RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 SETD5Q9C0A6 1442 aa23.29■■□□□ 1.32
CTSB-219ENST00000530640 IQGAP3Q86VI3 1631 aa23.28■■□□□ 1.32
CTSB-219ENST00000530640 KCNA6P17658 529 aa23.27■■□□□ 1.32
CTSB-219ENST00000530640 HDGFP51858 240 aaKnown RBP23.27■■□□□ 1.31
CTSB-219ENST00000530640 ADGRB3O60242 1522 aa23.25■■□□□ 1.31
CTSB-219ENST00000530640 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
CTSB-219ENST00000530640 FAM135BQ49AJ0 1406 aa23.24■■□□□ 1.31
CTSB-219ENST00000530640 E9PCH4 1651 aa23.23■■□□□ 1.31
CTSB-219ENST00000530640 NUP155O75694 1391 aa23.2■■□□□ 1.3
CTSB-219ENST00000530640 TMEM94Q12767 1356 aa23.18■■□□□ 1.3
CTSB-219ENST00000530640 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
CTSB-219ENST00000530640 HRCP23327 699 aa23.16■■□□□ 1.3
CTSB-219ENST00000530640 SLC26A8Q96RN1 970 aa23.15■■□□□ 1.3
CTSB-219ENST00000530640 NKTRP30414 1462 aaKnown RBP23.15■■□□□ 1.3
CTSB-219ENST00000530640 XIRP1Q702N8 1843 aaKnown RBP23.14■■□□□ 1.29
CTSB-219ENST00000530640 BCANQ96GW7 911 aa23.14■■□□□ 1.29
CTSB-219ENST00000530640 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
CTSB-219ENST00000530640 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
CTSB-219ENST00000530640 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
CTSB-219ENST00000530640 PLEKHG1Q9ULL1 1385 aa23.11■■□□□ 1.29
CTSB-219ENST00000530640 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
CTSB-219ENST00000530640 MSH6P52701 1360 aa23.1■■□□□ 1.29
CTSB-219ENST00000530640 NWD1Q149M9 1564 aa23.09■■□□□ 1.29
CTSB-219ENST00000530640 NCOA3Q9Y6Q9 1424 aa23.09■■□□□ 1.29
CTSB-219ENST00000530640 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
CTSB-219ENST00000530640 TBX22Q9Y458 520 aa23.09■■□□□ 1.29
CTSB-219ENST00000530640 SPHKAPQ2M3C7 1700 aa23.08■■□□□ 1.29
CTSB-219ENST00000530640 ZFYVE9O95405 1425 aa23.08■■□□□ 1.29
CTSB-219ENST00000530640 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
CTSB-219ENST00000530640 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
CTSB-219ENST00000530640 CHGAP10645 457 aaKnown RBP23.05■■□□□ 1.28
CTSB-219ENST00000530640 SLAIN2Q9P270 581 aa23.05■■□□□ 1.28
CTSB-219ENST00000530640 PIK3R4Q99570 1358 aa23.03■■□□□ 1.28
CTSB-219ENST00000530640 RGS17Q9UGC6 210 aaPredicted RBP23.02■■□□□ 1.28
CTSB-219ENST00000530640 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
CTSB-219ENST00000530640 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
CTSB-219ENST00000530640 CHD2O14647 1828 aaKnown RBP22.99■■□□□ 1.27
CTSB-219ENST00000530640 TRPM2O94759 1503 aa22.98■■□□□ 1.27
CTSB-219ENST00000530640 TRIM52Q96A61 297 aa22.98■■□□□ 1.27
CTSB-219ENST00000530640 RBM33Q96EV2 1170 aaKnown RBP22.98■■□□□ 1.27
CTSB-219ENST00000530640 DIP2AQ14689 1571 aa22.96■■□□□ 1.27
CTSB-219ENST00000530640 CADPS2Q86UW7 1296 aa22.96■■□□□ 1.27
CTSB-219ENST00000530640 JCADQ9P266 1359 aa22.96■■□□□ 1.27
CTSB-219ENST00000530640 CLTCL1P53675 1640 aa22.95■■□□□ 1.27
CTSB-219ENST00000530640 C19orf44Q9H6X5 657 aa22.95■■□□□ 1.26
CTSB-219ENST00000530640 ADAMTS13Q76LX8 1427 aa22.92■■□□□ 1.26
CTSB-219ENST00000530640 C14orf37Q86TY3 774 aa22.92■■□□□ 1.26
CTSB-219ENST00000530640 ATF3P18847 181 aa22.91■■□□□ 1.26
CTSB-219ENST00000530640 NUTM2DQ5VT03 806 aaPredicted RBP22.91■■□□□ 1.26
CTSB-219ENST00000530640 SLC4A1APQ9BWU0 796 aaKnown RBP22.89■■□□□ 1.26
CTSB-219ENST00000530640 KIF1BO60333 1816 aa22.89■■□□□ 1.26
CTSB-219ENST00000530640 SPATA31A6Q5VVP1 1343 aa22.89■■□□□ 1.25
CTSB-219ENST00000530640 POTEAQ6S8J7 498 aa22.88■■□□□ 1.25
CTSB-219ENST00000530640 PHLPP1O60346 1717 aa22.87■■□□□ 1.25
CTSB-219ENST00000530640 ZNF326Q5BKZ1 582 aaKnown RBP22.87■■□□□ 1.25
CTSB-219ENST00000530640 AMOTL2Q9Y2J4 779 aa22.87■■□□□ 1.25
CTSB-219ENST00000530640 MPHOSPH9Q99550 1183 aa22.86■■□□□ 1.25
CTSB-219ENST00000530640 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
CTSB-219ENST00000530640 NEXMIFQ5QGS0 1516 aa22.84■■□□□ 1.25
CTSB-219ENST00000530640 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
CTSB-219ENST00000530640 DCCP43146 1447 aa22.83■■□□□ 1.25
CTSB-219ENST00000530640 NRXN3Q9Y4C0 1643 aa22.83■■□□□ 1.25
CTSB-219ENST00000530640 CCER1Q8TC90 406 aaPredicted RBP22.83■■□□□ 1.25
CTSB-219ENST00000530640 ZNF772Q68DY9 489 aaPredicted RBP22.81■■□□□ 1.24
CTSB-219ENST00000530640 COL16A1Q07092 1604 aaPredicted RBP22.8■■□□□ 1.24
CTSB-219ENST00000530640 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.8■■□□□ 1.24
CTSB-219ENST00000530640 AHDC1Q5TGY3 1603 aaPredicted RBP22.79■■□□□ 1.24
CTSB-219ENST00000530640 PTPRUQ92729 1446 aa22.76■■□□□ 1.23
CTSB-219ENST00000530640 FOXD1Q16676 465 aa22.76■■□□□ 1.23
CTSB-219ENST00000530640 MEX3CQ5U5Q3 659 aaKnown RBP22.76■■□□□ 1.23
CTSB-219ENST00000530640 ANKRD30BQ9BXX2 1392 aa22.75■■□□□ 1.23
CTSB-219ENST00000530640 BRINP3Q76B58 766 aa22.75■■□□□ 1.23
CTSB-219ENST00000530640 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
CTSB-219ENST00000530640 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
CTSB-219ENST00000530640 PPLO60437 1756 aa22.72■■□□□ 1.23
CTSB-219ENST00000530640 SHPRHQ149N8 1683 aa22.71■■□□□ 1.23
CTSB-219ENST00000530640 LRRC59Q96AG4 307 aaKnown RBP22.71■■□□□ 1.23
CTSB-219ENST00000530640 METP08581 1390 aa22.69■■□□□ 1.22
CTSB-219ENST00000530640 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
CTSB-219ENST00000530640 VGFO15240 615 aaPredicted RBP22.69■■□□□ 1.22
CTSB-219ENST00000530640 LRP6O75581 1613 aa22.67■■□□□ 1.22
CTSB-219ENST00000530640 MST1RQ04912 1400 aa22.67■■□□□ 1.22
CTSB-219ENST00000530640 SETD1AO15047 1707 aaKnown RBP22.67■■□□□ 1.22
CTSB-219ENST00000530640 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
CTSB-219ENST00000530640 ASXL1Q8IXJ9 1541 aa22.65■■□□□ 1.22
CTSB-219ENST00000530640 RXRBP28702 533 aa22.64■■□□□ 1.22
CTSB-219ENST00000530640 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
CTSB-219ENST00000530640 IFT172Q9UG01 1749 aa22.63■■□□□ 1.21
CTSB-219ENST00000530640 CDK12Q9NYV4 1490 aaPredicted RBP22.61■■□□□ 1.21
CTSB-219ENST00000530640 PTCH1Q13635 1447 aa22.6■■□□□ 1.21
CTSB-219ENST00000530640 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
CTSB-219ENST00000530640 NUTM2BA6NNL0 878 aaPredicted RBP22.59■■□□□ 1.21
CTSB-219ENST00000530640 NUTM2EB1AL46 878 aaPredicted RBP22.59■■□□□ 1.21
CTSB-219ENST00000530640 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
CTSB-219ENST00000530640 PRAG1Q86YV5 1406 aa22.58■■□□□ 1.21
CTSB-219ENST00000530640 NHSL1Q5SYE7 1610 aa22.58■■□□□ 1.21
CTSB-219ENST00000530640 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
CTSB-219ENST00000530640 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
CTSB-219ENST00000530640 UPF1Q92900 1129 aaKnown RBP eCLIP22.56■■□□□ 1.25e-29■■■■■ 114
CTSB-219ENST00000530640 AFF2P51816 1311 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms