 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-217ENST00000539587 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
LRTOMT-217ENST00000539587 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
LRTOMT-217ENST00000539587 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
LRTOMT-217ENST00000539587 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
LRTOMT-217ENST00000539587 C1orf167Q5SNV9 1468 aa11.28□□□□□ -0.6
LRTOMT-217ENST00000539587 NGLY1Q96IV0 654 aa11.28□□□□□ -0.6
LRTOMT-217ENST00000539587 ROCK1Q13464 1354 aa11.27□□□□□ -0.61
LRTOMT-217ENST00000539587 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
LRTOMT-217ENST00000539587 ATRNO75882 1429 aa11.26□□□□□ -0.61
LRTOMT-217ENST00000539587 COL22A1Q8NFW1 1626 aaPredicted RBP11.26□□□□□ -0.61
LRTOMT-217ENST00000539587 ADAMTS2O95450 1211 aa11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 APLP2Q06481 763 aa11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 CCDC125Q86Z20 511 aa11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 ORAI2Q96SN7 254 aa11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 USP21Q9UK80 565 aa11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 TRPC5Q9UL62 973 aaPredicted RBP11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 BCL9LQ86UU0 1499 aa11.25□□□□□ -0.61
LRTOMT-217ENST00000539587 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
LRTOMT-217ENST00000539587 NUP155O75694 1391 aa11.24□□□□□ -0.61
LRTOMT-217ENST00000539587 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
LRTOMT-217ENST00000539587 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
LRTOMT-217ENST00000539587 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
LRTOMT-217ENST00000539587 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
LRTOMT-217ENST00000539587 MYOM2P54296 1465 aa11.22□□□□□ -0.61
LRTOMT-217ENST00000539587 ROBO2Q9HCK4 1378 aa11.21□□□□□ -0.61
LRTOMT-217ENST00000539587 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-217ENST00000539587 CLTCL1P53675 1640 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms