RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 SLC52A1Q9NWF4 448 aa8.9□□□□□ -0.99
BDNF-217ENST00000533131 PAX3P23760 479 aa8.89□□□□□ -0.99
BDNF-217ENST00000533131 SGSM3Q96HU1 749 aa8.89□□□□□ -0.99
BDNF-217ENST00000533131 SUGT1Q9Y2Z0 365 aa8.89□□□□□ -0.99
BDNF-217ENST00000533131 C9orf131Q5VYM1 1079 aa8.88□□□□□ -0.99
BDNF-217ENST00000533131 SPOCK3Q9BQ16 436 aa8.88□□□□□ -0.99
BDNF-217ENST00000533131 HMGB1P1B2RPK0 211 aaPredicted RBP8.88□□□□□ -0.99
BDNF-217ENST00000533131 CHIC2Q9UKJ5 165 aa8.88□□□□□ -0.99
BDNF-217ENST00000533131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
BDNF-217ENST00000533131 ONECUT3O60422 494 aaPredicted RBP8.88□□□□□ -0.99
BDNF-217ENST00000533131 NAALADL2Q58DX5 795 aa8.88□□□□□ -0.99
BDNF-217ENST00000533131 ZFYVE27Q5T4F4 411 aa8.87□□□□□ -0.99
BDNF-217ENST00000533131 ABL2P42684 1182 aa8.87□□□□□ -0.99
BDNF-217ENST00000533131 KCNA1Q09470 495 aa8.87□□□□□ -0.99
BDNF-217ENST00000533131 WDHD1O75717 1129 aaPredicted RBP8.86□□□□□ -0.99
BDNF-217ENST00000533131 FANCD2Q9BXW9 1451 aa8.86□□□□□ -0.99
BDNF-217ENST00000533131 UBXN4Q92575 508 aa8.86□□□□□ -0.99
BDNF-217ENST00000533131 ARIH1Q9Y4X5 557 aaPredicted RBP8.86□□□□□ -0.99
BDNF-217ENST00000533131 CCER2I3L3R5 266 aa8.85□□□□□ -0.99
BDNF-217ENST00000533131 MRC2Q9UBG0 1479 aa8.85□□□□□ -0.99
BDNF-217ENST00000533131 PDE6BP35913 854 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 IGBP1P78318 339 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 TSNAXIP1Q2TAA8 658 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 EEA1Q15075 1411 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 CEP164Q9UPV0 1460 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 DPH6Q7L8W6 267 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 GDPD2Q9HCC8 539 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 POLR3EQ9NVU0 708 aa8.84□□□□□ -0.99
BDNF-217ENST00000533131 PPP1R15AO75807 674 aaPredicted RBP8.84□□□□□ -0.99
BDNF-217ENST00000533131 CREB3O43889 395 aa8.83□□□□□ -1
BDNF-217ENST00000533131 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
BDNF-217ENST00000533131 BIN2Q9UBW5 565 aaPredicted RBP8.83□□□□□ -1
BDNF-217ENST00000533131 WWC3Q9ULE0 1092 aa8.83□□□□□ -1
BDNF-217ENST00000533131 VPS8Q8N3P4 1428 aa8.83□□□□□ -1
BDNF-217ENST00000533131 PDS5BQ9NTI5 1447 aa8.83□□□□□ -1
BDNF-217ENST00000533131 TMA7Q9Y2S6 64 aaKnown RBP8.82□□□□□ -1
BDNF-217ENST00000533131 SALL2Q9Y467 1007 aaPredicted RBP8.82□□□□□ -1
BDNF-217ENST00000533131 IBSPP21815 317 aaPredicted RBP8.82□□□□□ -1
BDNF-217ENST00000533131 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
BDNF-217ENST00000533131 CREBRFQ8IUR6 639 aa8.82□□□□□ -1
BDNF-217ENST00000533131 IQSEC3Q9UPP2 1182 aaPredicted RBP8.82□□□□□ -1
BDNF-217ENST00000533131 RAPGEF2Q9Y4G8 1499 aa8.82□□□□□ -1
BDNF-217ENST00000533131 PARP9Q8IXQ6 854 aa8.82□□□□□ -1
BDNF-217ENST00000533131 TANGO6Q9C0B7 1094 aa8.82□□□□□ -1
BDNF-217ENST00000533131 TONSLQ96HA7 1378 aa8.82□□□□□ -1
BDNF-217ENST00000533131 VGFO15240 615 aaPredicted RBP8.81□□□□□ -1
BDNF-217ENST00000533131 GTF2F1P35269 517 aaKnown RBP eCLIP8.81□□□□□ -1
BDNF-217ENST00000533131 PMFBP1Q8TBY8 1022 aa8.81□□□□□ -1
BDNF-217ENST00000533131 METTL14Q9HCE5 456 aaKnown RBP8.81□□□□□ -1
BDNF-217ENST00000533131 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
BDNF-217ENST00000533131 TARBP1Q13395 1621 aaKnown RBP8.81□□□□□ -1
BDNF-217ENST00000533131 FTSJ3Q8IY81 847 aaKnown RBP8.8□□□□□ -1
BDNF-217ENST00000533131 EVI5LQ96CN4 794 aa8.8□□□□□ -1
BDNF-217ENST00000533131 RRP7BPQ9NSQ0 103 aa8.8□□□□□ -1
BDNF-217ENST00000533131 ZNF16P17020 682 aaPredicted RBP8.8□□□□□ -1
BDNF-217ENST00000533131 DHX57Q6P158 1386 aaKnown RBP8.8□□□□□ -1
BDNF-217ENST00000533131 APPP05067 770 aa8.8□□□□□ -1
BDNF-217ENST00000533131 GLMNQ92990 594 aa8.8□□□□□ -1
BDNF-217ENST00000533131 KCNG1Q9UIX4 513 aa8.8□□□□□ -1
BDNF-217ENST00000533131 ZC3H6P61129 1189 aaKnown RBP8.79□□□□□ -1
BDNF-217ENST00000533131 CCDC181Q5TID7 509 aa8.79□□□□□ -1
BDNF-217ENST00000533131 COG6Q9Y2V7 657 aa8.79□□□□□ -1
BDNF-217ENST00000533131 POLD1P28340 1107 aa8.79□□□□□ -1
BDNF-217ENST00000533131 IPO4Q8TEX9 1081 aaKnown RBP8.78□□□□□ -1
BDNF-217ENST00000533131 RBM19Q9Y4C8 960 aaKnown RBP8.78□□□□□ -1
BDNF-217ENST00000533131 WDR97A6NE52 1622 aa8.78□□□□□ -1
BDNF-217ENST00000533131 POM121CA8CG34 1229 aa8.78□□□□□ -1
BDNF-217ENST00000533131 CDCA7Q9BWT1 371 aaPredicted RBP8.78□□□□□ -1
BDNF-217ENST00000533131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -1
BDNF-217ENST00000533131 CCNB3Q8WWL7 1395 aa8.78□□□□□ -1
BDNF-217ENST00000533131 NUTM2FA1L443 756 aa8.78□□□□□ -1
BDNF-217ENST00000533131 LONRF3Q496Y0 759 aa8.78□□□□□ -1
BDNF-217ENST00000533131 SOX12O15370 315 aa8.77□□□□□ -1.01
BDNF-217ENST00000533131 ERCC5P28715 1186 aaPredicted RBP8.77□□□□□ -1.01
BDNF-217ENST00000533131 VRTNQ9H8Y1 702 aa8.77□□□□□ -1.01
BDNF-217ENST00000533131 ZNF608Q9ULD9 1512 aaPredicted RBP8.77□□□□□ -1.01
BDNF-217ENST00000533131 ARMCX6Q7L4S7 300 aa8.77□□□□□ -1.01
BDNF-217ENST00000533131 ZBTB47Q9UFB7 747 aaPredicted RBP8.77□□□□□ -1.01
BDNF-217ENST00000533131 TOPBP1Q92547 1522 aa8.76□□□□□ -1.01
BDNF-217ENST00000533131 SF3A1Q15459 793 aaKnown RBP8.76□□□□□ -1.01
BDNF-217ENST00000533131 CCDC102AQ96A19 550 aa8.76□□□□□ -1.01
BDNF-217ENST00000533131 PBXIP1Q96AQ6 731 aa8.76□□□□□ -1.01
BDNF-217ENST00000533131 PARNO95453 639 aaKnown RBP8.76□□□□□ -1.01
BDNF-217ENST00000533131 CCDC146Q8IYE0 955 aa8.76□□□□□ -1.01
BDNF-217ENST00000533131 RAB3GAP2Q9H2M9 1393 aa8.76□□□□□ -1.01
BDNF-217ENST00000533131 DHX38Q92620 1227 aaKnown RBP8.76□□□□□ -1.01
BDNF-217ENST00000533131 GPATCH3Q96I76 525 aa8.76□□□□□ -1.01
BDNF-217ENST00000533131 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
BDNF-217ENST00000533131 HSP90AB2PQ58FF8 381 aa8.75□□□□□ -1.01
BDNF-217ENST00000533131 FNBP4Q8N3X1 1017 aaPredicted RBP8.75□□□□□ -1.01
BDNF-217ENST00000533131 MRS2Q9HD23 443 aa8.75□□□□□ -1.01
BDNF-217ENST00000533131 RBM47A0AV96 593 aaKnown RBP8.74□□□□□ -1.01
BDNF-217ENST00000533131 CUX1P39880 1505 aa8.74□□□□□ -1.01
BDNF-217ENST00000533131 B4GALNT3Q6L9W6 998 aa8.74□□□□□ -1.01
BDNF-217ENST00000533131 PMM1Q92871 262 aa8.74□□□□□ -1.01
BDNF-217ENST00000533131 EIF4G3O43432 1585 aaKnown RBP8.74□□□□□ -1.01
BDNF-217ENST00000533131 DNMBPQ6XZF7 1577 aa8.74□□□□□ -1.01
BDNF-217ENST00000533131 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
BDNF-217ENST00000533131 SNRKQ9NRH2 765 aa8.74□□□□□ -1.01
BDNF-217ENST00000533131 SBNO2Q9Y2G9 1366 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms