RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 TOM1O60784 492 aa33.53■■■□□ 2.96
BEST1-207ENST00000533521 KCNA6P17658 529 aa33.48■■■□□ 2.95
BEST1-207ENST00000533521 ACIN1Q9UKV3 1341 aaKnown RBP33.48■■■□□ 2.95
BEST1-207ENST00000533521 TRPM2O94759 1503 aa33.48■■■□□ 2.95
BEST1-207ENST00000533521 CHGAP10645 457 aaKnown RBP33.46■■■□□ 2.95
BEST1-207ENST00000533521 SLC26A8Q96RN1 970 aa33.45■■■□□ 2.95
BEST1-207ENST00000533521 PPP1R15AO75807 674 aaPredicted RBP33.44■■■□□ 2.94
BEST1-207ENST00000533521 NWD1Q149M9 1564 aa33.43■■■□□ 2.94
BEST1-207ENST00000533521 TRIM52Q96A61 297 aa33.43■■■□□ 2.94
BEST1-207ENST00000533521 TBX22Q9Y458 520 aa33.43■■■□□ 2.94
BEST1-207ENST00000533521 NKTRP30414 1462 aaKnown RBP33.41■■■□□ 2.94
BEST1-207ENST00000533521 XIRP1Q702N8 1843 aaKnown RBP33.4■■■□□ 2.94
BEST1-207ENST00000533521 DIP2AQ14689 1571 aa33.4■■■□□ 2.94
BEST1-207ENST00000533521 ALKQ9UM73 1620 aa33.39■■■□□ 2.94
BEST1-207ENST00000533521 CHD2O14647 1828 aaKnown RBP33.38■■■□□ 2.93
BEST1-207ENST00000533521 BCANQ96GW7 911 aa33.38■■■□□ 2.93
BEST1-207ENST00000533521 SLC4A1APQ9BWU0 796 aaKnown RBP33.38■■■□□ 2.93
BEST1-207ENST00000533521 CLTCL1P53675 1640 aa33.38■■■□□ 2.93
BEST1-207ENST00000533521 PIK3R4Q99570 1358 aa33.36■■■□□ 2.93
BEST1-207ENST00000533521 KIF1BO60333 1816 aa33.35■■■□□ 2.93
BEST1-207ENST00000533521 ADAMTS13Q76LX8 1427 aa33.35■■■□□ 2.93
BEST1-207ENST00000533521 TMEM94Q12767 1356 aa33.3■■■□□ 2.92
BEST1-207ENST00000533521 PIP4K2BP78356 416 aa33.29■■■□□ 2.92
BEST1-207ENST00000533521 PROSER2Q86WR7 435 aaPredicted RBP33.29■■■□□ 2.92
BEST1-207ENST00000533521 SETBP1Q9Y6X0 1596 aa33.29■■■□□ 2.92
BEST1-207ENST00000533521 SETD5Q9C0A6 1442 aa33.27■■■□□ 2.92
BEST1-207ENST00000533521 NCOA3Q9Y6Q9 1424 aa33.27■■■□□ 2.92
BEST1-207ENST00000533521 NEXMIFQ5QGS0 1516 aa33.25■■■□□ 2.91
BEST1-207ENST00000533521 ZNF326Q5BKZ1 582 aaKnown RBP33.25■■■□□ 2.91
BEST1-207ENST00000533521 SCAF1Q9H7N4 1312 aaKnown RBP33.25■■■□□ 2.91
BEST1-207ENST00000533521 NUTM2DQ5VT03 806 aaPredicted RBP33.24■■■□□ 2.91
BEST1-207ENST00000533521 NRXN3Q9Y4C0 1643 aa33.22■■■□□ 2.91
BEST1-207ENST00000533521 MPHOSPH9Q99550 1183 aa33.22■■■□□ 2.91
BEST1-207ENST00000533521 RPGRIP1LQ68CZ1 1315 aa33.22■■■□□ 2.91
BEST1-207ENST00000533521 HSPA1LP34931 641 aa33.2■■■□□ 2.91
BEST1-207ENST00000533521 FAM135BQ49AJ0 1406 aa33.16■■■□□ 2.9
BEST1-207ENST00000533521 VGFO15240 615 aaPredicted RBP33.15■■■□□ 2.9
BEST1-207ENST00000533521 MSH6P52701 1360 aa33.15■■■□□ 2.9
BEST1-207ENST00000533521 SENP3Q9H4L4 574 aaPredicted RBP33.14■■■□□ 2.9
BEST1-207ENST00000533521 CCDC144AA2RUR9 1427 aa33.12■■■□□ 2.89
BEST1-207ENST00000533521 XRN1Q8IZH2 1706 aaKnown RBP33.11■■■□□ 2.89
BEST1-207ENST00000533521 HRCP23327 699 aa33.1■■■□□ 2.89
BEST1-207ENST00000533521 AMOTL2Q9Y2J4 779 aa33.1■■■□□ 2.89
BEST1-207ENST00000533521 PTPRUQ92729 1446 aa33.1■■■□□ 2.89
BEST1-207ENST00000533521 RAB3GAP2Q9H2M9 1393 aa33.09■■■□□ 2.89
BEST1-207ENST00000533521 PPLO60437 1756 aa33.09■■■□□ 2.89
BEST1-207ENST00000533521 FOXD1Q16676 465 aa33.09■■■□□ 2.89
BEST1-207ENST00000533521 RBM33Q96EV2 1170 aaKnown RBP33.06■■■□□ 2.88
BEST1-207ENST00000533521 DISP3Q9P2K9 1392 aa33.06■■■□□ 2.88
BEST1-207ENST00000533521 SPATA31E1Q6ZUB1 1445 aa33.05■■■□□ 2.88
BEST1-207ENST00000533521 METP08581 1390 aa33.05■■■□□ 2.88
BEST1-207ENST00000533521 C19orf44Q9H6X5 657 aa33.04■■■□□ 2.88
BEST1-207ENST00000533521 SLAIN2Q9P270 581 aa33.01■■■□□ 2.87
BEST1-207ENST00000533521 SETD1AO15047 1707 aaKnown RBP33.01■■■□□ 2.87
BEST1-207ENST00000533521 ROBO1Q9Y6N7 1651 aa33■■■□□ 2.87
BEST1-207ENST00000533521 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.99■■■□□ 2.87
BEST1-207ENST00000533521 ANKRD30BQ9BXX2 1392 aa32.99■■■□□ 2.87
BEST1-207ENST00000533521 CADPS2Q86UW7 1296 aa32.99■■■□□ 2.87
BEST1-207ENST00000533521 DCCP43146 1447 aa32.99■■■□□ 2.87
BEST1-207ENST00000533521 PRAG1Q86YV5 1406 aa32.99■■■□□ 2.87
BEST1-207ENST00000533521 IFT172Q9UG01 1749 aa32.97■■■□□ 2.87
BEST1-207ENST00000533521 C14orf37Q86TY3 774 aa32.95■■■□□ 2.87
BEST1-207ENST00000533521 ATF3P18847 181 aa32.92■■■□□ 2.86
BEST1-207ENST00000533521 PTCH1Q13635 1447 aa32.91■■■□□ 2.86
BEST1-207ENST00000533521 MED1Q15648 1581 aaPredicted RBP32.91■■■□□ 2.86
BEST1-207ENST00000533521 RGL3Q3MIN7 710 aa32.88■■■□□ 2.85
BEST1-207ENST00000533521 ADGRL3Q9HAR2 1447 aa32.85■■■□□ 2.85
BEST1-207ENST00000533521 ADGRF5Q8IZF2 1346 aa32.85■■■□□ 2.85
BEST1-207ENST00000533521 PIK3C2GO75747 1445 aa32.82■■■□□ 2.84
BEST1-207ENST00000533521 PHLPP1O60346 1717 aa32.8■■■□□ 2.84
BEST1-207ENST00000533521 MYOM2P54296 1465 aa32.79■■■□□ 2.84
BEST1-207ENST00000533521 NRXN1Q9ULB1 1477 aa32.79■■■□□ 2.84
BEST1-207ENST00000533521 NALCNQ8IZF0 1738 aa32.78■■■□□ 2.84
BEST1-207ENST00000533521 ROBO2Q9HCK4 1378 aa32.78■■■□□ 2.84
BEST1-207ENST00000533521 AHDC1Q5TGY3 1603 aaPredicted RBP32.77■■■□□ 2.84
BEST1-207ENST00000533521 MST1RQ04912 1400 aa32.77■■■□□ 2.84
BEST1-207ENST00000533521 TECPR2O15040 1411 aa32.76■■■□□ 2.83
BEST1-207ENST00000533521 ILDR2Q71H61 639 aa32.75■■■□□ 2.83
BEST1-207ENST00000533521 COL16A1Q07092 1604 aaPredicted RBP32.73■■■□□ 2.83
BEST1-207ENST00000533521 STAC3Q96MF2 364 aa32.73■■■□□ 2.83
BEST1-207ENST00000533521 LAMC1P11047 1609 aa32.73■■■□□ 2.83
BEST1-207ENST00000533521 LRPPRCP42704 1394 aaKnown RBP32.72■■■□□ 2.83
BEST1-207ENST00000533521 ABCC11Q96J66 1382 aa32.72■■■□□ 2.83
BEST1-207ENST00000533521 BRINP3Q76B58 766 aa32.72■■■□□ 2.83
BEST1-207ENST00000533521 KNDC1Q76NI1 1749 aa32.71■■■□□ 2.83
BEST1-207ENST00000533521 JCADQ9P266 1359 aa32.7■■■□□ 2.83
BEST1-207ENST00000533521 C14orf93Q9H972 538 aaKnown RBP32.7■■■□□ 2.83
BEST1-207ENST00000533521 ASXL1Q8IXJ9 1541 aa32.68■■■□□ 2.82
BEST1-207ENST00000533521 SIRT1Q96EB6 747 aa32.67■■■□□ 2.82
BEST1-207ENST00000533521 NHSL1Q5SYE7 1610 aa32.63■■■□□ 2.81
BEST1-207ENST00000533521 YTHDC2Q9H6S0 1430 aaKnown RBP32.63■■■□□ 2.81
BEST1-207ENST00000533521 PHF23Q9BUL5 403 aaPredicted RBP32.63■■■□□ 2.81
BEST1-207ENST00000533521 C1orf167Q5SNV9 1468 aa32.62■■■□□ 2.81
BEST1-207ENST00000533521 CDC42BPGQ6DT37 1551 aa32.62■■■□□ 2.81
BEST1-207ENST00000533521 TMEM132EQ6IEE7 984 aa32.6■■■□□ 2.81
BEST1-207ENST00000533521 SHPRHQ149N8 1683 aa32.59■■■□□ 2.81
BEST1-207ENST00000533521 DHX57Q6P158 1386 aaKnown RBP32.59■■■□□ 2.81
BEST1-207ENST00000533521 SPATA31A6Q5VVP1 1343 aa32.58■■■□□ 2.81
BEST1-207ENST00000533521 SOCS7O14512 581 aa32.58■■■□□ 2.81
BEST1-207ENST00000533521 STK26Q9P289 416 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms