RNA–Protein interactions for RNA: ENST00000535187.5

RAPGEF4-213, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-213ENST00000535187 ALKQ9UM73 1620 aa7.88□□□□□ -1.15
RAPGEF4-213ENST00000535187 DDX10Q13206 875 aaKnown RBP7.88□□□□□ -1.15
RAPGEF4-213ENST00000535187 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.88□□□□□ -1.15
RAPGEF4-213ENST00000535187 SLIT1O75093 1534 aa7.88□□□□□ -1.15
RAPGEF4-213ENST00000535187 EIF2AK4Q9P2K8 1649 aaKnown RBP7.87□□□□□ -1.15
RAPGEF4-213ENST00000535187 SCAF11Q99590 1463 aaKnown RBP7.87□□□□□ -1.15
RAPGEF4-213ENST00000535187 SYCP2Q9BX26 1530 aa7.87□□□□□ -1.15
RAPGEF4-213ENST00000535187 SLC52A1Q9NWF4 448 aa7.87□□□□□ -1.15
RAPGEF4-213ENST00000535187 TXNDC2Q86VQ3 553 aa7.87□□□□□ -1.15
RAPGEF4-213ENST00000535187 TSHZ2Q9NRE2 1034 aa7.87□□□□□ -1.15
RAPGEF4-213ENST00000535187 NGLY1Q96IV0 654 aa7.86□□□□□ -1.15
RAPGEF4-213ENST00000535187 HIRIP3Q9BW71 556 aaPredicted RBP7.86□□□□□ -1.15
RAPGEF4-213ENST00000535187 NWD1Q149M9 1564 aa7.86□□□□□ -1.15
RAPGEF4-213ENST00000535187 SLC4A1APQ9BWU0 796 aaKnown RBP7.86□□□□□ -1.15
RAPGEF4-213ENST00000535187 MSH6P52701 1360 aa7.86□□□□□ -1.15
RAPGEF4-213ENST00000535187 AHDC1Q5TGY3 1603 aaPredicted RBP7.86□□□□□ -1.15
RAPGEF4-213ENST00000535187 ARHGAP23Q9P227 1491 aa7.86□□□□□ -1.15
RAPGEF4-213ENST00000535187 PHLPP1O60346 1717 aa7.85□□□□□ -1.15
RAPGEF4-213ENST00000535187 RXRBP28702 533 aa7.85□□□□□ -1.15
RAPGEF4-213ENST00000535187 CDC42BPAQ5VT25 1732 aa7.85□□□□□ -1.15
RAPGEF4-213ENST00000535187 NUP155O75694 1391 aa7.84□□□□□ -1.15
RAPGEF4-213ENST00000535187 RGS17Q9UGC6 210 aaPredicted RBP7.84□□□□□ -1.15
RAPGEF4-213ENST00000535187 RPRD2Q5VT52 1461 aaKnown RBP7.84□□□□□ -1.15
RAPGEF4-213ENST00000535187 TIMELESSQ9UNS1 1208 aa7.83□□□□□ -1.16
RAPGEF4-213ENST00000535187 MEX3CQ5U5Q3 659 aaKnown RBP7.83□□□□□ -1.16
RAPGEF4-213ENST00000535187 MROH1Q8NDA8 1641 aa7.83□□□□□ -1.16
RAPGEF4-213ENST00000535187 ROBO1Q9Y6N7 1651 aa7.82□□□□□ -1.16
RAPGEF4-213ENST00000535187 POTEAQ6S8J7 498 aa7.82□□□□□ -1.16
RAPGEF4-213ENST00000535187 ARHGAP31Q2M1Z3 1444 aa7.82□□□□□ -1.16
RAPGEF4-213ENST00000535187 ANKRD50Q9ULJ7 1429 aa7.82□□□□□ -1.16
RAPGEF4-213ENST00000535187 DCAF8L1A6NGE4 600 aa7.82□□□□□ -1.16
RAPGEF4-213ENST00000535187 PIK3R4Q99570 1358 aa7.82□□□□□ -1.16
RAPGEF4-213ENST00000535187 KCNA6P17658 529 aa7.81□□□□□ -1.16
RAPGEF4-213ENST00000535187 DCCP43146 1447 aa7.81□□□□□ -1.16
RAPGEF4-213ENST00000535187 PRDM15P57071 1507 aaPredicted RBP7.81□□□□□ -1.16
RAPGEF4-213ENST00000535187 DIP2AQ14689 1571 aa7.81□□□□□ -1.16
RAPGEF4-213ENST00000535187 NHSL1Q5SYE7 1610 aa7.81□□□□□ -1.16
RAPGEF4-213ENST00000535187 LRRIQ1Q96JM4 1722 aa7.8□□□□□ -1.16
RAPGEF4-213ENST00000535187 RBM6P78332 1123 aaKnown RBP7.8□□□□□ -1.16
RAPGEF4-213ENST00000535187 FBXO31Q5XUX0 539 aaPredicted RBP7.8□□□□□ -1.16
RAPGEF4-213ENST00000535187 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
RAPGEF4-213ENST00000535187 FKBP8Q14318 412 aa7.79□□□□□ -1.16
RAPGEF4-213ENST00000535187 DUOX2Q9NRD8 1548 aa7.79□□□□□ -1.16
RAPGEF4-213ENST00000535187 DAPK1P53355 1430 aa7.79□□□□□ -1.16
RAPGEF4-213ENST00000535187 UBR1Q8IWV7 1749 aa7.79□□□□□ -1.16
RAPGEF4-213ENST00000535187 UNC13BO14795 1591 aa7.79□□□□□ -1.16
RAPGEF4-213ENST00000535187 ARHGEF5Q12774 1597 aa7.79□□□□□ -1.16
RAPGEF4-213ENST00000535187 COL16A1Q07092 1604 aaPredicted RBP7.79□□□□□ -1.16
RAPGEF4-213ENST00000535187 ATF3P18847 181 aa7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 MAST1Q9Y2H9 1570 aa7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 HFM1A2PYH4 1435 aa7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 ERVK-7P63135 1459 aa7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 CCER2I3L3R5 266 aa7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 VGFO15240 615 aaPredicted RBP7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 SPHKAPQ2M3C7 1700 aa7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 ERBINQ96RT1 1412 aa7.78□□□□□ -1.16
RAPGEF4-213ENST00000535187 PTPN23Q9H3S7 1636 aa7.77□□□□□ -1.16
RAPGEF4-213ENST00000535187 XIRP1Q702N8 1843 aaKnown RBP7.77□□□□□ -1.16
RAPGEF4-213ENST00000535187 CADPS2Q86UW7 1296 aa7.77□□□□□ -1.17
RAPGEF4-213ENST00000535187 NAIPQ13075 1403 aa7.77□□□□□ -1.17
RAPGEF4-213ENST00000535187 PTCH1Q13635 1447 aa7.77□□□□□ -1.17
RAPGEF4-213ENST00000535187 STRCP1A6NGW2 1772 aa7.77□□□□□ -1.17
RAPGEF4-213ENST00000535187 MSH5O43196 834 aa7.76□□□□□ -1.17
RAPGEF4-213ENST00000535187 TONSLQ96HA7 1378 aa7.76□□□□□ -1.17
RAPGEF4-213ENST00000535187 ANP32CO43423 234 aa7.76□□□□□ -1.17
RAPGEF4-213ENST00000535187 HAP1P54257 671 aaPredicted RBP7.76□□□□□ -1.17
RAPGEF4-213ENST00000535187 ABCC5O15440 1437 aa7.75□□□□□ -1.17
RAPGEF4-213ENST00000535187 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
RAPGEF4-213ENST00000535187 RGL3Q3MIN7 710 aa7.75□□□□□ -1.17
RAPGEF4-213ENST00000535187 ROCK1Q13464 1354 aa7.74□□□□□ -1.17
RAPGEF4-213ENST00000535187 IDI1Q13907 227 aa7.74□□□□□ -1.17
RAPGEF4-213ENST00000535187 TMEM94Q12767 1356 aa7.73□□□□□ -1.17
RAPGEF4-213ENST00000535187 SLC26A8Q96RN1 970 aa7.73□□□□□ -1.17
RAPGEF4-213ENST00000535187 EFCAB6Q5THR3 1501 aa7.73□□□□□ -1.17
RAPGEF4-213ENST00000535187 POGKQ9P215 609 aa7.72□□□□□ -1.17
RAPGEF4-213ENST00000535187 TMEM2Q9UHN6 1383 aa7.72□□□□□ -1.17
RAPGEF4-213ENST00000535187 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
RAPGEF4-213ENST00000535187 RBM33Q96EV2 1170 aaKnown RBP7.72□□□□□ -1.17
RAPGEF4-213ENST00000535187 ANP32EQ9BTT0 268 aa7.72□□□□□ -1.17
RAPGEF4-213ENST00000535187 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
RAPGEF4-213ENST00000535187 TRPC5Q9UL62 973 aaPredicted RBP7.71□□□□□ -1.18
RAPGEF4-213ENST00000535187 WASHC2AQ641Q2 1341 aa7.71□□□□□ -1.18
RAPGEF4-213ENST00000535187 LRRC59Q96AG4 307 aaKnown RBP7.7□□□□□ -1.18
RAPGEF4-213ENST00000535187 BLMP54132 1417 aaPredicted RBP7.7□□□□□ -1.18
RAPGEF4-213ENST00000535187 NUTM2DQ5VT03 806 aaPredicted RBP7.7□□□□□ -1.18
RAPGEF4-213ENST00000535187 LMTK2Q8IWU2 1503 aa7.7□□□□□ -1.18
RAPGEF4-213ENST00000535187 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
RAPGEF4-213ENST00000535187 RPGRIP1LQ68CZ1 1315 aa7.7□□□□□ -1.18
RAPGEF4-213ENST00000535187 LAMC1P11047 1609 aa7.69□□□□□ -1.18
RAPGEF4-213ENST00000535187 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.69□□□□□ -1.18
RAPGEF4-213ENST00000535187 CHD2O14647 1828 aaKnown RBP7.69□□□□□ -1.18
RAPGEF4-213ENST00000535187 CCDC144AA2RUR9 1427 aa7.69□□□□□ -1.18
RAPGEF4-213ENST00000535187 HSPA5P11021 654 aaKnown RBP7.69□□□□□ -1.18
RAPGEF4-213ENST00000535187 ADGRB3O60242 1522 aa7.69□□□□□ -1.18
RAPGEF4-213ENST00000535187 IFFO2Q5TF58 517 aa7.68□□□□□ -1.18
RAPGEF4-213ENST00000535187 STAC3Q96MF2 364 aa7.68□□□□□ -1.18
RAPGEF4-213ENST00000535187 PLEKHG1Q9ULL1 1385 aa7.68□□□□□ -1.18
RAPGEF4-213ENST00000535187 NEFLP07196 543 aa7.68□□□□□ -1.18
RAPGEF4-213ENST00000535187 CCDC184Q52MB2 194 aa7.68□□□□□ -1.18
RAPGEF4-213ENST00000535187 KDM2AQ9Y2K7 1162 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms