RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 CHGAP10645 457 aaKnown RBP14.38□□□□□ -0.11
LDHA-216ENST00000538451 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
LDHA-216ENST00000538451 ERVK-7P63135 1459 aa14.37□□□□□ -0.11
LDHA-216ENST00000538451 MYO3AQ8NEV4 1616 aa14.37□□□□□ -0.11
LDHA-216ENST00000538451 ZNF326Q5BKZ1 582 aaKnown RBP14.37□□□□□ -0.11
LDHA-216ENST00000538451 DCAF11Q8TEB1 546 aa14.37□□□□□ -0.11
LDHA-216ENST00000538451 KIF1BO60333 1816 aa14.37□□□□□ -0.11
LDHA-216ENST00000538451 RPGRIP1LQ68CZ1 1315 aa14.36□□□□□ -0.11
LDHA-216ENST00000538451 TNRQ92752 1358 aa14.36□□□□□ -0.11
LDHA-216ENST00000538451 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
LDHA-216ENST00000538451 HDGFP51858 240 aaKnown RBP14.35□□□□□ -0.11
LDHA-216ENST00000538451 FKBP8Q14318 412 aa14.35□□□□□ -0.11
LDHA-216ENST00000538451 FBXO31Q5XUX0 539 aaPredicted RBP14.35□□□□□ -0.11
LDHA-216ENST00000538451 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
LDHA-216ENST00000538451 CLTCL1P53675 1640 aa14.35□□□□□ -0.11
LDHA-216ENST00000538451 ZNF142P52746 1687 aaPredicted RBP14.34□□□□□ -0.11
LDHA-216ENST00000538451 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
LDHA-216ENST00000538451 A2ML1A8K2U0 1454 aa14.33□□□□□ -0.12
LDHA-216ENST00000538451 IDI1Q13907 227 aa14.33□□□□□ -0.12
LDHA-216ENST00000538451 KDM2AQ9Y2K7 1162 aa14.33□□□□□ -0.12
LDHA-216ENST00000538451 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
LDHA-216ENST00000538451 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
LDHA-216ENST00000538451 NLRP1Q9C000 1473 aa14.32□□□□□ -0.12
LDHA-216ENST00000538451 PIK3C2BO00750 1634 aa14.31□□□□□ -0.12
LDHA-216ENST00000538451 SYNMO15061 1565 aa14.3□□□□□ -0.12
LDHA-216ENST00000538451 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
LDHA-216ENST00000538451 ADGRB3O60242 1522 aa14.28□□□□□ -0.12
LDHA-216ENST00000538451 MYCNP04198 464 aaPredicted RBP14.28□□□□□ -0.12
LDHA-216ENST00000538451 THEMISQ8N1K5 641 aaPredicted RBP14.28□□□□□ -0.12
LDHA-216ENST00000538451 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
LDHA-216ENST00000538451 UGGT1Q9NYU2 1555 aa14.28□□□□□ -0.12
LDHA-216ENST00000538451 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.12
LDHA-216ENST00000538451 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.13
LDHA-216ENST00000538451 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
LDHA-216ENST00000538451 MYOM2P54296 1465 aa14.25□□□□□ -0.13
LDHA-216ENST00000538451 KDM5AP29375 1690 aaKnown RBP14.25□□□□□ -0.13
LDHA-216ENST00000538451 FBXO41Q8TF61 875 aa14.24□□□□□ -0.13
LDHA-216ENST00000538451 TMEM131LA2VDJ0 1609 aa14.23□□□□□ -0.13
LDHA-216ENST00000538451 EIF4G2P78344 907 aaKnown RBP eCLIP14.23□□□□□ -0.13
LDHA-216ENST00000538451 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
LDHA-216ENST00000538451 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
LDHA-216ENST00000538451 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
LDHA-216ENST00000538451 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
LDHA-216ENST00000538451 EID1Q9Y6B2 187 aa14.22□□□□□ -0.13
LDHA-216ENST00000538451 ZFYVE9O95405 1425 aa14.21□□□□□ -0.13
LDHA-216ENST00000538451 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
LDHA-216ENST00000538451 NBPF8Q3BBV2 869 aa14.21□□□□□ -0.13
LDHA-216ENST00000538451 CARD11Q9BXL7 1154 aa14.21□□□□□ -0.13
LDHA-216ENST00000538451 RALGAPBQ86X10 1494 aa14.21□□□□□ -0.14
LDHA-216ENST00000538451 POLR1AO95602 1720 aaPredicted RBP14.19□□□□□ -0.14
LDHA-216ENST00000538451 PPLO60437 1756 aa14.18□□□□□ -0.14
LDHA-216ENST00000538451 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
LDHA-216ENST00000538451 NEXMIFQ5QGS0 1516 aa14.18□□□□□ -0.14
LDHA-216ENST00000538451 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
LDHA-216ENST00000538451 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
LDHA-216ENST00000538451 ADGRF5Q8IZF2 1346 aa14.17□□□□□ -0.14
LDHA-216ENST00000538451 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
LDHA-216ENST00000538451 BCANQ96GW7 911 aa14.16□□□□□ -0.14
LDHA-216ENST00000538451 UBR1Q8IWV7 1749 aa14.16□□□□□ -0.14
LDHA-216ENST00000538451 KIAA1210Q9ULL0 1709 aa14.16□□□□□ -0.14
LDHA-216ENST00000538451 EIF3AQ14152 1382 aaKnown RBP14.16□□□□□ -0.14
LDHA-216ENST00000538451 MED14O60244 1454 aa14.16□□□□□ -0.14
LDHA-216ENST00000538451 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
LDHA-216ENST00000538451 TRPM1Q7Z4N2 1603 aa14.15□□□□□ -0.14
LDHA-216ENST00000538451 LTBP4Q8N2S1 1624 aa14.15□□□□□ -0.14
LDHA-216ENST00000538451 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.14
LDHA-216ENST00000538451 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
LDHA-216ENST00000538451 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.15
LDHA-216ENST00000538451 GPRASP1Q5JY77 1395 aa14.14□□□□□ -0.15
LDHA-216ENST00000538451 LAMC1P11047 1609 aa14.14□□□□□ -0.15
LDHA-216ENST00000538451 TXNDC2Q86VQ3 553 aa14.14□□□□□ -0.15
LDHA-216ENST00000538451 SLIT1O75093 1534 aa14.14□□□□□ -0.15
LDHA-216ENST00000538451 IQSEC2Q5JU85 1478 aa14.13□□□□□ -0.15
LDHA-216ENST00000538451 SCAF11Q99590 1463 aaKnown RBP14.13□□□□□ -0.15
LDHA-216ENST00000538451 MYO5BQ9ULV0 1848 aa14.13□□□□□ -0.15
LDHA-216ENST00000538451 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
LDHA-216ENST00000538451 USP47Q96K76 1375 aa14.12□□□□□ -0.15
LDHA-216ENST00000538451 ARHGAP23Q9P227 1491 aa14.12□□□□□ -0.15
LDHA-216ENST00000538451 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
LDHA-216ENST00000538451 CFAP70Q5T0N1 1121 aa14.12□□□□□ -0.15
LDHA-216ENST00000538451 IQGAP1P46940 1657 aa14.11□□□□□ -0.15
LDHA-216ENST00000538451 SETBP1Q9Y6X0 1596 aa14.11□□□□□ -0.15
LDHA-216ENST00000538451 NBPF1Q3BBV0 1214 aa14.11□□□□□ -0.15
LDHA-216ENST00000538451 LTKP29376 864 aa14.1□□□□□ -0.15
LDHA-216ENST00000538451 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
LDHA-216ENST00000538451 CPS1P31327 1500 aa14.09□□□□□ -0.15
LDHA-216ENST00000538451 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
LDHA-216ENST00000538451 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
LDHA-216ENST00000538451 ALKQ9UM73 1620 aa14.04□□□□□ -0.16
LDHA-216ENST00000538451 TMF1P82094 1093 aa14.04□□□□□ -0.16
LDHA-216ENST00000538451 TBX22Q9Y458 520 aa14.04□□□□□ -0.16
LDHA-216ENST00000538451 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
LDHA-216ENST00000538451 TRAK1Q9UPV9 953 aa14.03□□□□□ -0.16
LDHA-216ENST00000538451 DIP2AQ14689 1571 aa14.03□□□□□ -0.16
LDHA-216ENST00000538451 TMEM132EQ6IEE7 984 aa14.02□□□□□ -0.17
LDHA-216ENST00000538451 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
LDHA-216ENST00000538451 UBAP1LF5GYI3 381 aa14.01□□□□□ -0.17
LDHA-216ENST00000538451 POGKQ9P215 609 aa14.01□□□□□ -0.17
LDHA-216ENST00000538451 PIK3R4Q99570 1358 aa14.01□□□□□ -0.17
LDHA-216ENST00000538451 YTHDC2Q9H6S0 1430 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms