RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 A2ML1A8K2U0 1454 aa32.45■■■□□ 2.79
RBFOX1-206ENST00000535565 PLPPR3Q6T4P5 718 aa32.45■■■□□ 2.79
RBFOX1-206ENST00000535565 UBR1Q8IWV7 1749 aa32.44■■■□□ 2.78
RBFOX1-206ENST00000535565 NRXN1Q9ULB1 1477 aa32.44■■■□□ 2.78
RBFOX1-206ENST00000535565 ROCK2O75116 1388 aaKnown RBP32.44■■■□□ 2.78
RBFOX1-206ENST00000535565 LAMC1P11047 1609 aa32.42■■■□□ 2.78
RBFOX1-206ENST00000535565 MYO3AQ8NEV4 1616 aa32.42■■■□□ 2.78
RBFOX1-206ENST00000535565 VGFO15240 615 aaPredicted RBP32.41■■■□□ 2.78
RBFOX1-206ENST00000535565 EIF4G2P78344 907 aaKnown RBP eCLIP32.41■■■□□ 2.78
RBFOX1-206ENST00000535565 ADGRF5Q8IZF2 1346 aa32.4■■■□□ 2.78
RBFOX1-206ENST00000535565 ZFYVE9O95405 1425 aa32.38■■■□□ 2.77
RBFOX1-206ENST00000535565 CARD11Q9BXL7 1154 aa32.38■■■□□ 2.77
RBFOX1-206ENST00000535565 GPRASP1Q5JY77 1395 aa32.36■■■□□ 2.77
RBFOX1-206ENST00000535565 PIK3C2GO75747 1445 aa32.36■■■□□ 2.77
RBFOX1-206ENST00000535565 PTPRMP28827 1452 aa32.34■■■□□ 2.77
RBFOX1-206ENST00000535565 RIMS2Q9UQ26 1411 aa32.33■■■□□ 2.77
RBFOX1-206ENST00000535565 HSPA5P11021 654 aaKnown RBP32.32■■■□□ 2.77
RBFOX1-206ENST00000535565 SETD1BQ9UPS6 1966 aaKnown RBP32.32■■■□□ 2.76
RBFOX1-206ENST00000535565 USP47Q96K76 1375 aa32.32■■■□□ 2.76
RBFOX1-206ENST00000535565 NBPF1Q3BBV0 1214 aa32.31■■■□□ 2.76
RBFOX1-206ENST00000535565 NUTM2DQ5VT03 806 aaPredicted RBP32.3■■■□□ 2.76
RBFOX1-206ENST00000535565 CEP170BQ9Y4F5 1589 aaPredicted RBP32.29■■■□□ 2.76
RBFOX1-206ENST00000535565 ZNF142P52746 1687 aaPredicted RBP32.28■■■□□ 2.76
RBFOX1-206ENST00000535565 HDGFP51858 240 aaKnown RBP32.28■■■□□ 2.76
RBFOX1-206ENST00000535565 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.28■■■□□ 2.76
RBFOX1-206ENST00000535565 HIRIP3Q9BW71 556 aaPredicted RBP32.28■■■□□ 2.76
RBFOX1-206ENST00000535565 SETBP1Q9Y6X0 1596 aa32.27■■■□□ 2.76
RBFOX1-206ENST00000535565 TMEM2Q9UHN6 1383 aa32.26■■■□□ 2.75
RBFOX1-206ENST00000535565 IQGAP1P46940 1657 aa32.25■■■□□ 2.75
RBFOX1-206ENST00000535565 CFAP70Q5T0N1 1121 aa32.25■■■□□ 2.75
RBFOX1-206ENST00000535565 C14orf93Q9H972 538 aaKnown RBP32.23■■■□□ 2.75
RBFOX1-206ENST00000535565 SLIT1O75093 1534 aa32.2■■■□□ 2.75
RBFOX1-206ENST00000535565 THEMISQ8N1K5 641 aaPredicted RBP32.2■■■□□ 2.75
RBFOX1-206ENST00000535565 SCAF11Q99590 1463 aaKnown RBP32.19■■■□□ 2.74
RBFOX1-206ENST00000535565 ARHGAP23Q9P227 1491 aa32.17■■■□□ 2.74
RBFOX1-206ENST00000535565 POLR1AO95602 1720 aaPredicted RBP32.17■■■□□ 2.74
RBFOX1-206ENST00000535565 ADGRB1O14514 1584 aa32.15■■■□□ 2.74
RBFOX1-206ENST00000535565 ALKQ9UM73 1620 aa32.14■■■□□ 2.74
RBFOX1-206ENST00000535565 EIF3AQ14152 1382 aaKnown RBP32.14■■■□□ 2.73
RBFOX1-206ENST00000535565 EID1Q9Y6B2 187 aa32.13■■■□□ 2.73
RBFOX1-206ENST00000535565 ST20-MTHFSA0A0A6YYL1 179 aa32.11■■■□□ 2.73
RBFOX1-206ENST00000535565 NRXN3Q9Y4C0 1643 aa32.1■■■□□ 2.73
RBFOX1-206ENST00000535565 SETD1AO15047 1707 aaKnown RBP32.09■■■□□ 2.73
RBFOX1-206ENST00000535565 TXNDC2Q86VQ3 553 aa32.08■■■□□ 2.73
RBFOX1-206ENST00000535565 PLEKHG1Q9ULL1 1385 aa32.07■■■□□ 2.72
RBFOX1-206ENST00000535565 KDM4FA0A1W2PPD8 638 aa32.07■■■□□ 2.72
RBFOX1-206ENST00000535565 SENP3Q9H4L4 574 aaPredicted RBP32.06■■■□□ 2.72
RBFOX1-206ENST00000535565 ASXL1Q8IXJ9 1541 aa32.05■■■□□ 2.72
RBFOX1-206ENST00000535565 DIEXFQ68CQ4 756 aaKnown RBP32.05■■■□□ 2.72
RBFOX1-206ENST00000535565 TMEM132EQ6IEE7 984 aa32.05■■■□□ 2.72
RBFOX1-206ENST00000535565 LTKP29376 864 aa32.04■■■□□ 2.72
RBFOX1-206ENST00000535565 BCANQ96GW7 911 aa32.02■■■□□ 2.72
RBFOX1-206ENST00000535565 ARHGEF28Q8N1W1 1705 aaKnown RBP32.01■■■□□ 2.71
RBFOX1-206ENST00000535565 CCDC7Q96M83 1385 aa31.99■■■□□ 2.71
RBFOX1-206ENST00000535565 WASHC2AQ641Q2 1341 aa31.98■■■□□ 2.71
RBFOX1-206ENST00000535565 YTHDC2Q9H6S0 1430 aaKnown RBP31.97■■■□□ 2.71
RBFOX1-206ENST00000535565 TRAK1Q9UPV9 953 aa31.97■■■□□ 2.71
RBFOX1-206ENST00000535565 DIP2AQ14689 1571 aa31.95■■■□□ 2.71
RBFOX1-206ENST00000535565 C11orf95C9JLR9 678 aaPredicted RBP31.95■■■□□ 2.71
RBFOX1-206ENST00000535565 QRICH2Q9H0J4 1663 aa31.94■■■□□ 2.7
RBFOX1-206ENST00000535565 ANKLE2Q86XL3 938 aa31.94■■■□□ 2.7
RBFOX1-206ENST00000535565 TESK2Q96S53 571 aa31.94■■■□□ 2.7
RBFOX1-206ENST00000535565 ADAMTS13Q76LX8 1427 aa31.94■■■□□ 2.7
RBFOX1-206ENST00000535565 KIF7Q2M1P5 1343 aa31.94■■■□□ 2.7
RBFOX1-206ENST00000535565 SLC24A1O60721 1099 aa31.93■■■□□ 2.7
RBFOX1-206ENST00000535565 CENPJQ9HC77 1338 aaPredicted RBP31.91■■■□□ 2.7
RBFOX1-206ENST00000535565 TMF1P82094 1093 aa31.91■■■□□ 2.7
RBFOX1-206ENST00000535565 DDX10Q13206 875 aaKnown RBP31.91■■■□□ 2.7
RBFOX1-206ENST00000535565 KNDC1Q76NI1 1749 aa31.9■■■□□ 2.7
RBFOX1-206ENST00000535565 STK26Q9P289 416 aa31.9■■■□□ 2.7
RBFOX1-206ENST00000535565 LRPPRCP42704 1394 aaKnown RBP31.9■■■□□ 2.7
RBFOX1-206ENST00000535565 MED14O60244 1454 aa31.9■■■□□ 2.7
RBFOX1-206ENST00000535565 METP08581 1390 aa31.89■■■□□ 2.7
RBFOX1-206ENST00000535565 SBNO2Q9Y2G9 1366 aa31.88■■■□□ 2.69
RBFOX1-206ENST00000535565 DLC1Q96QB1 1528 aa31.88■■■□□ 2.69
RBFOX1-206ENST00000535565 TBX22Q9Y458 520 aa31.85■■■□□ 2.69
RBFOX1-206ENST00000535565 ABCC11Q96J66 1382 aa31.84■■■□□ 2.69
RBFOX1-206ENST00000535565 DISP3Q9P2K9 1392 aa31.84■■■□□ 2.69
RBFOX1-206ENST00000535565 POLR3GLQ9BT43 218 aa31.84■■■□□ 2.69
RBFOX1-206ENST00000535565 SLC26A8Q96RN1 970 aa31.82■■■□□ 2.68
RBFOX1-206ENST00000535565 CDCA8Q53HL2 280 aa31.81■■■□□ 2.68
RBFOX1-206ENST00000535565 CPS1P31327 1500 aa31.8■■■□□ 2.68
RBFOX1-206ENST00000535565 TECPR2O15040 1411 aa31.79■■■□□ 2.68
RBFOX1-206ENST00000535565 NPHP4O75161 1426 aaPredicted RBP31.78■■■□□ 2.68
RBFOX1-206ENST00000535565 POGKQ9P215 609 aa31.78■■■□□ 2.68
RBFOX1-206ENST00000535565 PRAM1Q96QH2 718 aa31.77■■■□□ 2.68
RBFOX1-206ENST00000535565 LMTK3Q96Q04 1460 aa31.76■■■□□ 2.67
RBFOX1-206ENST00000535565 PIK3R4Q99570 1358 aa31.75■■■□□ 2.67
RBFOX1-206ENST00000535565 FAM135BQ49AJ0 1406 aa31.74■■■□□ 2.67
RBFOX1-206ENST00000535565 SIRT1Q96EB6 747 aa31.73■■■□□ 2.67
RBFOX1-206ENST00000535565 NCKAP5LQ9HCH0 1330 aa31.71■■■□□ 2.67
RBFOX1-206ENST00000535565 SAFB2Q14151 953 aaKnown RBP eCLIP31.71■■■□□ 2.67
RBFOX1-206ENST00000535565 XRN1Q8IZH2 1706 aaKnown RBP31.71■■■□□ 2.67
RBFOX1-206ENST00000535565 PTPRUQ92729 1446 aa31.7■■■□□ 2.67
RBFOX1-206ENST00000535565 CHD2O14647 1828 aaKnown RBP31.69■■■□□ 2.66
RBFOX1-206ENST00000535565 EVC2Q86UK5 1308 aa31.69■■■□□ 2.66
RBFOX1-206ENST00000535565 TULP4Q9NRJ4 1543 aa31.67■■■□□ 2.66
RBFOX1-206ENST00000535565 AMOTL2Q9Y2J4 779 aa31.66■■■□□ 2.66
RBFOX1-206ENST00000535565 PTCH1Q13635 1447 aa31.66■■■□□ 2.66
RBFOX1-206ENST00000535565 WAPLQ7Z5K2 1190 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms