RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 MSH6P52701 1360 aa13.73□□□□□ -0.21
SMAD3-203ENST00000537194 CHGAP10645 457 aaKnown RBP13.73□□□□□ -0.21
SMAD3-203ENST00000537194 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMAD3-203ENST00000537194 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
SMAD3-203ENST00000537194 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
SMAD3-203ENST00000537194 TET3O43151 1660 aa13.7□□□□□ -0.22
SMAD3-203ENST00000537194 PLEKHG1Q9ULL1 1385 aa13.69□□□□□ -0.22
SMAD3-203ENST00000537194 GCC2Q8IWJ2 1684 aa13.69□□□□□ -0.22
SMAD3-203ENST00000537194 RIMS2Q9UQ26 1411 aa13.68□□□□□ -0.22
SMAD3-203ENST00000537194 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
SMAD3-203ENST00000537194 MYO5BQ9ULV0 1848 aa13.68□□□□□ -0.22
SMAD3-203ENST00000537194 ROBO1Q9Y6N7 1651 aa13.68□□□□□ -0.22
SMAD3-203ENST00000537194 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
SMAD3-203ENST00000537194 TBX22Q9Y458 520 aa13.67□□□□□ -0.22
SMAD3-203ENST00000537194 NWD1Q149M9 1564 aa13.66□□□□□ -0.22
SMAD3-203ENST00000537194 CHD2O14647 1828 aaKnown RBP13.66□□□□□ -0.22
SMAD3-203ENST00000537194 ROCK1Q13464 1354 aa13.64□□□□□ -0.23
SMAD3-203ENST00000537194 ATF3P18847 181 aa13.64□□□□□ -0.23
SMAD3-203ENST00000537194 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
SMAD3-203ENST00000537194 ZFYVE9O95405 1425 aa13.64□□□□□ -0.23
SMAD3-203ENST00000537194 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
SMAD3-203ENST00000537194 UNC13BO14795 1591 aa13.63□□□□□ -0.23
SMAD3-203ENST00000537194 JCADQ9P266 1359 aa13.63□□□□□ -0.23
SMAD3-203ENST00000537194 ITGAEP38570 1179 aa13.63□□□□□ -0.23
SMAD3-203ENST00000537194 CADPS2Q86UW7 1296 aa13.63□□□□□ -0.23
SMAD3-203ENST00000537194 TMEM131LA2VDJ0 1609 aa13.63□□□□□ -0.23
SMAD3-203ENST00000537194 NUP155O75694 1391 aa13.62□□□□□ -0.23
SMAD3-203ENST00000537194 PIK3R4Q99570 1358 aa13.61□□□□□ -0.23
SMAD3-203ENST00000537194 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
SMAD3-203ENST00000537194 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-203ENST00000537194 C19orf44Q9H6X5 657 aa13.61□□□□□ -0.23
SMAD3-203ENST00000537194 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-203ENST00000537194 DIP2AQ14689 1571 aa13.61□□□□□ -0.23
SMAD3-203ENST00000537194 E9PCH4 1651 aa13.6□□□□□ -0.23
SMAD3-203ENST00000537194 IQGAP3Q86VI3 1631 aa13.6□□□□□ -0.23
SMAD3-203ENST00000537194 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
SMAD3-203ENST00000537194 POTEAQ6S8J7 498 aa13.58□□□□□ -0.24
SMAD3-203ENST00000537194 TRPM2O94759 1503 aa13.58□□□□□ -0.24
SMAD3-203ENST00000537194 AMOTL2Q9Y2J4 779 aa13.57□□□□□ -0.24
SMAD3-203ENST00000537194 SPATA31A6Q5VVP1 1343 aa13.57□□□□□ -0.24
SMAD3-203ENST00000537194 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-203ENST00000537194 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-203ENST00000537194 ADAMTS13Q76LX8 1427 aa13.55□□□□□ -0.24
SMAD3-203ENST00000537194 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
SMAD3-203ENST00000537194 COL16A1Q07092 1604 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-203ENST00000537194 DCCP43146 1447 aa13.51□□□□□ -0.25
SMAD3-203ENST00000537194 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
SMAD3-203ENST00000537194 AHDC1Q5TGY3 1603 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-203ENST00000537194 KIF1BO60333 1816 aa13.49□□□□□ -0.25
SMAD3-203ENST00000537194 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-203ENST00000537194 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-203ENST00000537194 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
SMAD3-203ENST00000537194 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-203ENST00000537194 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
SMAD3-203ENST00000537194 LRRC59Q96AG4 307 aaKnown RBP13.48□□□□□ -0.25
SMAD3-203ENST00000537194 SETBP1Q9Y6X0 1596 aa13.48□□□□□ -0.25
SMAD3-203ENST00000537194 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-203ENST00000537194 RXRBP28702 533 aa13.47□□□□□ -0.25
SMAD3-203ENST00000537194 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
SMAD3-203ENST00000537194 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
SMAD3-203ENST00000537194 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
SMAD3-203ENST00000537194 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
SMAD3-203ENST00000537194 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
SMAD3-203ENST00000537194 LRP6O75581 1613 aa13.43□□□□□ -0.26
SMAD3-203ENST00000537194 ADGRL3Q9HAR2 1447 aa13.43□□□□□ -0.26
SMAD3-203ENST00000537194 METP08581 1390 aa13.43□□□□□ -0.26
SMAD3-203ENST00000537194 NRXN3Q9Y4C0 1643 aa13.42□□□□□ -0.26
SMAD3-203ENST00000537194 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
SMAD3-203ENST00000537194 MST1RQ04912 1400 aa13.42□□□□□ -0.26
SMAD3-203ENST00000537194 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
SMAD3-203ENST00000537194 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
SMAD3-203ENST00000537194 AFF2P51816 1311 aa13.41□□□□□ -0.26
SMAD3-203ENST00000537194 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
SMAD3-203ENST00000537194 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
SMAD3-203ENST00000537194 NHSL1Q5SYE7 1610 aa13.4□□□□□ -0.26
SMAD3-203ENST00000537194 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
SMAD3-203ENST00000537194 NAIPQ13075 1403 aa13.39□□□□□ -0.27
SMAD3-203ENST00000537194 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
SMAD3-203ENST00000537194 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
SMAD3-203ENST00000537194 CDK12Q9NYV4 1490 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-203ENST00000537194 UPF1Q92900 1129 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMAD3-203ENST00000537194 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
SMAD3-203ENST00000537194 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
SMAD3-203ENST00000537194 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
SMAD3-203ENST00000537194 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
SMAD3-203ENST00000537194 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
SMAD3-203ENST00000537194 HFM1A2PYH4 1435 aa13.36□□□□□ -0.27
SMAD3-203ENST00000537194 C1orf167Q5SNV9 1468 aa13.36□□□□□ -0.27
SMAD3-203ENST00000537194 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
SMAD3-203ENST00000537194 FOXD1Q16676 465 aa13.35□□□□□ -0.27
SMAD3-203ENST00000537194 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
SMAD3-203ENST00000537194 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
SMAD3-203ENST00000537194 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
SMAD3-203ENST00000537194 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
SMAD3-203ENST00000537194 ORAI2Q96SN7 254 aa13.32□□□□□ -0.28
SMAD3-203ENST00000537194 USP21Q9UK80 565 aa13.32□□□□□ -0.28
SMAD3-203ENST00000537194 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
SMAD3-203ENST00000537194 PPLO60437 1756 aa13.32□□□□□ -0.28
SMAD3-203ENST00000537194 LRPPRCP42704 1394 aaKnown RBP13.32□□□□□ -0.28
SMAD3-203ENST00000537194 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms