RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 APLP1P51693 650 aa4.02□□□□□ -1.77
COPB1-212ENST00000534771 ZFP91Q96JP5 570 aaPredicted RBP4.02□□□□□ -1.77
COPB1-212ENST00000534771 LMOD2Q6P5Q4 547 aa4.01□□□□□ -1.77
COPB1-212ENST00000534771 OXER1Q8TDS5 423 aa4.01□□□□□ -1.77
COPB1-212ENST00000534771 COBLO75128 1261 aa4□□□□□ -1.77
COPB1-212ENST00000534771 ZPR1O75312 459 aa4□□□□□ -1.77
COPB1-212ENST00000534771 SAMD7Q7Z3H4 446 aa4□□□□□ -1.77
COPB1-212ENST00000534771 DSG2Q14126 1118 aa3.99□□□□□ -1.77
COPB1-212ENST00000534771 SPOCK3Q9BQ16 436 aa3.99□□□□□ -1.77
COPB1-212ENST00000534771 MFRPQ9BY79 579 aa3.99□□□□□ -1.77
COPB1-212ENST00000534771 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
COPB1-212ENST00000534771 TTC24A2A3L6 582 aaPredicted RBP3.97□□□□□ -1.77
COPB1-212ENST00000534771 TRIM6-TRIM34B2RNG4 842 aa3.97□□□□□ -1.77
COPB1-212ENST00000534771 KANK3Q6NY19 840 aa3.96□□□□□ -1.78
COPB1-212ENST00000534771 LAMC2Q13753 1193 aa3.95□□□□□ -1.78
COPB1-212ENST00000534771 GALNT6Q8NCL4 622 aa3.95□□□□□ -1.78
COPB1-212ENST00000534771 EVI5O60447 810 aa3.94□□□□□ -1.78
COPB1-212ENST00000534771 RNF40O75150 1001 aa3.94□□□□□ -1.78
COPB1-212ENST00000534771 S1PR4O95977 384 aa3.94□□□□□ -1.78
COPB1-212ENST00000534771 PLA2G4EQ3MJ16 856 aa3.94□□□□□ -1.78
COPB1-212ENST00000534771 PLA2G2CQ5R387 149 aa3.94□□□□□ -1.78
COPB1-212ENST00000534771 GPHNQ9NQX3 736 aaPredicted RBP3.94□□□□□ -1.78
COPB1-212ENST00000534771 SMPD1P17405 629 aa3.92□□□□□ -1.78
COPB1-212ENST00000534771 PCDHGA10Q9Y5H3 936 aa3.92□□□□□ -1.78
COPB1-212ENST00000534771 RIOK3O14730 519 aaKnown RBP3.91□□□□□ -1.78
COPB1-212ENST00000534771 MARSP56192 900 aaKnown RBP3.91□□□□□ -1.78
COPB1-212ENST00000534771 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
COPB1-212ENST00000534771 SMAPO00193 183 aa3.9□□□□□ -1.79
COPB1-212ENST00000534771 VGFO15240 615 aaPredicted RBP3.9□□□□□ -1.79
COPB1-212ENST00000534771 TLL1O43897 1013 aa3.9□□□□□ -1.79
COPB1-212ENST00000534771 PROCP04070 461 aa3.9□□□□□ -1.79
COPB1-212ENST00000534771 PACS2Q86VP3 889 aa3.9□□□□□ -1.79
COPB1-212ENST00000534771 PPP1R37O75864 691 aa3.89□□□□□ -1.79
COPB1-212ENST00000534771 ITGB2P05107 769 aa3.89□□□□□ -1.79
COPB1-212ENST00000534771 FURINP09958 794 aa3.89□□□□□ -1.79
COPB1-212ENST00000534771 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
COPB1-212ENST00000534771 VSIG8P0DPA2 414 aa3.88□□□□□ -1.79
COPB1-212ENST00000534771 HPS1Q92902 700 aa3.88□□□□□ -1.79
COPB1-212ENST00000534771 CD2BP2O95400 341 aaKnown RBP3.87□□□□□ -1.79
COPB1-212ENST00000534771 C6orf132Q5T0Z8 1188 aa3.87□□□□□ -1.79
COPB1-212ENST00000534771 BCL11BQ9C0K0 894 aaPredicted RBP3.87□□□□□ -1.79
COPB1-212ENST00000534771 J3QL48 77 aa3.86□□□□□ -1.79
COPB1-212ENST00000534771 HDGFP51858 240 aaKnown RBP3.86□□□□□ -1.79
COPB1-212ENST00000534771 TYW1BQ6NUM6 668 aa3.86□□□□□ -1.79
COPB1-212ENST00000534771 BLOC1S3Q6QNY0 202 aa3.86□□□□□ -1.79
COPB1-212ENST00000534771 SPOCK2Q92563 424 aa3.86□□□□□ -1.79
COPB1-212ENST00000534771 FBXW7Q969H0 707 aa3.86□□□□□ -1.79
COPB1-212ENST00000534771 SCARF2Q96GP6 870 aaPredicted RBP3.86□□□□□ -1.79
COPB1-212ENST00000534771 TSKSQ9UJT2 592 aa3.86□□□□□ -1.79
COPB1-212ENST00000534771 SLURP2P0DP57 97 aa3.85□□□□□ -1.79
COPB1-212ENST00000534771 BAG6P46379 1132 aa3.85□□□□□ -1.79
COPB1-212ENST00000534771 FKBP8Q14318 412 aa3.85□□□□□ -1.79
COPB1-212ENST00000534771 ZNF385CQ66K41 422 aaPredicted RBP3.85□□□□□ -1.79
COPB1-212ENST00000534771 SVOPQ8N4V2 548 aa3.85□□□□□ -1.79
COPB1-212ENST00000534771 SNIP1Q8TAD8 396 aaKnown RBP3.85□□□□□ -1.79
COPB1-212ENST00000534771 DCAF5Q96JK2 942 aa3.85□□□□□ -1.79
COPB1-212ENST00000534771 PCDHB3Q9Y5E6 796 aa3.85□□□□□ -1.79
COPB1-212ENST00000534771 STK24Q9Y6E0 443 aa3.85□□□□□ -1.79
COPB1-212ENST00000534771 CNTNAP3BQ96NU0 1288 aa3.84□□□□□ -1.79
COPB1-212ENST00000534771 CNTNAP3Q9BZ76 1288 aa3.84□□□□□ -1.79
COPB1-212ENST00000534771 BMP1P13497 986 aa3.83□□□□□ -1.8
COPB1-212ENST00000534771 RPIAP49247 311 aa3.83□□□□□ -1.8
COPB1-212ENST00000534771 TRIM41Q8WV44 630 aa3.83□□□□□ -1.8
COPB1-212ENST00000534771 RNF25Q96BH1 459 aaPredicted RBP3.83□□□□□ -1.8
COPB1-212ENST00000534771 FBXO3Q9UK99 471 aa3.83□□□□□ -1.8
COPB1-212ENST00000534771 KRT76Q01546 638 aa3.82□□□□□ -1.8
COPB1-212ENST00000534771 ARHGEF15O94989 841 aa3.81□□□□□ -1.8
COPB1-212ENST00000534771 VASPP50552 380 aaPredicted RBP3.81□□□□□ -1.8
COPB1-212ENST00000534771 TRIM46Q7Z4K8 759 aa3.81□□□□□ -1.8
COPB1-212ENST00000534771 WHAMMQ8TF30 809 aa3.81□□□□□ -1.8
COPB1-212ENST00000534771 SLC6A16Q9GZN6 736 aa3.81□□□□□ -1.8
COPB1-212ENST00000534771 ARID1BQ8NFD5 2236 aaPredicted RBP3.8□□□□□ -1.8
COPB1-212ENST00000534771 PHF14O94880 888 aa3.8□□□□□ -1.8
COPB1-212ENST00000534771 YBX3P16989 372 aaKnown RBP eCLIP3.8□□□□□ -1.8
COPB1-212ENST00000534771 ZMYM1Q5SVZ6 1142 aa3.8□□□□□ -1.8
COPB1-212ENST00000534771 NECTIN2Q92692 538 aa3.8□□□□□ -1.8
COPB1-212ENST00000534771 MAP3K9P80192 1104 aa3.79□□□□□ -1.8
COPB1-212ENST00000534771 SCO2A0A1W2PP80 73 aa3.78□□□□□ -1.8
COPB1-212ENST00000534771 FZD5Q13467 585 aa3.78□□□□□ -1.8
COPB1-212ENST00000534771 RBM33Q96EV2 1170 aaKnown RBP3.78□□□□□ -1.8
COPB1-212ENST00000534771 SOBPA7XYQ1 873 aa3.77□□□□□ -1.81
COPB1-212ENST00000534771 C3orf80F5H4A9 247 aa3.77□□□□□ -1.81
COPB1-212ENST00000534771 ADH1BP00325 375 aa3.77□□□□□ -1.81
COPB1-212ENST00000534771 GPR161Q8N6U8 529 aaKnown RBP3.77□□□□□ -1.81
COPB1-212ENST00000534771 ZFP42Q96MM3 310 aa3.77□□□□□ -1.81
COPB1-212ENST00000534771 PNMA3Q9UL41 463 aa3.77□□□□□ -1.81
COPB1-212ENST00000534771 TATDN2Q93075 761 aa3.76□□□□□ -1.81
COPB1-212ENST00000534771 WNT7AO00755 349 aa3.75□□□□□ -1.81
COPB1-212ENST00000534771 CNTNAP5Q8WYK1 1306 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 PPFIA3O75145 1194 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 PPP1R15BQ5SWA1 713 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 NBPF11Q86T75 865 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 SLF2Q8IX21 1173 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 MRGPRX2Q96LB1 330 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 PRR14Q9BWN1 585 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 FAM198AQ9UFP1 575 aa3.74□□□□□ -1.81
COPB1-212ENST00000534771 CAPN5O15484 640 aaPredicted RBP3.73□□□□□ -1.81
COPB1-212ENST00000534771 ITGB7P26010 798 aa3.73□□□□□ -1.81
COPB1-212ENST00000534771 SWT1Q5T5J6 900 aaKnown RBP3.73□□□□□ -1.81
COPB1-212ENST00000534771 CDCA7LQ96GN5 454 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms