RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PRDM15P57071 1507 aaPredicted RBP14.33□□□□□ -0.12
NEDD8-206ENST00000531430 MAP3K1Q13233 1512 aa14.33□□□□□ -0.12
NEDD8-206ENST00000531430 ATF3P18847 181 aa14.32□□□□□ -0.12
NEDD8-206ENST00000531430 JCADQ9P266 1359 aa14.32□□□□□ -0.12
NEDD8-206ENST00000531430 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
NEDD8-206ENST00000531430 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
NEDD8-206ENST00000531430 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
NEDD8-206ENST00000531430 TET3O43151 1660 aa14.3□□□□□ -0.12
NEDD8-206ENST00000531430 FGD6Q6ZV73 1430 aa14.3□□□□□ -0.12
NEDD8-206ENST00000531430 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.29□□□□□ -0.12
NEDD8-206ENST00000531430 TBX22Q9Y458 520 aa14.29□□□□□ -0.12
NEDD8-206ENST00000531430 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
NEDD8-206ENST00000531430 NOS1P29475 1434 aa14.28□□□□□ -0.12
NEDD8-206ENST00000531430 ZNF772Q68DY9 489 aaPredicted RBP14.28□□□□□ -0.12
NEDD8-206ENST00000531430 RIMS2Q9UQ26 1411 aa14.28□□□□□ -0.12
NEDD8-206ENST00000531430 CROCC2H7BZ55 1655 aa14.27□□□□□ -0.12
NEDD8-206ENST00000531430 CADPS2Q86UW7 1296 aa14.27□□□□□ -0.13
NEDD8-206ENST00000531430 LMTK2Q8IWU2 1503 aa14.26□□□□□ -0.13
NEDD8-206ENST00000531430 PLEKHG1Q9ULL1 1385 aa14.26□□□□□ -0.13
NEDD8-206ENST00000531430 C19orf44Q9H6X5 657 aa14.26□□□□□ -0.13
NEDD8-206ENST00000531430 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
NEDD8-206ENST00000531430 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
NEDD8-206ENST00000531430 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
NEDD8-206ENST00000531430 RXRBP28702 533 aa14.25□□□□□ -0.13
NEDD8-206ENST00000531430 ITGAEP38570 1179 aa14.25□□□□□ -0.13
NEDD8-206ENST00000531430 AMOTL2Q9Y2J4 779 aa14.25□□□□□ -0.13
NEDD8-206ENST00000531430 ANKRD50Q9ULJ7 1429 aa14.24□□□□□ -0.13
NEDD8-206ENST00000531430 SPATA31A6Q5VVP1 1343 aa14.24□□□□□ -0.13
NEDD8-206ENST00000531430 UPF1Q92900 1129 aaKnown RBP eCLIP14.24□□□□□ -0.133e-7■□□□□ 10.1
NEDD8-206ENST00000531430 KDM5AP29375 1690 aaKnown RBP14.23□□□□□ -0.13
NEDD8-206ENST00000531430 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
NEDD8-206ENST00000531430 ZFYVE9O95405 1425 aa14.21□□□□□ -0.13
NEDD8-206ENST00000531430 CHD2O14647 1828 aaKnown RBP14.2□□□□□ -0.14
NEDD8-206ENST00000531430 MYO5BQ9ULV0 1848 aa14.2□□□□□ -0.14
NEDD8-206ENST00000531430 BRINP3Q76B58 766 aa14.2□□□□□ -0.14
NEDD8-206ENST00000531430 NWD1Q149M9 1564 aa14.2□□□□□ -0.14
NEDD8-206ENST00000531430 LRP6O75581 1613 aa14.18□□□□□ -0.14
NEDD8-206ENST00000531430 RPRD2Q5VT52 1461 aaKnown RBP14.18□□□□□ -0.14
NEDD8-206ENST00000531430 AFF2P51816 1311 aa14.17□□□□□ -0.14
NEDD8-206ENST00000531430 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
NEDD8-206ENST00000531430 NCOA3Q9Y6Q9 1424 aa14.17□□□□□ -0.14
NEDD8-206ENST00000531430 DDX17Q92841 729 aaKnown RBP14.17□□□□□ -0.14
NEDD8-206ENST00000531430 C8orf37Q96NL8 207 aa14.17□□□□□ -0.14
NEDD8-206ENST00000531430 TMEM131LA2VDJ0 1609 aa14.16□□□□□ -0.14
NEDD8-206ENST00000531430 PPARGC1BQ86YN6 1023 aaKnown RBP14.16□□□□□ -0.14
NEDD8-206ENST00000531430 LRRC59Q96AG4 307 aaKnown RBP14.16□□□□□ -0.14
NEDD8-206ENST00000531430 QTRT2Q9H974 415 aaKnown RBP14.16□□□□□ -0.14
NEDD8-206ENST00000531430 NUP155O75694 1391 aa14.16□□□□□ -0.14
NEDD8-206ENST00000531430 ADGRL2O95490 1459 aa14.16□□□□□ -0.14
NEDD8-206ENST00000531430 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
NEDD8-206ENST00000531430 COL16A1Q07092 1604 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-206ENST00000531430 ADAMTS2O95450 1211 aa14.15□□□□□ -0.14
NEDD8-206ENST00000531430 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-206ENST00000531430 PIK3R4Q99570 1358 aa14.14□□□□□ -0.15
NEDD8-206ENST00000531430 NGLY1Q96IV0 654 aa14.14□□□□□ -0.15
NEDD8-206ENST00000531430 PTPRUQ92729 1446 aa14.12□□□□□ -0.15
NEDD8-206ENST00000531430 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
NEDD8-206ENST00000531430 TRPM2O94759 1503 aa14.1□□□□□ -0.15
NEDD8-206ENST00000531430 AHDC1Q5TGY3 1603 aaPredicted RBP14.08□□□□□ -0.15
NEDD8-206ENST00000531430 E9PCH4 1651 aa14.08□□□□□ -0.16
NEDD8-206ENST00000531430 METP08581 1390 aa14.08□□□□□ -0.16
NEDD8-206ENST00000531430 SHPRHQ149N8 1683 aa14.07□□□□□ -0.16
NEDD8-206ENST00000531430 DIP2AQ14689 1571 aa14.06□□□□□ -0.16
NEDD8-206ENST00000531430 ORAI2Q96SN7 254 aa14.05□□□□□ -0.16
NEDD8-206ENST00000531430 USP21Q9UK80 565 aa14.05□□□□□ -0.16
NEDD8-206ENST00000531430 MST1RQ04912 1400 aa14.05□□□□□ -0.16
NEDD8-206ENST00000531430 SETD5Q9C0A6 1442 aa14.05□□□□□ -0.16
NEDD8-206ENST00000531430 ASXL1Q8IXJ9 1541 aa14.05□□□□□ -0.16
NEDD8-206ENST00000531430 UNC13BO14795 1591 aa14.05□□□□□ -0.16
NEDD8-206ENST00000531430 ROCK1Q13464 1354 aa14.04□□□□□ -0.16
NEDD8-206ENST00000531430 PNPLA6Q8IY17 1366 aa14.03□□□□□ -0.16
NEDD8-206ENST00000531430 DCCP43146 1447 aa14.02□□□□□ -0.16
NEDD8-206ENST00000531430 TRPC5Q9UL62 973 aaPredicted RBP14.01□□□□□ -0.17
NEDD8-206ENST00000531430 IQGAP3Q86VI3 1631 aa14.01□□□□□ -0.17
NEDD8-206ENST00000531430 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
NEDD8-206ENST00000531430 RGS12O14924 1447 aa14□□□□□ -0.17
NEDD8-206ENST00000531430 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
NEDD8-206ENST00000531430 ESCO1Q5FWF5 840 aa14□□□□□ -0.17
NEDD8-206ENST00000531430 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
NEDD8-206ENST00000531430 FOXD1Q16676 465 aa13.99□□□□□ -0.17
NEDD8-206ENST00000531430 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
NEDD8-206ENST00000531430 ADGRL3Q9HAR2 1447 aa13.98□□□□□ -0.17
NEDD8-206ENST00000531430 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
NEDD8-206ENST00000531430 ATAD2Q6PL18 1390 aa13.97□□□□□ -0.17
NEDD8-206ENST00000531430 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
NEDD8-206ENST00000531430 STK26Q9P289 416 aa13.97□□□□□ -0.17
NEDD8-206ENST00000531430 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
NEDD8-206ENST00000531430 FOXO3O43524 673 aa13.96□□□□□ -0.17
NEDD8-206ENST00000531430 NHSL1Q5SYE7 1610 aa13.96□□□□□ -0.17
NEDD8-206ENST00000531430 NRXN3Q9Y4C0 1643 aa13.96□□□□□ -0.17
NEDD8-206ENST00000531430 SETBP1Q9Y6X0 1596 aa13.96□□□□□ -0.18
NEDD8-206ENST00000531430 XRN1Q8IZH2 1706 aaKnown RBP13.95□□□□□ -0.18
NEDD8-206ENST00000531430 SOS2Q07890 1332 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-206ENST00000531430 SPHKAPQ2M3C7 1700 aa13.94□□□□□ -0.18
NEDD8-206ENST00000531430 FNBP4Q8N3X1 1017 aaPredicted RBP13.94□□□□□ -0.18
NEDD8-206ENST00000531430 ROBO2Q9HCK4 1378 aa13.94□□□□□ -0.18
NEDD8-206ENST00000531430 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
NEDD8-206ENST00000531430 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
NEDD8-206ENST00000531430 NALCNQ8IZF0 1738 aa13.91□□□□□ -0.18
NEDD8-206ENST00000531430 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms