RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 HIC1Q14526 733 aa14.37□□□□□ -0.11
CHKA-205ENST00000530730 DNAJB2P25686 324 aa14.36□□□□□ -0.11
CHKA-205ENST00000530730 SLC4A3P48751 1232 aa14.36□□□□□ -0.11
CHKA-205ENST00000530730 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
CHKA-205ENST00000530730 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.12
CHKA-205ENST00000530730 RBM26Q5T8P6 1007 aaKnown RBP14.33□□□□□ -0.12
CHKA-205ENST00000530730 TMEM134Q9H6X4 195 aa14.33□□□□□ -0.12
CHKA-205ENST00000530730 RNF40O75150 1001 aa14.31□□□□□ -0.12
CHKA-205ENST00000530730 APLP1P51693 650 aa14.3□□□□□ -0.12
CHKA-205ENST00000530730 GPR37O15354 613 aa14.29□□□□□ -0.12
CHKA-205ENST00000530730 OATP04181 439 aa14.29□□□□□ -0.12
CHKA-205ENST00000530730 RCCD1A6NED2 376 aa14.28□□□□□ -0.12
CHKA-205ENST00000530730 GNPATO15228 680 aa14.28□□□□□ -0.12
CHKA-205ENST00000530730 PRR14Q9BWN1 585 aa14.28□□□□□ -0.12
CHKA-205ENST00000530730 IL21Q9HBE4 155 aa14.28□□□□□ -0.12
CHKA-205ENST00000530730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.13
CHKA-205ENST00000530730 MTRQ99707 1265 aa14.27□□□□□ -0.13
CHKA-205ENST00000530730 PXYLP1Q8TE99 480 aa14.26□□□□□ -0.13
CHKA-205ENST00000530730 FAM161AQ3B820 660 aa14.23□□□□□ -0.13
CHKA-205ENST00000530730 METTL3Q86U44 580 aaKnown RBP14.22□□□□□ -0.13
CHKA-205ENST00000530730 GPIHBP1Q8IV16 184 aa14.19□□□□□ -0.14
CHKA-205ENST00000530730 FECHP22830 423 aa14.18□□□□□ -0.14
CHKA-205ENST00000530730 TULP1O00294 542 aaPredicted RBP14.16□□□□□ -0.14
CHKA-205ENST00000530730 KMT5BQ4FZB7 885 aa14.15□□□□□ -0.14
CHKA-205ENST00000530730 ZNF516Q92618 1163 aa14.15□□□□□ -0.14
CHKA-205ENST00000530730 ACTN4O43707 911 aaKnown RBP14.14□□□□□ -0.15
CHKA-205ENST00000530730 PCDHB3Q9Y5E6 796 aa14.14□□□□□ -0.15
CHKA-205ENST00000530730 SLC10A3P09131 477 aa14.12□□□□□ -0.15
CHKA-205ENST00000530730 ZPR1O75312 459 aa14.11□□□□□ -0.15
CHKA-205ENST00000530730 COPS2P61201 443 aa14.11□□□□□ -0.15
CHKA-205ENST00000530730 CFHP08603 1231 aa14.1□□□□□ -0.15
CHKA-205ENST00000530730 RSPH4AQ5TD94 716 aa14.1□□□□□ -0.15
CHKA-205ENST00000530730 DAXXQ9UER7 740 aaPredicted RBP14.1□□□□□ -0.15
CHKA-205ENST00000530730 PPP1R18Q6NYC8 613 aa14.08□□□□□ -0.16
CHKA-205ENST00000530730 BLOC1S3Q6QNY0 202 aa14.07□□□□□ -0.16
CHKA-205ENST00000530730 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
CHKA-205ENST00000530730 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.07□□□□□ -0.16
CHKA-205ENST00000530730 TMUB1Q9BVT8 246 aa14.06□□□□□ -0.16
CHKA-205ENST00000530730 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
CHKA-205ENST00000530730 GGCXP38435 758 aa14.04□□□□□ -0.16
CHKA-205ENST00000530730 MAP2K5Q13163 448 aa14.04□□□□□ -0.16
CHKA-205ENST00000530730 PHOX2BQ99453 314 aa14.02□□□□□ -0.17
CHKA-205ENST00000530730 SULF1Q8IWU6 871 aa14.01□□□□□ -0.17
CHKA-205ENST00000530730 V9GY48 417 aaPredicted RBP14.01□□□□□ -0.17
CHKA-205ENST00000530730 NR1I2O75469 434 aa13.99□□□□□ -0.17
CHKA-205ENST00000530730 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
CHKA-205ENST00000530730 IRF6O14896 467 aa13.97□□□□□ -0.17
CHKA-205ENST00000530730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHKA-205ENST00000530730 PRKD2Q9BZL6 878 aa13.97□□□□□ -0.17
CHKA-205ENST00000530730 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
CHKA-205ENST00000530730 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
CHKA-205ENST00000530730 NLRP7Q8WX94 980 aa13.94□□□□□ -0.18
CHKA-205ENST00000530730 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
CHKA-205ENST00000530730 TLL1O43897 1013 aa13.93□□□□□ -0.18
CHKA-205ENST00000530730 ADH1BP00325 375 aa13.93□□□□□ -0.18
CHKA-205ENST00000530730 GCGRP47871 477 aa13.93□□□□□ -0.18
CHKA-205ENST00000530730 LAPTM4AQ15012 233 aa13.93□□□□□ -0.18
CHKA-205ENST00000530730 SCUBE3Q8IX30 993 aa13.92□□□□□ -0.18
CHKA-205ENST00000530730 RNF223E7ERA6 249 aa13.9□□□□□ -0.18
CHKA-205ENST00000530730 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
CHKA-205ENST00000530730 MORN1Q5T089 497 aa13.89□□□□□ -0.19
CHKA-205ENST00000530730 ANKLE1Q8NAG6 615 aa13.89□□□□□ -0.19
CHKA-205ENST00000530730 FUT2Q10981 343 aa13.88□□□□□ -0.19
CHKA-205ENST00000530730 PUS10Q3MIT2 529 aaKnown RBP13.88□□□□□ -0.19
CHKA-205ENST00000530730 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
CHKA-205ENST00000530730 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
CHKA-205ENST00000530730 CCDC102AQ96A19 550 aa13.87□□□□□ -0.19
CHKA-205ENST00000530730 CD46P15529 392 aa13.86□□□□□ -0.19
CHKA-205ENST00000530730 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
CHKA-205ENST00000530730 S1PR4O95977 384 aa13.85□□□□□ -0.19
CHKA-205ENST00000530730 SPSB2Q99619 263 aa13.84□□□□□ -0.19
CHKA-205ENST00000530730 SLC6A16Q9GZN6 736 aa13.84□□□□□ -0.19
CHKA-205ENST00000530730 GRIPAP1Q4V328 841 aa13.83□□□□□ -0.2
CHKA-205ENST00000530730 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
CHKA-205ENST00000530730 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
CHKA-205ENST00000530730 EMID1Q96A84 441 aaPredicted RBP13.8□□□□□ -0.2
CHKA-205ENST00000530730 SLC27A5Q9Y2P5 690 aa13.8□□□□□ -0.2
CHKA-205ENST00000530730 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
CHKA-205ENST00000530730 NRG2O14511 850 aaPredicted RBP13.79□□□□□ -0.2
CHKA-205ENST00000530730 GFRA3O60609 400 aa13.79□□□□□ -0.2
CHKA-205ENST00000530730 CLCN1P35523 988 aa13.79□□□□□ -0.2
CHKA-205ENST00000530730 SLC19A1P41440 591 aa13.79□□□□□ -0.2
CHKA-205ENST00000530730 BARGINQ6ZT62 677 aa13.79□□□□□ -0.2
CHKA-205ENST00000530730 ZMYND10O75800 440 aa13.78□□□□□ -0.2
CHKA-205ENST00000530730 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
CHKA-205ENST00000530730 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
CHKA-205ENST00000530730 SMARCA2P51531 1590 aa13.78□□□□□ -0.2
CHKA-205ENST00000530730 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
CHKA-205ENST00000530730 CUX2O14529 1486 aa13.77□□□□□ -0.21
CHKA-205ENST00000530730 USP46P62068 366 aa13.77□□□□□ -0.21
CHKA-205ENST00000530730 BRICD5Q6PL45 260 aa13.76□□□□□ -0.21
CHKA-205ENST00000530730 Q6ZNB5 142 aa13.76□□□□□ -0.21
CHKA-205ENST00000530730 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
CHKA-205ENST00000530730 KDM4AO75164 1064 aa13.75□□□□□ -0.21
CHKA-205ENST00000530730 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
CHKA-205ENST00000530730 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
CHKA-205ENST00000530730 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
CHKA-205ENST00000530730 FAM217BQ9NTX9 383 aaPredicted RBP13.74□□□□□ -0.21
CHKA-205ENST00000530730 Q3C1V9 767 aa13.73□□□□□ -0.21
CHKA-205ENST00000530730 MSS51Q4VC12 460 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms