RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FGD1P98174 961 aa21.6■■□□□ 1.05
PHRF1-206ENST00000534320 ZKSCAN2Q63HK3 967 aa21.6■■□□□ 1.05
PHRF1-206ENST00000534320 RUNDC1Q96C34 613 aa21.6■■□□□ 1.05
PHRF1-206ENST00000534320 CCDC141Q6ZP82 1450 aa21.6■■□□□ 1.05
PHRF1-206ENST00000534320 SLC4A10Q6U841 1118 aa21.59■■□□□ 1.05
PHRF1-206ENST00000534320 HMMRO75330 724 aa21.59■■□□□ 1.05
PHRF1-206ENST00000534320 CABP2Q9NPB3 220 aa21.59■■□□□ 1.05
PHRF1-206ENST00000534320 ELL2O00472 640 aaPredicted RBP21.59■■□□□ 1.05
PHRF1-206ENST00000534320 COG6Q9Y2V7 657 aa21.58■■□□□ 1.04
PHRF1-206ENST00000534320 MFAP1P55081 439 aaKnown RBP21.58■■□□□ 1.04
PHRF1-206ENST00000534320 ADAMTS8Q9UP79 889 aa21.58■■□□□ 1.04
PHRF1-206ENST00000534320 ANKRD30BQ9BXX2 1392 aa21.57■■□□□ 1.04
PHRF1-206ENST00000534320 AKNAQ7Z591 1439 aa21.55■■□□□ 1.04
PHRF1-206ENST00000534320 GOLGA6L6A8MZA4 724 aa21.55■■□□□ 1.04
PHRF1-206ENST00000534320 NRDCO43847 1150 aa21.55■■□□□ 1.04
PHRF1-206ENST00000534320 PDE4AP27815 886 aa21.55■■□□□ 1.04
PHRF1-206ENST00000534320 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
PHRF1-206ENST00000534320 RIPK4P57078 832 aa21.55■■□□□ 1.04
PHRF1-206ENST00000534320 GGNBP2Q9H3C7 697 aa21.55■■□□□ 1.04
PHRF1-206ENST00000534320 KIF14Q15058 1648 aa21.54■■□□□ 1.04
PHRF1-206ENST00000534320 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.54■■□□□ 1.04
PHRF1-206ENST00000534320 SLKQ9H2G2 1235 aaPredicted RBP21.54■■□□□ 1.04
PHRF1-206ENST00000534320 NPHP1O15259 732 aa21.53■■□□□ 1.04
PHRF1-206ENST00000534320 KIAA1211Q6ZU35 1233 aa21.52■■□□□ 1.04
PHRF1-206ENST00000534320 PLCB2Q00722 1185 aa21.51■■□□□ 1.03
PHRF1-206ENST00000534320 TNNT3P45378 269 aaPredicted RBP21.5■■□□□ 1.03
PHRF1-206ENST00000534320 FAM161AQ3B820 660 aa21.5■■□□□ 1.03
PHRF1-206ENST00000534320 HDAC5Q9UQL6 1122 aa21.5■■□□□ 1.03
PHRF1-206ENST00000534320 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
PHRF1-206ENST00000534320 NAP1L2Q9ULW6 460 aaPredicted RBP21.5■■□□□ 1.03
PHRF1-206ENST00000534320 MTHFSP49914 203 aa21.49■■□□□ 1.03
PHRF1-206ENST00000534320 ERBINQ96RT1 1412 aa21.49■■□□□ 1.03
PHRF1-206ENST00000534320 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
PHRF1-206ENST00000534320 PNISRQ8TF01 805 aaKnown RBP21.47■■□□□ 1.03
PHRF1-206ENST00000534320 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
PHRF1-206ENST00000534320 CDCA7LQ96GN5 454 aa21.46■■□□□ 1.03
PHRF1-206ENST00000534320 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
PHRF1-206ENST00000534320 SLC52A1Q9NWF4 448 aa21.46■■□□□ 1.03
PHRF1-206ENST00000534320 DDX19BQ9UMR2 479 aa21.46■■□□□ 1.03
PHRF1-206ENST00000534320 THOC2Q8NI27 1593 aaKnown RBP21.45■■□□□ 1.02
PHRF1-206ENST00000534320 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
PHRF1-206ENST00000534320 TRIM6-TRIM34B2RNG4 842 aa21.44■■□□□ 1.02
PHRF1-206ENST00000534320 SLC12A5Q9H2X9 1139 aa21.44■■□□□ 1.02
PHRF1-206ENST00000534320 GBP4Q96PP9 640 aa21.44■■□□□ 1.02
PHRF1-206ENST00000534320 PRAM1Q96QH2 718 aa21.44■■□□□ 1.02
PHRF1-206ENST00000534320 TAOK2Q9UL54 1235 aa21.43■■□□□ 1.02
PHRF1-206ENST00000534320 HMOX1P09601 288 aa21.42■■□□□ 1.02
PHRF1-206ENST00000534320 ANKRD45Q5TZF3 282 aa21.42■■□□□ 1.02
PHRF1-206ENST00000534320 TCP11L2Q8N4U5 519 aa21.42■■□□□ 1.02
PHRF1-206ENST00000534320 RPGRIP1LQ68CZ1 1315 aa21.41■■□□□ 1.02
PHRF1-206ENST00000534320 GPATCH3Q96I76 525 aa21.41■■□□□ 1.02
PHRF1-206ENST00000534320 GOLGA6L4A6NEF3 574 aa21.41■■□□□ 1.02
PHRF1-206ENST00000534320 GNAI1P63096 354 aa21.4■■□□□ 1.02
PHRF1-206ENST00000534320 C1orf141Q5JVX7 400 aa21.4■■□□□ 1.02
PHRF1-206ENST00000534320 C11orf95C9JLR9 678 aaPredicted RBP21.39■■□□□ 1.02
PHRF1-206ENST00000534320 API5Q9BZZ5 524 aaKnown RBP21.39■■□□□ 1.01
PHRF1-206ENST00000534320 TEFQ10587 303 aa21.39■■□□□ 1.01
PHRF1-206ENST00000534320 RPRD2Q5VT52 1461 aaKnown RBP21.38■■□□□ 1.01
PHRF1-206ENST00000534320 PSME1Q06323 249 aa21.38■■□□□ 1.01
PHRF1-206ENST00000534320 KIF16BQ96L93 1317 aa21.38■■□□□ 1.01
PHRF1-206ENST00000534320 UGGT2Q9NYU1 1516 aa21.38■■□□□ 1.01
PHRF1-206ENST00000534320 FANCIQ9NVI1 1328 aa21.37■■□□□ 1.01
PHRF1-206ENST00000534320 GPATCH8Q9UKJ3 1502 aaKnown RBP21.37■■□□□ 1.01
PHRF1-206ENST00000534320 CHMP3Q9Y3E7 222 aa21.37■■□□□ 1.01
PHRF1-206ENST00000534320 RSPH6AQ9H0K4 717 aa21.37■■□□□ 1.01
PHRF1-206ENST00000534320 PTPRKQ15262 1439 aa21.37■■□□□ 1.01
PHRF1-206ENST00000534320 HSP90AA2PQ14568 343 aaPredicted RBP21.36■■□□□ 1.01
PHRF1-206ENST00000534320 PTMSP20962 102 aa21.36■■□□□ 1.01
PHRF1-206ENST00000534320 RAPGEF6Q8TEU7 1601 aa21.35■■□□□ 1.01
PHRF1-206ENST00000534320 PANK1Q8TE04 598 aa21.35■■□□□ 1.01
PHRF1-206ENST00000534320 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
PHRF1-206ENST00000534320 TXNDC2Q86VQ3 553 aa21.34■■□□□ 1.01
PHRF1-206ENST00000534320 CD109Q6YHK3 1445 aa21.34■■□□□ 1.01
PHRF1-206ENST00000534320 ADGRL1O94910 1474 aa21.34■■□□□ 1.01
PHRF1-206ENST00000534320 AAMPQ13685 434 aa21.33■■□□□ 1.01
PHRF1-206ENST00000534320 CDK19Q9BWU1 502 aa21.33■■□□□ 1
PHRF1-206ENST00000534320 GZF1Q9H116 711 aaPredicted RBP21.32■■□□□ 1
PHRF1-206ENST00000534320 VSIG10Q8N0Z9 540 aa21.32■■□□□ 1
PHRF1-206ENST00000534320 KIAA2012Q0VF49 1180 aa21.31■■□□□ 1
PHRF1-206ENST00000534320 GORABQ5T7V8 394 aa21.31■■□□□ 1
PHRF1-206ENST00000534320 NUP153P49790 1475 aaKnown RBP21.31■■□□□ 1
PHRF1-206ENST00000534320 MAPKBP1O60336 1514 aa21.31■■□□□ 1
PHRF1-206ENST00000534320 CABP1Q9NZU7 370 aa21.3■■□□□ 1
PHRF1-206ENST00000534320 SMG6Q86US8 1419 aaKnown RBP21.3■■□□□ 1
PHRF1-206ENST00000534320 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
PHRF1-206ENST00000534320 SLC4A3P48751 1232 aa21.3■■□□□ 1
PHRF1-206ENST00000534320 TAF7LQ5H9L4 462 aa21.29■■□□□ 1
PHRF1-206ENST00000534320 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
PHRF1-206ENST00000534320 PRKAR2BP31323 418 aa21.28■■□□□ 1
PHRF1-206ENST00000534320 NLRP6P59044 892 aa21.28■■□□□ 1
PHRF1-206ENST00000534320 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
PHRF1-206ENST00000534320 ST18O60284 1047 aa21.28■■□□□ 1
PHRF1-206ENST00000534320 NECTIN2Q92692 538 aa21.28■■□□□ 1
PHRF1-206ENST00000534320 CCDC9Q9Y3X0 531 aaKnown RBP21.27■■□□□ 1
PHRF1-206ENST00000534320 ATP10BO94823 1461 aa21.27■■□□□ 1
PHRF1-206ENST00000534320 NUTM2GQ5VZR2 741 aa21.26■□□□□ 0.99
PHRF1-206ENST00000534320 RILPL2Q969X0 211 aa21.26■□□□□ 0.99
PHRF1-206ENST00000534320 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
PHRF1-206ENST00000534320 FKBP5Q13451 457 aaPredicted RBP21.25■□□□□ 0.99
PHRF1-206ENST00000534320 EXOSC9Q06265 439 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms