RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 CEP170BQ9Y4F5 1589 aaPredicted RBP25.67■■□□□ 1.7
CACNB3-202ENST00000536187 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
CACNB3-202ENST00000536187 KDM5AP29375 1690 aaKnown RBP25.65■■□□□ 1.7
CACNB3-202ENST00000536187 MYOM2P54296 1465 aa25.64■■□□□ 1.7
CACNB3-202ENST00000536187 ZNF142P52746 1687 aaPredicted RBP25.63■■□□□ 1.69
CACNB3-202ENST00000536187 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
CACNB3-202ENST00000536187 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
CACNB3-202ENST00000536187 NRXN1Q9ULB1 1477 aa25.62■■□□□ 1.69
CACNB3-202ENST00000536187 TRPM1Q7Z4N2 1603 aa25.62■■□□□ 1.69
CACNB3-202ENST00000536187 RIMS2Q9UQ26 1411 aa25.61■■□□□ 1.69
CACNB3-202ENST00000536187 RPGRIP1LQ68CZ1 1315 aa25.58■■□□□ 1.69
CACNB3-202ENST00000536187 TMEM2Q9UHN6 1383 aa25.58■■□□□ 1.69
CACNB3-202ENST00000536187 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
CACNB3-202ENST00000536187 RALGAPBQ86X10 1494 aa25.57■■□□□ 1.68
CACNB3-202ENST00000536187 PIK3C2GO75747 1445 aa25.57■■□□□ 1.68
CACNB3-202ENST00000536187 LTKP29376 864 aa25.54■■□□□ 1.68
CACNB3-202ENST00000536187 ARHGAP23Q9P227 1491 aa25.54■■□□□ 1.68
CACNB3-202ENST00000536187 SLIT1O75093 1534 aa25.54■■□□□ 1.68
CACNB3-202ENST00000536187 CFAP70Q5T0N1 1121 aa25.53■■□□□ 1.68
CACNB3-202ENST00000536187 NRXN3Q9Y4C0 1643 aa25.51■■□□□ 1.67
CACNB3-202ENST00000536187 VGFO15240 615 aaPredicted RBP25.5■■□□□ 1.67
CACNB3-202ENST00000536187 THEMISQ8N1K5 641 aaPredicted RBP25.49■■□□□ 1.67
CACNB3-202ENST00000536187 HIRIP3Q9BW71 556 aaPredicted RBP25.49■■□□□ 1.67
CACNB3-202ENST00000536187 IQGAP1P46940 1657 aa25.48■■□□□ 1.67
CACNB3-202ENST00000536187 ROCK2O75116 1388 aaKnown RBP25.48■■□□□ 1.67
CACNB3-202ENST00000536187 STAC3Q96MF2 364 aa25.48■■□□□ 1.67
CACNB3-202ENST00000536187 KIAA1210Q9ULL0 1709 aa25.47■■□□□ 1.67
CACNB3-202ENST00000536187 ASXL1Q8IXJ9 1541 aa25.46■■□□□ 1.67
CACNB3-202ENST00000536187 TXNDC2Q86VQ3 553 aa25.45■■□□□ 1.67
CACNB3-202ENST00000536187 SETD1AO15047 1707 aaKnown RBP25.45■■□□□ 1.67
CACNB3-202ENST00000536187 LMTK3Q96Q04 1460 aa25.45■■□□□ 1.66
CACNB3-202ENST00000536187 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
CACNB3-202ENST00000536187 C14orf93Q9H972 538 aaKnown RBP25.44■■□□□ 1.66
CACNB3-202ENST00000536187 ADGRB1O14514 1584 aa25.44■■□□□ 1.66
CACNB3-202ENST00000536187 ALKQ9UM73 1620 aa25.43■■□□□ 1.66
CACNB3-202ENST00000536187 TMEM132EQ6IEE7 984 aa25.43■■□□□ 1.66
CACNB3-202ENST00000536187 CARD11Q9BXL7 1154 aa25.43■■□□□ 1.66
CACNB3-202ENST00000536187 SCAF11Q99590 1463 aaKnown RBP25.42■■□□□ 1.66
CACNB3-202ENST00000536187 HSPA2P54652 639 aa25.42■■□□□ 1.66
CACNB3-202ENST00000536187 SETBP1Q9Y6X0 1596 aa25.42■■□□□ 1.66
CACNB3-202ENST00000536187 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.41■■□□□ 1.66
CACNB3-202ENST00000536187 LAMC1P11047 1609 aa25.39■■□□□ 1.66
CACNB3-202ENST00000536187 ADAMTS13Q76LX8 1427 aa25.39■■□□□ 1.65
CACNB3-202ENST00000536187 PLEKHG1Q9ULL1 1385 aa25.39■■□□□ 1.65
CACNB3-202ENST00000536187 HSPA5P11021 654 aaKnown RBP25.38■■□□□ 1.65
CACNB3-202ENST00000536187 USP47Q96K76 1375 aa25.38■■□□□ 1.65
CACNB3-202ENST00000536187 EID1Q9Y6B2 187 aa25.37■■□□□ 1.65
CACNB3-202ENST00000536187 POLR1AO95602 1720 aaPredicted RBP25.36■■□□□ 1.65
CACNB3-202ENST00000536187 NCKAP5LQ9HCH0 1330 aa25.35■■□□□ 1.65
CACNB3-202ENST00000536187 METP08581 1390 aa25.35■■□□□ 1.65
CACNB3-202ENST00000536187 HDGFP51858 240 aaKnown RBP25.34■■□□□ 1.65
CACNB3-202ENST00000536187 SLC26A8Q96RN1 970 aa25.34■■□□□ 1.65
CACNB3-202ENST00000536187 BCANQ96GW7 911 aa25.33■■□□□ 1.65
CACNB3-202ENST00000536187 MED14O60244 1454 aa25.33■■□□□ 1.65
CACNB3-202ENST00000536187 ANKLE2Q86XL3 938 aa25.32■■□□□ 1.64
CACNB3-202ENST00000536187 EIF4G2P78344 907 aaKnown RBP eCLIP25.32■■□□□ 1.64
CACNB3-202ENST00000536187 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
CACNB3-202ENST00000536187 TRAK1Q9UPV9 953 aa25.28■■□□□ 1.64
CACNB3-202ENST00000536187 STK26Q9P289 416 aa25.28■■□□□ 1.64
CACNB3-202ENST00000536187 ZNF316A6NFI3 1004 aaPredicted RBP25.27■■□□□ 1.64
CACNB3-202ENST00000536187 YTHDC2Q9H6S0 1430 aaKnown RBP25.27■■□□□ 1.64
CACNB3-202ENST00000536187 STRCQ7RTU9 1775 aa25.27■■□□□ 1.64
CACNB3-202ENST00000536187 ARHGEF28Q8N1W1 1705 aaKnown RBP25.27■■□□□ 1.64
CACNB3-202ENST00000536187 NPHP4O75161 1426 aaPredicted RBP25.26■■□□□ 1.63
CACNB3-202ENST00000536187 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
CACNB3-202ENST00000536187 C11orf95C9JLR9 678 aaPredicted RBP25.24■■□□□ 1.63
CACNB3-202ENST00000536187 DIP2AQ14689 1571 aa25.21■■□□□ 1.63
CACNB3-202ENST00000536187 TESK2Q96S53 571 aa25.2■■□□□ 1.62
CACNB3-202ENST00000536187 TBX22Q9Y458 520 aa25.19■■□□□ 1.62
CACNB3-202ENST00000536187 LRPPRCP42704 1394 aaKnown RBP25.19■■□□□ 1.62
CACNB3-202ENST00000536187 PLEKHH1Q9ULM0 1364 aa25.17■■□□□ 1.62
CACNB3-202ENST00000536187 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
CACNB3-202ENST00000536187 KNDC1Q76NI1 1749 aa25.16■■□□□ 1.62
CACNB3-202ENST00000536187 SAFB2Q14151 953 aaKnown RBP eCLIP25.16■■□□□ 1.62
CACNB3-202ENST00000536187 XRN1Q8IZH2 1706 aaKnown RBP25.15■■□□□ 1.62
CACNB3-202ENST00000536187 ABCC11Q96J66 1382 aa25.14■■□□□ 1.62
CACNB3-202ENST00000536187 ROBO2Q9HCK4 1378 aa25.14■■□□□ 1.62
CACNB3-202ENST00000536187 WAPLQ7Z5K2 1190 aa25.14■■□□□ 1.61
CACNB3-202ENST00000536187 CPS1P31327 1500 aa25.13■■□□□ 1.61
CACNB3-202ENST00000536187 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
CACNB3-202ENST00000536187 DISP3Q9P2K9 1392 aa25.13■■□□□ 1.61
CACNB3-202ENST00000536187 WASHC2AQ641Q2 1341 aa25.13■■□□□ 1.61
CACNB3-202ENST00000536187 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
CACNB3-202ENST00000536187 CHD2O14647 1828 aaKnown RBP25.13■■□□□ 1.61
CACNB3-202ENST00000536187 TECPR2O15040 1411 aa25.13■■□□□ 1.61
CACNB3-202ENST00000536187 DLC1Q96QB1 1528 aa25.12■■□□□ 1.61
CACNB3-202ENST00000536187 CENPJQ9HC77 1338 aaPredicted RBP25.12■■□□□ 1.61
CACNB3-202ENST00000536187 AMOTL2Q9Y2J4 779 aa25.12■■□□□ 1.61
CACNB3-202ENST00000536187 KIF7Q2M1P5 1343 aa25.09■■□□□ 1.61
CACNB3-202ENST00000536187 KCNA6P17658 529 aa25.09■■□□□ 1.61
CACNB3-202ENST00000536187 STRCP1A6NGW2 1772 aa25.08■■□□□ 1.61
CACNB3-202ENST00000536187 CCDC7Q96M83 1385 aa25.06■■□□□ 1.6
CACNB3-202ENST00000536187 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
CACNB3-202ENST00000536187 TULP4Q9NRJ4 1543 aa25.05■■□□□ 1.6
CACNB3-202ENST00000536187 MINK1Q8N4C8 1332 aaPredicted RBP25.05■■□□□ 1.6
CACNB3-202ENST00000536187 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.05■■□□□ 1.6
CACNB3-202ENST00000536187 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
CACNB3-202ENST00000536187 POGKQ9P215 609 aa25.04■■□□□ 1.6
CACNB3-202ENST00000536187 NWD1Q149M9 1564 aa25.04■■□□□ 1.6
CACNB3-202ENST00000536187 PTCH1Q13635 1447 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms