RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.46
PRKDC-205ENST00000535375 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
PRKDC-205ENST00000535375 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
PRKDC-205ENST00000535375 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
PRKDC-205ENST00000535375 PPP4CP60510 307 aa12.12□□□□□ -0.47
PRKDC-205ENST00000535375 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
PRKDC-205ENST00000535375 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
PRKDC-205ENST00000535375 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
PRKDC-205ENST00000535375 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
PRKDC-205ENST00000535375 PHOX2BQ99453 314 aa12.08□□□□□ -0.48
PRKDC-205ENST00000535375 NLRP7Q8WX94 980 aa12.07□□□□□ -0.48
PRKDC-205ENST00000535375 AK7Q96M32 723 aa12.07□□□□□ -0.48
PRKDC-205ENST00000535375 WBP1LQ9NX94 342 aa12.07□□□□□ -0.48
PRKDC-205ENST00000535375 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
PRKDC-205ENST00000535375 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
PRKDC-205ENST00000535375 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
PRKDC-205ENST00000535375 MDM2Q00987 491 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-205ENST00000535375 CLCN1P35523 988 aa12.02□□□□□ -0.49
PRKDC-205ENST00000535375 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
PRKDC-205ENST00000535375 DDX11L8A8MPP1 907 aa12.01□□□□□ -0.49
PRKDC-205ENST00000535375 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
PRKDC-205ENST00000535375 RDH13Q8NBN7 331 aa12.01□□□□□ -0.49
PRKDC-205ENST00000535375 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
PRKDC-205ENST00000535375 PRR14Q9BWN1 585 aa12□□□□□ -0.49
PRKDC-205ENST00000535375 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
PRKDC-205ENST00000535375 TRIM66O15016 1216 aa11.98□□□□□ -0.49
PRKDC-205ENST00000535375 KMT5BQ4FZB7 885 aa11.97□□□□□ -0.49
PRKDC-205ENST00000535375 SLC10A3P09131 477 aa11.96□□□□□ -0.49
PRKDC-205ENST00000535375 AMHR2Q16671 573 aa11.96□□□□□ -0.49
PRKDC-205ENST00000535375 CFHP08603 1231 aa11.95□□□□□ -0.5
PRKDC-205ENST00000535375 APLP1P51693 650 aa11.95□□□□□ -0.5
PRKDC-205ENST00000535375 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
PRKDC-205ENST00000535375 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-205ENST00000535375 PDE4DQ08499 809 aa11.91□□□□□ -0.5
PRKDC-205ENST00000535375 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
PRKDC-205ENST00000535375 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-205ENST00000535375 ACTN4O43707 911 aaKnown RBP11.89□□□□□ -0.51
PRKDC-205ENST00000535375 SSTR3P32745 418 aaPredicted RBP11.89□□□□□ -0.51
PRKDC-205ENST00000535375 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
PRKDC-205ENST00000535375 CD46P15529 392 aa11.88□□□□□ -0.51
PRKDC-205ENST00000535375 GCGRP47871 477 aa11.88□□□□□ -0.51
PRKDC-205ENST00000535375 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
PRKDC-205ENST00000535375 REPIN1Q9BWE0 567 aaKnown RBP11.88□□□□□ -0.51
PRKDC-205ENST00000535375 KCNC4Q03721 635 aa11.87□□□□□ -0.51
PRKDC-205ENST00000535375 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
PRKDC-205ENST00000535375 A0A0G2JS52 829 aa11.86□□□□□ -0.51
PRKDC-205ENST00000535375 MTRQ99707 1265 aa11.86□□□□□ -0.51
PRKDC-205ENST00000535375 COPS2P61201 443 aa11.85□□□□□ -0.51
PRKDC-205ENST00000535375 IL21Q9HBE4 155 aa11.85□□□□□ -0.51
PRKDC-205ENST00000535375 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
PRKDC-205ENST00000535375 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
PRKDC-205ENST00000535375 KDM4AO75164 1064 aa11.82□□□□□ -0.52
PRKDC-205ENST00000535375 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
PRKDC-205ENST00000535375 BLOC1S3Q6QNY0 202 aa11.82□□□□□ -0.52
PRKDC-205ENST00000535375 NR1I2O75469 434 aa11.81□□□□□ -0.52
PRKDC-205ENST00000535375 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-205ENST00000535375 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
PRKDC-205ENST00000535375 FUT2Q10981 343 aa11.81□□□□□ -0.52
PRKDC-205ENST00000535375 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
PRKDC-205ENST00000535375 RGS20O76081 388 aa11.79□□□□□ -0.52
PRKDC-205ENST00000535375 USP46P62068 366 aa11.79□□□□□ -0.52
PRKDC-205ENST00000535375 BEGAINQ9BUH8 593 aa11.79□□□□□ -0.52
PRKDC-205ENST00000535375 ZPR1O75312 459 aa11.77□□□□□ -0.53
PRKDC-205ENST00000535375 ZNF516Q92618 1163 aa11.77□□□□□ -0.53
PRKDC-205ENST00000535375 MS4A1P11836 297 aa11.76□□□□□ -0.53
PRKDC-205ENST00000535375 SCUBE3Q8IX30 993 aa11.76□□□□□ -0.53
PRKDC-205ENST00000535375 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
PRKDC-205ENST00000535375 MORN1Q5T089 497 aa11.75□□□□□ -0.53
PRKDC-205ENST00000535375 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
PRKDC-205ENST00000535375 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
PRKDC-205ENST00000535375 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
PRKDC-205ENST00000535375 HOXA2O43364 376 aa11.72□□□□□ -0.53
PRKDC-205ENST00000535375 SPIRE2Q8WWL2 714 aa11.72□□□□□ -0.53
PRKDC-205ENST00000535375 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
PRKDC-205ENST00000535375 Q3C1V9 767 aa11.7□□□□□ -0.54
PRKDC-205ENST00000535375 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
PRKDC-205ENST00000535375 TBC1D2Q9BYX2 928 aa11.7□□□□□ -0.54
PRKDC-205ENST00000535375 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
PRKDC-205ENST00000535375 GGCXP38435 758 aa11.68□□□□□ -0.54
PRKDC-205ENST00000535375 SPSB2Q99619 263 aa11.68□□□□□ -0.54
PRKDC-205ENST00000535375 TLL1O43897 1013 aa11.67□□□□□ -0.54
PRKDC-205ENST00000535375 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
PRKDC-205ENST00000535375 ADH1BP00325 375 aa11.66□□□□□ -0.54
PRKDC-205ENST00000535375 FDX1P10109 184 aa11.66□□□□□ -0.54
PRKDC-205ENST00000535375 HLA-CQ95604 372 aa11.66□□□□□ -0.54
PRKDC-205ENST00000535375 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
PRKDC-205ENST00000535375 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
PRKDC-205ENST00000535375 NDUFV2P19404 249 aa11.65□□□□□ -0.54
PRKDC-205ENST00000535375 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-205ENST00000535375 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
PRKDC-205ENST00000535375 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
PRKDC-205ENST00000535375 FAM117AQ9C073 453 aa11.64□□□□□ -0.55
PRKDC-205ENST00000535375 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
PRKDC-205ENST00000535375 SLC6A16Q9GZN6 736 aa11.63□□□□□ -0.55
PRKDC-205ENST00000535375 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
PRKDC-205ENST00000535375 THAP11Q96EK4 314 aa11.62□□□□□ -0.55
PRKDC-205ENST00000535375 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
PRKDC-205ENST00000535375 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
PRKDC-205ENST00000535375 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
PRKDC-205ENST00000535375 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms