RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ZNF326Q5BKZ1 582 aaKnown RBP17.54■□□□□ 0.4
DDB1-209ENST00000537877 A2ML1A8K2U0 1454 aa17.52■□□□□ 0.4
DDB1-209ENST00000537877 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
DDB1-209ENST00000537877 GPRASP1Q5JY77 1395 aa17.51■□□□□ 0.39
DDB1-209ENST00000537877 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
DDB1-209ENST00000537877 UBR1Q8IWV7 1749 aa17.5■□□□□ 0.39
DDB1-209ENST00000537877 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
DDB1-209ENST00000537877 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
DDB1-209ENST00000537877 PIK3C2GO75747 1445 aa17.48■□□□□ 0.39
DDB1-209ENST00000537877 CEBPAP49715 358 aaPredicted RBP17.48■□□□□ 0.39
DDB1-209ENST00000537877 EIF4G2P78344 907 aaKnown RBP eCLIP17.47■□□□□ 0.39
DDB1-209ENST00000537877 ZNF142P52746 1687 aaPredicted RBP17.46■□□□□ 0.39
DDB1-209ENST00000537877 VGFO15240 615 aaPredicted RBP17.46■□□□□ 0.39
DDB1-209ENST00000537877 ADGRF5Q8IZF2 1346 aa17.45■□□□□ 0.38
DDB1-209ENST00000537877 SETBP1Q9Y6X0 1596 aa17.45■□□□□ 0.38
DDB1-209ENST00000537877 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
DDB1-209ENST00000537877 PTPRMP28827 1452 aa17.44■□□□□ 0.38
DDB1-209ENST00000537877 RIMS2Q9UQ26 1411 aa17.44■□□□□ 0.38
DDB1-209ENST00000537877 CEP170BQ9Y4F5 1589 aaPredicted RBP17.44■□□□□ 0.38
DDB1-209ENST00000537877 USP47Q96K76 1375 aa17.44■□□□□ 0.38
DDB1-209ENST00000537877 IQGAP1P46940 1657 aa17.43■□□□□ 0.38
DDB1-209ENST00000537877 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
DDB1-209ENST00000537877 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.4■□□□□ 0.38
DDB1-209ENST00000537877 SLIT1O75093 1534 aa17.4■□□□□ 0.38
DDB1-209ENST00000537877 TMEM2Q9UHN6 1383 aa17.4■□□□□ 0.38
DDB1-209ENST00000537877 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
DDB1-209ENST00000537877 NBPF1Q3BBV0 1214 aa17.4■□□□□ 0.38
DDB1-209ENST00000537877 ARHGAP23Q9P227 1491 aa17.39■□□□□ 0.37
DDB1-209ENST00000537877 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
DDB1-209ENST00000537877 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
DDB1-209ENST00000537877 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
DDB1-209ENST00000537877 ADGRB1O14514 1584 aa17.38■□□□□ 0.37
DDB1-209ENST00000537877 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
DDB1-209ENST00000537877 C14orf93Q9H972 538 aaKnown RBP17.38■□□□□ 0.37
DDB1-209ENST00000537877 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
DDB1-209ENST00000537877 ALKQ9UM73 1620 aa17.34■□□□□ 0.37
DDB1-209ENST00000537877 NRXN3Q9Y4C0 1643 aa17.34■□□□□ 0.37
DDB1-209ENST00000537877 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
DDB1-209ENST00000537877 SETD1AO15047 1707 aaKnown RBP17.34■□□□□ 0.37
DDB1-209ENST00000537877 NUTM2DQ5VT03 806 aaPredicted RBP17.34■□□□□ 0.37
DDB1-209ENST00000537877 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
DDB1-209ENST00000537877 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.37
DDB1-209ENST00000537877 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
DDB1-209ENST00000537877 PLEKHG1Q9ULL1 1385 aa17.32■□□□□ 0.36
DDB1-209ENST00000537877 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
DDB1-209ENST00000537877 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
DDB1-209ENST00000537877 ARHGEF28Q8N1W1 1705 aaKnown RBP17.29■□□□□ 0.36
DDB1-209ENST00000537877 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
DDB1-209ENST00000537877 CCDC7Q96M83 1385 aa17.27■□□□□ 0.35
DDB1-209ENST00000537877 KDM4FA0A1W2PPD8 638 aa17.26■□□□□ 0.35
DDB1-209ENST00000537877 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
DDB1-209ENST00000537877 TXNDC2Q86VQ3 553 aa17.26■□□□□ 0.35
DDB1-209ENST00000537877 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
DDB1-209ENST00000537877 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
DDB1-209ENST00000537877 YTHDC2Q9H6S0 1430 aaKnown RBP17.25■□□□□ 0.35
DDB1-209ENST00000537877 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
DDB1-209ENST00000537877 WASHC2AQ641Q2 1341 aa17.25■□□□□ 0.35
DDB1-209ENST00000537877 LTKP29376 864 aa17.25■□□□□ 0.35
DDB1-209ENST00000537877 DLC1Q96QB1 1528 aa17.24■□□□□ 0.35
DDB1-209ENST00000537877 MED14O60244 1454 aa17.24■□□□□ 0.35
DDB1-209ENST00000537877 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
DDB1-209ENST00000537877 QRICH2Q9H0J4 1663 aa17.24■□□□□ 0.35
DDB1-209ENST00000537877 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
DDB1-209ENST00000537877 TESK2Q96S53 571 aa17.23■□□□□ 0.35
DDB1-209ENST00000537877 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
DDB1-209ENST00000537877 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
DDB1-209ENST00000537877 CENPJQ9HC77 1338 aaPredicted RBP17.21■□□□□ 0.35
DDB1-209ENST00000537877 CPS1P31327 1500 aa17.2■□□□□ 0.34
DDB1-209ENST00000537877 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
DDB1-209ENST00000537877 TMF1P82094 1093 aa17.2■□□□□ 0.34
DDB1-209ENST00000537877 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
DDB1-209ENST00000537877 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
DDB1-209ENST00000537877 BCANQ96GW7 911 aa17.19■□□□□ 0.34
DDB1-209ENST00000537877 TECPR2O15040 1411 aa17.19■□□□□ 0.34
DDB1-209ENST00000537877 METP08581 1390 aa17.19■□□□□ 0.34
DDB1-209ENST00000537877 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
DDB1-209ENST00000537877 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
DDB1-209ENST00000537877 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
DDB1-209ENST00000537877 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
DDB1-209ENST00000537877 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
DDB1-209ENST00000537877 PIK3R4Q99570 1358 aa17.16■□□□□ 0.34
DDB1-209ENST00000537877 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
DDB1-209ENST00000537877 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
DDB1-209ENST00000537877 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
DDB1-209ENST00000537877 STK26Q9P289 416 aa17.15■□□□□ 0.34
DDB1-209ENST00000537877 XRN1Q8IZH2 1706 aaKnown RBP17.14■□□□□ 0.33
DDB1-209ENST00000537877 LMTK3Q96Q04 1460 aa17.14■□□□□ 0.33
DDB1-209ENST00000537877 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
DDB1-209ENST00000537877 SLC26A8Q96RN1 970 aa17.12■□□□□ 0.33
DDB1-209ENST00000537877 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
DDB1-209ENST00000537877 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
DDB1-209ENST00000537877 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
DDB1-209ENST00000537877 PTPRUQ92729 1446 aa17.11■□□□□ 0.33
DDB1-209ENST00000537877 MYOM1P52179 1685 aa17.1■□□□□ 0.33
DDB1-209ENST00000537877 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
DDB1-209ENST00000537877 POGKQ9P215 609 aa17.1■□□□□ 0.33
DDB1-209ENST00000537877 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
DDB1-209ENST00000537877 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.33
DDB1-209ENST00000537877 PUS7Q96PZ0 661 aaKnown RBP17.08■□□□□ 0.32
DDB1-209ENST00000537877 EVC2Q86UK5 1308 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms