RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 AP1G2O75843 785 aa6.64□□□□□ -1.35
C11orf54-213ENST00000533585 SF3A1Q15459 793 aaKnown RBP6.64□□□□□ -1.35
C11orf54-213ENST00000533585 TFIP11Q9UBB9 837 aaKnown RBP6.64□□□□□ -1.35
C11orf54-213ENST00000533585 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
C11orf54-213ENST00000533585 REM2Q8IYK8 340 aaPredicted RBP6.63□□□□□ -1.35
C11orf54-213ENST00000533585 ZNF710Q8N1W2 664 aa6.63□□□□□ -1.35
C11orf54-213ENST00000533585 KIF12Q96FN5 646 aa6.63□□□□□ -1.35
C11orf54-213ENST00000533585 PAK3O75914 559 aaPredicted RBP6.62□□□□□ -1.35
C11orf54-213ENST00000533585 ZNF326Q5BKZ1 582 aaKnown RBP6.62□□□□□ -1.35
C11orf54-213ENST00000533585 POTEHQ6S545 545 aa6.62□□□□□ -1.35
C11orf54-213ENST00000533585 CERS3Q8IU89 383 aa6.62□□□□□ -1.35
C11orf54-213ENST00000533585 UPF1Q92900 1129 aaKnown RBP eCLIP6.62□□□□□ -1.35
C11orf54-213ENST00000533585 FARP1Q9Y4F1 1045 aaPredicted RBP6.62□□□□□ -1.35
C11orf54-213ENST00000533585 CSPP1Q1MSJ5 1256 aa6.61□□□□□ -1.35
C11orf54-213ENST00000533585 TUSC1Q2TAM9 212 aa6.61□□□□□ -1.35
C11orf54-213ENST00000533585 NLRP7Q8WX94 980 aa6.61□□□□□ -1.35
C11orf54-213ENST00000533585 USP17L8P0C7I0 530 aa6.6□□□□□ -1.35
C11orf54-213ENST00000533585 ARID4AP29374 1257 aaPredicted RBP6.6□□□□□ -1.35
C11orf54-213ENST00000533585 VAC14Q08AM6 782 aa6.6□□□□□ -1.35
C11orf54-213ENST00000533585 NAALADL2Q58DX5 795 aa6.6□□□□□ -1.35
C11orf54-213ENST00000533585 CHADLQ6NUI6 762 aa6.6□□□□□ -1.35
C11orf54-213ENST00000533585 HIRIP3Q9BW71 556 aaPredicted RBP6.6□□□□□ -1.35
C11orf54-213ENST00000533585 SPTLC1O15269 473 aa6.59□□□□□ -1.35
C11orf54-213ENST00000533585 KDM4AO75164 1064 aa6.59□□□□□ -1.35
C11orf54-213ENST00000533585 OATP04181 439 aa6.59□□□□□ -1.35
C11orf54-213ENST00000533585 VAMP1P23763 118 aa6.59□□□□□ -1.35
C11orf54-213ENST00000533585 MARSP56192 900 aaKnown RBP6.59□□□□□ -1.35
C11orf54-213ENST00000533585 UBE2Q2Q8WVN8 375 aa6.59□□□□□ -1.35
C11orf54-213ENST00000533585 RBM42Q9BTD8 480 aaKnown RBP6.59□□□□□ -1.35
C11orf54-213ENST00000533585 ALG2Q9H553 416 aa6.59□□□□□ -1.35
C11orf54-213ENST00000533585 CDHR5Q9HBB8 845 aa6.59□□□□□ -1.35
C11orf54-213ENST00000533585 NPDC1Q9NQX5 325 aaPredicted RBP6.59□□□□□ -1.35
C11orf54-213ENST00000533585 NOM1Q5C9Z4 860 aaKnown RBP6.58□□□□□ -1.36
C11orf54-213ENST00000533585 METTL3Q86U44 580 aaKnown RBP6.58□□□□□ -1.36
C11orf54-213ENST00000533585 UCN2Q96RP3 112 aa6.58□□□□□ -1.36
C11orf54-213ENST00000533585 MAFBQ9Y5Q3 323 aaPredicted RBP6.58□□□□□ -1.36
C11orf54-213ENST00000533585 NOL8Q76FK4 1167 aaKnown RBP6.57□□□□□ -1.36
C11orf54-213ENST00000533585 SPIRE2Q8WWL2 714 aa6.57□□□□□ -1.36
C11orf54-213ENST00000533585 L3MBTL3Q96JM7 780 aaPredicted RBP6.57□□□□□ -1.36
C11orf54-213ENST00000533585 GJD4Q96KN9 370 aaPredicted RBP6.57□□□□□ -1.36
C11orf54-213ENST00000533585 PSMD1Q99460 953 aa6.57□□□□□ -1.36
C11orf54-213ENST00000533585 TMEM106CQ9BVX2 250 aa6.57□□□□□ -1.36
C11orf54-213ENST00000533585 ZC3H4Q9UPT8 1303 aaKnown RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 ANKRD33BA6NCL7 494 aa6.56□□□□□ -1.36
C11orf54-213ENST00000533585 SOWAHDA6NJG2 315 aa6.56□□□□□ -1.36
C11orf54-213ENST00000533585 NUTM2BA6NNL0 878 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 NUTM2EB1AL46 878 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 ELOAQ14241 798 aaKnown RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 FAM161AQ3B820 660 aa6.56□□□□□ -1.36
C11orf54-213ENST00000533585 NUTM2DQ5VT03 806 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 RSBN1LQ6PCB5 846 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 NUTM2AQ8IVF1 878 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.56□□□□□ -1.362e-7■■■□□ 17.8
C11orf54-213ENST00000533585 BIN2Q9UBW5 565 aaPredicted RBP6.56□□□□□ -1.36
C11orf54-213ENST00000533585 MAP3K7O43318 606 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 EVI5O60447 810 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 LILRB3O75022 631 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 SOX11P35716 441 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 QPCTQ16769 361 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 RTL5Q5HYW3 569 aaPredicted RBP6.55□□□□□ -1.36
C11orf54-213ENST00000533585 TMEM164Q5U3C3 297 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 PHLDB3Q6NSJ2 640 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 BCL11AQ9H165 835 aa6.55□□□□□ -1.36
C11orf54-213ENST00000533585 C2orf72A6NCS6 295 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 PITPNM1O00562 1244 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 SEMA3FQ13275 785 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 GIMAP6Q6P9H5 292 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 NUTM1Q86Y26 1132 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 NPAS4Q8IUM7 802 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 MICALL2Q8IY33 904 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 PXYLP1Q8TE99 480 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 ZNF592Q92610 1267 aa6.54□□□□□ -1.36
C11orf54-213ENST00000533585 MARCH6O60337 910 aa6.53□□□□□ -1.36
C11orf54-213ENST00000533585 EN1Q05925 392 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-213ENST00000533585 CC2D2BQ6DHV5 1058 aa6.53□□□□□ -1.36
C11orf54-213ENST00000533585 TBC1D9Q6ZT07 1266 aa6.53□□□□□ -1.36
C11orf54-213ENST00000533585 DPH6Q7L8W6 267 aa6.53□□□□□ -1.36
C11orf54-213ENST00000533585 PRR7Q8TB68 274 aa6.53□□□□□ -1.36
C11orf54-213ENST00000533585 STK32AQ8WU08 396 aa6.53□□□□□ -1.36
C11orf54-213ENST00000533585 ATP9BO43861 1147 aa6.52□□□□□ -1.37
C11orf54-213ENST00000533585 SSFA2P28290 1259 aa6.52□□□□□ -1.37
C11orf54-213ENST00000533585 ERCC5P28715 1186 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-213ENST00000533585 ZMIZ1Q9ULJ6 1067 aa6.52□□□□□ -1.37
C11orf54-213ENST00000533585 NOVA2Q9UNW9 492 aaKnown RBP6.52□□□□□ -1.37
C11orf54-213ENST00000533585 MOXD2PA6NHM9 499 aa6.51□□□□□ -1.37
C11orf54-213ENST00000533585 RECKO95980 971 aa6.51□□□□□ -1.37
C11orf54-213ENST00000533585 SERPINB4P48594 390 aa6.51□□□□□ -1.37
C11orf54-213ENST00000533585 TSNAXIP1Q2TAA8 658 aa6.51□□□□□ -1.37
C11orf54-213ENST00000533585 ILDR1Q86SU0 546 aaPredicted RBP6.51□□□□□ -1.37
C11orf54-213ENST00000533585 RBM33Q96EV2 1170 aaKnown RBP6.51□□□□□ -1.37
C11orf54-213ENST00000533585 GJA5P36382 358 aa6.5□□□□□ -1.37
C11orf54-213ENST00000533585 KANK4Q5T7N3 995 aaPredicted RBP6.5□□□□□ -1.37
C11orf54-213ENST00000533585 NOP9Q86U38 636 aaKnown RBP6.5□□□□□ -1.37
C11orf54-213ENST00000533585 EPAS1Q99814 870 aa6.5□□□□□ -1.37
C11orf54-213ENST00000533585 PCDHB15Q9Y5E8 787 aa6.5□□□□□ -1.37
C11orf54-213ENST00000533585 ADGRG1Q9Y653 693 aa6.5□□□□□ -1.37
C11orf54-213ENST00000533585 KIF3CO14782 793 aa6.49□□□□□ -1.37
C11orf54-213ENST00000533585 GPR37L1O60883 481 aa6.49□□□□□ -1.37
C11orf54-213ENST00000533585 NDUFV2P19404 249 aa6.49□□□□□ -1.37
C11orf54-213ENST00000533585 ZNF662Q6ZS27 426 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms