RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 MLLT3P42568 568 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-217ENST00000530253 ATAD2BQ9ULI0 1458 aa16.07■□□□□ 0.16
CCDC90B-217ENST00000530253 EYA1Q99502 592 aa16.06■□□□□ 0.16
CCDC90B-217ENST00000530253 RSF1Q96T23 1441 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-217ENST00000530253 Q6ZNB5 142 aa16.05■□□□□ 0.16
CCDC90B-217ENST00000530253 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
CCDC90B-217ENST00000530253 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
CCDC90B-217ENST00000530253 GGCXP38435 758 aa16.03■□□□□ 0.16
CCDC90B-217ENST00000530253 PTGDRQ13258 359 aa16.03■□□□□ 0.16
CCDC90B-217ENST00000530253 PPP1R18Q6NYC8 613 aa16.02■□□□□ 0.16
CCDC90B-217ENST00000530253 RBM46Q8TBY0 533 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-217ENST00000530253 DNAJB2P25686 324 aa16.01■□□□□ 0.15
CCDC90B-217ENST00000530253 EIF4ENIF1Q9NRA8 985 aaKnown RBP16■□□□□ 0.15
CCDC90B-217ENST00000530253 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
CCDC90B-217ENST00000530253 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
CCDC90B-217ENST00000530253 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
CCDC90B-217ENST00000530253 PRKD2Q9BZL6 878 aa15.99■□□□□ 0.15
CCDC90B-217ENST00000530253 WIZO95785 1651 aa15.98■□□□□ 0.15
CCDC90B-217ENST00000530253 NUTM2FA1L443 756 aa15.96■□□□□ 0.15
CCDC90B-217ENST00000530253 COPS2P61201 443 aa15.95■□□□□ 0.14
CCDC90B-217ENST00000530253 PCDHB3Q9Y5E6 796 aa15.94■□□□□ 0.14
CCDC90B-217ENST00000530253 GFRA3O60609 400 aa15.93■□□□□ 0.14
CCDC90B-217ENST00000530253 TMUB1Q9BVT8 246 aa15.93■□□□□ 0.14
CCDC90B-217ENST00000530253 ADGRG1Q9Y653 693 aa15.93■□□□□ 0.14
CCDC90B-217ENST00000530253 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-217ENST00000530253 FCHSD2O94868 740 aa15.92■□□□□ 0.14
CCDC90B-217ENST00000530253 TMEM134Q9H6X4 195 aa15.92■□□□□ 0.14
CCDC90B-217ENST00000530253 ZPR1O75312 459 aa15.91■□□□□ 0.14
CCDC90B-217ENST00000530253 KMT5BQ4FZB7 885 aa15.9■□□□□ 0.14
CCDC90B-217ENST00000530253 NKX2-3Q8TAU0 364 aa15.88■□□□□ 0.13
CCDC90B-217ENST00000530253 NRG2O14511 850 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-217ENST00000530253 RCCD1A6NED2 376 aa15.86■□□□□ 0.13
CCDC90B-217ENST00000530253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
CCDC90B-217ENST00000530253 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
CCDC90B-217ENST00000530253 SEMA3EO15041 775 aa15.83■□□□□ 0.12
CCDC90B-217ENST00000530253 OATP04181 439 aa15.83■□□□□ 0.12
CCDC90B-217ENST00000530253 SMYD5Q6GMV2 418 aa15.83■□□□□ 0.12
CCDC90B-217ENST00000530253 BLOC1S3Q6QNY0 202 aa15.82■□□□□ 0.12
CCDC90B-217ENST00000530253 ACTN4O43707 911 aaKnown RBP15.81■□□□□ 0.12
CCDC90B-217ENST00000530253 CFHP08603 1231 aa15.8■□□□□ 0.12
CCDC90B-217ENST00000530253 HIC1Q14526 733 aa15.8■□□□□ 0.12
CCDC90B-217ENST00000530253 TRAF7Q6Q0C0 670 aa15.8■□□□□ 0.12
CCDC90B-217ENST00000530253 RSPH4AQ5TD94 716 aa15.79■□□□□ 0.12
CCDC90B-217ENST00000530253 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
CCDC90B-217ENST00000530253 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
CCDC90B-217ENST00000530253 NR1I2O75469 434 aa15.74■□□□□ 0.11
CCDC90B-217ENST00000530253 PXYLP1Q8TE99 480 aa15.74■□□□□ 0.11
CCDC90B-217ENST00000530253 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
CCDC90B-217ENST00000530253 TESPA1A2RU30 521 aaPredicted RBP15.72■□□□□ 0.11
CCDC90B-217ENST00000530253 RNF223E7ERA6 249 aa15.72■□□□□ 0.11
CCDC90B-217ENST00000530253 TLL1O43897 1013 aa15.7■□□□□ 0.1
CCDC90B-217ENST00000530253 ANKLE1Q8NAG6 615 aa15.7■□□□□ 0.1
CCDC90B-217ENST00000530253 SLC19A1P41440 591 aa15.69■□□□□ 0.1
CCDC90B-217ENST00000530253 METTL3Q86U44 580 aaKnown RBP15.69■□□□□ 0.1
CCDC90B-217ENST00000530253 ADH1BP00325 375 aa15.68■□□□□ 0.1
CCDC90B-217ENST00000530253 SLC10A3P09131 477 aa15.68■□□□□ 0.1
CCDC90B-217ENST00000530253 SUPT5HO00267 1087 aaKnown RBP15.67■□□□□ 0.1
CCDC90B-217ENST00000530253 GNPATO15228 680 aa15.67■□□□□ 0.1
CCDC90B-217ENST00000530253 RBM26Q5T8P6 1007 aaKnown RBP15.65■□□□□ 0.1
CCDC90B-217ENST00000530253 LCE2BO14633 110 aa15.64■□□□□ 0.09
CCDC90B-217ENST00000530253 S1PR4O95977 384 aa15.64■□□□□ 0.09
CCDC90B-217ENST00000530253 CCDC88BA6NC98 1476 aa15.63■□□□□ 0.09
CCDC90B-217ENST00000530253 NESP48681 1621 aa15.61■□□□□ 0.09
CCDC90B-217ENST00000530253 SLC6A16Q9GZN6 736 aa15.61■□□□□ 0.09
CCDC90B-217ENST00000530253 SPRYD7Q5W111 196 aa15.6■□□□□ 0.09
CCDC90B-217ENST00000530253 ZNF598Q86UK7 904 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-217ENST00000530253 DAXXQ9UER7 740 aaPredicted RBP15.6■□□□□ 0.09
CCDC90B-217ENST00000530253 SCUBE3Q8IX30 993 aa15.57■□□□□ 0.08
CCDC90B-217ENST00000530253 RDH13Q8NBN7 331 aa15.57■□□□□ 0.08
CCDC90B-217ENST00000530253 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
CCDC90B-217ENST00000530253 PRR20EP86478 221 aa15.56■□□□□ 0.08
CCDC90B-217ENST00000530253 PRR20CP86479 221 aa15.56■□□□□ 0.08
CCDC90B-217ENST00000530253 PRR20DP86480 221 aa15.56■□□□□ 0.08
CCDC90B-217ENST00000530253 PRR20BP86481 221 aa15.56■□□□□ 0.08
CCDC90B-217ENST00000530253 PRR20AP86496 221 aa15.56■□□□□ 0.08
CCDC90B-217ENST00000530253 SULF1Q8IWU6 871 aa15.56■□□□□ 0.08
CCDC90B-217ENST00000530253 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
CCDC90B-217ENST00000530253 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
CCDC90B-217ENST00000530253 SPSB2Q99619 263 aa15.54■□□□□ 0.08
CCDC90B-217ENST00000530253 CFTRP13569 1480 aa15.53■□□□□ 0.08
CCDC90B-217ENST00000530253 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
CCDC90B-217ENST00000530253 GPR37O15354 613 aa15.53■□□□□ 0.08
CCDC90B-217ENST00000530253 ZNF697Q5TEC3 545 aa15.53■□□□□ 0.08
CCDC90B-217ENST00000530253 EMID1Q96A84 441 aaPredicted RBP15.53■□□□□ 0.08
CCDC90B-217ENST00000530253 PKDCCQ504Y2 493 aa15.52■□□□□ 0.08
CCDC90B-217ENST00000530253 TRIM67Q6ZTA4 783 aa15.52■□□□□ 0.08
CCDC90B-217ENST00000530253 FECHP22830 423 aa15.51■□□□□ 0.07
CCDC90B-217ENST00000530253 PUS10Q3MIT2 529 aaKnown RBP15.51■□□□□ 0.07
CCDC90B-217ENST00000530253 GPIHBP1Q8IV16 184 aa15.51■□□□□ 0.07
CCDC90B-217ENST00000530253 DDX11L8A8MPP1 907 aa15.5■□□□□ 0.07
CCDC90B-217ENST00000530253 DGAT1O75907 488 aa15.5■□□□□ 0.07
CCDC90B-217ENST00000530253 LIAT1Q6ZQX7 453 aa15.5■□□□□ 0.07
CCDC90B-217ENST00000530253 ATP6V1AP38606 617 aa15.48■□□□□ 0.07
CCDC90B-217ENST00000530253 ZNF787Q6DD87 383 aa15.48■□□□□ 0.07
CCDC90B-217ENST00000530253 HAP1P54257 671 aaPredicted RBP15.47■□□□□ 0.07
CCDC90B-217ENST00000530253 MORN1Q5T089 497 aa15.46■□□□□ 0.07
CCDC90B-217ENST00000530253 TULP1O00294 542 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-217ENST00000530253 FUT2Q10981 343 aa15.45■□□□□ 0.06
CCDC90B-217ENST00000530253 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
CCDC90B-217ENST00000530253 GRIPAP1Q4V328 841 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms