RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 RIMS2Q9UQ26 1411 aa24.8■■□□□ 1.56
ATN1-203ENST00000537488 ALKQ9UM73 1620 aa24.79■■□□□ 1.56
ATN1-203ENST00000537488 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
ATN1-203ENST00000537488 PIP4K2BP78356 416 aa24.77■■□□□ 1.56
ATN1-203ENST00000537488 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
ATN1-203ENST00000537488 BCANQ96GW7 911 aa24.76■■□□□ 1.55
ATN1-203ENST00000537488 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
ATN1-203ENST00000537488 CLTCL1P53675 1640 aa24.72■■□□□ 1.55
ATN1-203ENST00000537488 PPP1R15AO75807 674 aaPredicted RBP24.72■■□□□ 1.55
ATN1-203ENST00000537488 RBM33Q96EV2 1170 aaKnown RBP24.72■■□□□ 1.55
ATN1-203ENST00000537488 PLEKHG1Q9ULL1 1385 aa24.7■■□□□ 1.55
ATN1-203ENST00000537488 TOM1O60784 492 aa24.7■■□□□ 1.54
ATN1-203ENST00000537488 KCNA6P17658 529 aa24.68■■□□□ 1.54
ATN1-203ENST00000537488 CHD2O14647 1828 aaKnown RBP24.68■■□□□ 1.54
ATN1-203ENST00000537488 FOXD1Q16676 465 aa24.66■■□□□ 1.54
ATN1-203ENST00000537488 TRPM2O94759 1503 aa24.66■■□□□ 1.54
ATN1-203ENST00000537488 HSPA1LP34931 641 aa24.65■■□□□ 1.54
ATN1-203ENST00000537488 NWD1Q149M9 1564 aa24.65■■□□□ 1.54
ATN1-203ENST00000537488 ADAMTS13Q76LX8 1427 aa24.65■■□□□ 1.54
ATN1-203ENST00000537488 KIF1BO60333 1816 aa24.64■■□□□ 1.54
ATN1-203ENST00000537488 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.54
ATN1-203ENST00000537488 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.64■■□□□ 1.54
ATN1-203ENST00000537488 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
ATN1-203ENST00000537488 TMEM94Q12767 1356 aa24.64■■□□□ 1.53
ATN1-203ENST00000537488 PROSER2Q86WR7 435 aaPredicted RBP24.63■■□□□ 1.53
ATN1-203ENST00000537488 ZNF326Q5BKZ1 582 aaKnown RBP24.62■■□□□ 1.53
ATN1-203ENST00000537488 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
ATN1-203ENST00000537488 TBX22Q9Y458 520 aa24.59■■□□□ 1.53
ATN1-203ENST00000537488 NEXMIFQ5QGS0 1516 aa24.57■■□□□ 1.52
ATN1-203ENST00000537488 NKTRP30414 1462 aaKnown RBP24.56■■□□□ 1.52
ATN1-203ENST00000537488 DISP3Q9P2K9 1392 aa24.55■■□□□ 1.52
ATN1-203ENST00000537488 PTPRUQ92729 1446 aa24.54■■□□□ 1.52
ATN1-203ENST00000537488 DIP2AQ14689 1571 aa24.54■■□□□ 1.52
ATN1-203ENST00000537488 MPHOSPH9Q99550 1183 aa24.53■■□□□ 1.52
ATN1-203ENST00000537488 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
ATN1-203ENST00000537488 SETBP1Q9Y6X0 1596 aa24.51■■□□□ 1.51
ATN1-203ENST00000537488 AMOTL2Q9Y2J4 779 aa24.48■■□□□ 1.51
ATN1-203ENST00000537488 PPLO60437 1756 aa24.47■■□□□ 1.51
ATN1-203ENST00000537488 METP08581 1390 aa24.47■■□□□ 1.51
ATN1-203ENST00000537488 RAB3GAP2Q9H2M9 1393 aa24.46■■□□□ 1.51
ATN1-203ENST00000537488 XRN1Q8IZH2 1706 aaKnown RBP24.45■■□□□ 1.5
ATN1-203ENST00000537488 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
ATN1-203ENST00000537488 ROBO1Q9Y6N7 1651 aa24.45■■□□□ 1.5
ATN1-203ENST00000537488 MSH6P52701 1360 aa24.44■■□□□ 1.5
ATN1-203ENST00000537488 PIK3R4Q99570 1358 aa24.44■■□□□ 1.5
ATN1-203ENST00000537488 SETD1AO15047 1707 aaKnown RBP24.43■■□□□ 1.5
ATN1-203ENST00000537488 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.43■■□□□ 1.5
ATN1-203ENST00000537488 RGL3Q3MIN7 710 aa24.4■■□□□ 1.5
ATN1-203ENST00000537488 C14orf37Q86TY3 774 aa24.4■■□□□ 1.5
ATN1-203ENST00000537488 CCDC144AA2RUR9 1427 aa24.4■■□□□ 1.5
ATN1-203ENST00000537488 FAM135BQ49AJ0 1406 aa24.4■■□□□ 1.5
ATN1-203ENST00000537488 MED1Q15648 1581 aaPredicted RBP24.4■■□□□ 1.5
ATN1-203ENST00000537488 SPATA31E1Q6ZUB1 1445 aa24.37■■□□□ 1.49
ATN1-203ENST00000537488 SLAIN2Q9P270 581 aa24.37■■□□□ 1.49
ATN1-203ENST00000537488 IFT172Q9UG01 1749 aa24.37■■□□□ 1.49
ATN1-203ENST00000537488 VGFO15240 615 aaPredicted RBP24.36■■□□□ 1.49
ATN1-203ENST00000537488 RPGRIP1LQ68CZ1 1315 aa24.35■■□□□ 1.49
ATN1-203ENST00000537488 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
ATN1-203ENST00000537488 ADGRF5Q8IZF2 1346 aa24.35■■□□□ 1.49
ATN1-203ENST00000537488 C19orf44Q9H6X5 657 aa24.32■■□□□ 1.48
ATN1-203ENST00000537488 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
ATN1-203ENST00000537488 NALCNQ8IZF0 1738 aa24.3■■□□□ 1.48
ATN1-203ENST00000537488 ATF3P18847 181 aa24.28■■□□□ 1.48
ATN1-203ENST00000537488 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
ATN1-203ENST00000537488 CADPS2Q86UW7 1296 aa24.26■■□□□ 1.47
ATN1-203ENST00000537488 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
ATN1-203ENST00000537488 ASXL1Q8IXJ9 1541 aa24.23■■□□□ 1.47
ATN1-203ENST00000537488 COL16A1Q07092 1604 aaPredicted RBP24.22■■□□□ 1.47
ATN1-203ENST00000537488 ADGRL3Q9HAR2 1447 aa24.22■■□□□ 1.47
ATN1-203ENST00000537488 ANKRD30BQ9BXX2 1392 aa24.22■■□□□ 1.47
ATN1-203ENST00000537488 MST1RQ04912 1400 aa24.21■■□□□ 1.47
ATN1-203ENST00000537488 TMEM132EQ6IEE7 984 aa24.21■■□□□ 1.47
ATN1-203ENST00000537488 PTCH1Q13635 1447 aa24.2■■□□□ 1.46
ATN1-203ENST00000537488 BRINP3Q76B58 766 aa24.2■■□□□ 1.46
ATN1-203ENST00000537488 DCCP43146 1447 aa24.19■■□□□ 1.46
ATN1-203ENST00000537488 STK26Q9P289 416 aa24.19■■□□□ 1.46
ATN1-203ENST00000537488 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
ATN1-203ENST00000537488 AHDC1Q5TGY3 1603 aaPredicted RBP24.17■■□□□ 1.46
ATN1-203ENST00000537488 HRCP23327 699 aa24.16■■□□□ 1.46
ATN1-203ENST00000537488 DDX17Q92841 729 aaKnown RBP24.16■■□□□ 1.46
ATN1-203ENST00000537488 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
ATN1-203ENST00000537488 PRAG1Q86YV5 1406 aa24.15■■□□□ 1.46
ATN1-203ENST00000537488 WAPLQ7Z5K2 1190 aa24.14■■□□□ 1.45
ATN1-203ENST00000537488 RGS17Q9UGC6 210 aaPredicted RBP24.14■■□□□ 1.45
ATN1-203ENST00000537488 CFAP70Q5T0N1 1121 aa24.13■■□□□ 1.45
ATN1-203ENST00000537488 PLEKHH1Q9ULM0 1364 aa24.13■■□□□ 1.45
ATN1-203ENST00000537488 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
ATN1-203ENST00000537488 NHSL1Q5SYE7 1610 aa24.12■■□□□ 1.45
ATN1-203ENST00000537488 KNDC1Q76NI1 1749 aa24.11■■□□□ 1.45
ATN1-203ENST00000537488 LRPPRCP42704 1394 aaKnown RBP24.11■■□□□ 1.45
ATN1-203ENST00000537488 MYOM2P54296 1465 aa24.11■■□□□ 1.45
ATN1-203ENST00000537488 C14orf93Q9H972 538 aaKnown RBP24.1■■□□□ 1.45
ATN1-203ENST00000537488 KDM2AQ9Y2K7 1162 aa24.1■■□□□ 1.45
ATN1-203ENST00000537488 JCADQ9P266 1359 aa24.1■■□□□ 1.45
ATN1-203ENST00000537488 C1orf167Q5SNV9 1468 aa24.1■■□□□ 1.45
ATN1-203ENST00000537488 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
ATN1-203ENST00000537488 SOCS7O14512 581 aa24.08■■□□□ 1.45
ATN1-203ENST00000537488 ORAI2Q96SN7 254 aa24.08■■□□□ 1.45
ATN1-203ENST00000537488 TECPR2O15040 1411 aa24.08■■□□□ 1.44
ATN1-203ENST00000537488 LRP6O75581 1613 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms