RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 PLEKHG1Q9ULL1 1385 aa28.28■■■□□ 2.12
PCNX3-203ENST00000530174 HDGFP51858 240 aaKnown RBP28.28■■■□□ 2.12
PCNX3-203ENST00000530174 PPP1R15AO75807 674 aaPredicted RBP28.27■■■□□ 2.12
PCNX3-203ENST00000530174 BCANQ96GW7 911 aa28.26■■■□□ 2.11
PCNX3-203ENST00000530174 SENP3Q9H4L4 574 aaPredicted RBP28.26■■■□□ 2.11
PCNX3-203ENST00000530174 TRPM2O94759 1503 aa28.25■■■□□ 2.11
PCNX3-203ENST00000530174 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.25■■■□□ 2.11
PCNX3-203ENST00000530174 CLTCL1P53675 1640 aa28.23■■■□□ 2.11
PCNX3-203ENST00000530174 TOM1O60784 492 aa28.23■■■□□ 2.11
PCNX3-203ENST00000530174 NUTM2DQ5VT03 806 aaPredicted RBP28.23■■■□□ 2.11
PCNX3-203ENST00000530174 SLC4A1APQ9BWU0 796 aaKnown RBP28.22■■■□□ 2.11
PCNX3-203ENST00000530174 KCNA6P17658 529 aa28.2■■■□□ 2.1
PCNX3-203ENST00000530174 ALKQ9UM73 1620 aa28.2■■■□□ 2.1
PCNX3-203ENST00000530174 PIP4K2BP78356 416 aa28.18■■■□□ 2.1
PCNX3-203ENST00000530174 NWD1Q149M9 1564 aa28.18■■■□□ 2.1
PCNX3-203ENST00000530174 XIRP1Q702N8 1843 aaKnown RBP28.18■■■□□ 2.1
PCNX3-203ENST00000530174 SCAF1Q9H7N4 1312 aaKnown RBP28.18■■■□□ 2.1
PCNX3-203ENST00000530174 ADAMTS13Q76LX8 1427 aa28.15■■■□□ 2.1
PCNX3-203ENST00000530174 ZNF326Q5BKZ1 582 aaKnown RBP28.14■■■□□ 2.1
PCNX3-203ENST00000530174 NKTRP30414 1462 aaKnown RBP28.14■■■□□ 2.09
PCNX3-203ENST00000530174 TBX22Q9Y458 520 aa28.13■■■□□ 2.09
PCNX3-203ENST00000530174 KIF1BO60333 1816 aa28.13■■■□□ 2.09
PCNX3-203ENST00000530174 TMEM94Q12767 1356 aa28.12■■■□□ 2.09
PCNX3-203ENST00000530174 DIP2AQ14689 1571 aa28.12■■■□□ 2.09
PCNX3-203ENST00000530174 CHD2O14647 1828 aaKnown RBP28.11■■■□□ 2.09
PCNX3-203ENST00000530174 SETD5Q9C0A6 1442 aa28.11■■■□□ 2.09
PCNX3-203ENST00000530174 FOXD1Q16676 465 aa28.1■■■□□ 2.09
PCNX3-203ENST00000530174 PROSER2Q86WR7 435 aaPredicted RBP28.1■■■□□ 2.09
PCNX3-203ENST00000530174 NEXMIFQ5QGS0 1516 aa28.08■■■□□ 2.09
PCNX3-203ENST00000530174 RBM33Q96EV2 1170 aaKnown RBP28.07■■■□□ 2.08
PCNX3-203ENST00000530174 MPHOSPH9Q99550 1183 aa28.07■■■□□ 2.08
PCNX3-203ENST00000530174 SETBP1Q9Y6X0 1596 aa28.06■■■□□ 2.08
PCNX3-203ENST00000530174 NRXN3Q9Y4C0 1643 aa28.06■■■□□ 2.08
PCNX3-203ENST00000530174 HSPA1LP34931 641 aa28.05■■■□□ 2.08
PCNX3-203ENST00000530174 PIK3R4Q99570 1358 aa28.04■■■□□ 2.08
PCNX3-203ENST00000530174 ACIN1Q9UKV3 1341 aaKnown RBP28.02■■■□□ 2.08
PCNX3-203ENST00000530174 RAB3GAP2Q9H2M9 1393 aa28.01■■■□□ 2.07
PCNX3-203ENST00000530174 CCDC144AA2RUR9 1427 aa27.99■■■□□ 2.07
PCNX3-203ENST00000530174 PTPRUQ92729 1446 aa27.99■■■□□ 2.07
PCNX3-203ENST00000530174 MSH6P52701 1360 aa27.96■■■□□ 2.07
PCNX3-203ENST00000530174 AMOTL2Q9Y2J4 779 aa27.95■■■□□ 2.06
PCNX3-203ENST00000530174 RPGRIP1LQ68CZ1 1315 aa27.94■■■□□ 2.06
PCNX3-203ENST00000530174 METP08581 1390 aa27.94■■■□□ 2.06
PCNX3-203ENST00000530174 VGFO15240 615 aaPredicted RBP27.93■■■□□ 2.06
PCNX3-203ENST00000530174 PPLO60437 1756 aa27.93■■■□□ 2.06
PCNX3-203ENST00000530174 NCOA3Q9Y6Q9 1424 aa27.92■■■□□ 2.06
PCNX3-203ENST00000530174 XRN1Q8IZH2 1706 aaKnown RBP27.92■■■□□ 2.06
PCNX3-203ENST00000530174 DISP3Q9P2K9 1392 aa27.91■■■□□ 2.06
PCNX3-203ENST00000530174 FAM135BQ49AJ0 1406 aa27.9■■■□□ 2.06
PCNX3-203ENST00000530174 SPATA31E1Q6ZUB1 1445 aa27.9■■■□□ 2.06
PCNX3-203ENST00000530174 C14orf37Q86TY3 774 aa27.88■■■□□ 2.05
PCNX3-203ENST00000530174 RGL3Q3MIN7 710 aa27.86■■■□□ 2.05
PCNX3-203ENST00000530174 SETD1AO15047 1707 aaKnown RBP27.86■■■□□ 2.05
PCNX3-203ENST00000530174 ROBO1Q9Y6N7 1651 aa27.85■■■□□ 2.05
PCNX3-203ENST00000530174 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.83■■■□□ 2.05
PCNX3-203ENST00000530174 IFT172Q9UG01 1749 aa27.82■■■□□ 2.04
PCNX3-203ENST00000530174 C19orf44Q9H6X5 657 aa27.82■■■□□ 2.04
PCNX3-203ENST00000530174 SLAIN2Q9P270 581 aa27.82■■■□□ 2.04
PCNX3-203ENST00000530174 HRCP23327 699 aa27.81■■■□□ 2.04
PCNX3-203ENST00000530174 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
PCNX3-203ENST00000530174 ADGRF5Q8IZF2 1346 aa27.79■■■□□ 2.04
PCNX3-203ENST00000530174 MED1Q15648 1581 aaPredicted RBP27.77■■■□□ 2.04
PCNX3-203ENST00000530174 ATF3P18847 181 aa27.77■■■□□ 2.04
PCNX3-203ENST00000530174 CADPS2Q86UW7 1296 aa27.77■■■□□ 2.04
PCNX3-203ENST00000530174 DCCP43146 1447 aa27.75■■■□□ 2.03
PCNX3-203ENST00000530174 PTCH1Q13635 1447 aa27.74■■■□□ 2.03
PCNX3-203ENST00000530174 PRAG1Q86YV5 1406 aa27.72■■■□□ 2.03
PCNX3-203ENST00000530174 ADGRL3Q9HAR2 1447 aa27.72■■■□□ 2.03
PCNX3-203ENST00000530174 ROBO2Q9HCK4 1378 aa27.72■■■□□ 2.03
PCNX3-203ENST00000530174 PIK3C2GO75747 1445 aa27.71■■■□□ 2.03
PCNX3-203ENST00000530174 NALCNQ8IZF0 1738 aa27.7■■■□□ 2.03
PCNX3-203ENST00000530174 PHLPP1O60346 1717 aa27.68■■■□□ 2.02
PCNX3-203ENST00000530174 ILDR2Q71H61 639 aa27.68■■■□□ 2.02
PCNX3-203ENST00000530174 MYOM2P54296 1465 aa27.66■■■□□ 2.02
PCNX3-203ENST00000530174 MST1RQ04912 1400 aa27.66■■■□□ 2.02
PCNX3-203ENST00000530174 ASXL1Q8IXJ9 1541 aa27.65■■■□□ 2.02
PCNX3-203ENST00000530174 NRXN1Q9ULB1 1477 aa27.64■■■□□ 2.02
PCNX3-203ENST00000530174 BRINP3Q76B58 766 aa27.62■■■□□ 2.01
PCNX3-203ENST00000530174 COL16A1Q07092 1604 aaPredicted RBP27.61■■■□□ 2.01
PCNX3-203ENST00000530174 AHDC1Q5TGY3 1603 aaPredicted RBP27.61■■■□□ 2.01
PCNX3-203ENST00000530174 LRPPRCP42704 1394 aaKnown RBP27.6■■■□□ 2.01
PCNX3-203ENST00000530174 TMEM132EQ6IEE7 984 aa27.6■■■□□ 2.01
PCNX3-203ENST00000530174 STK26Q9P289 416 aa27.6■■■□□ 2.01
PCNX3-203ENST00000530174 TECPR2O15040 1411 aa27.59■■■□□ 2.01
PCNX3-203ENST00000530174 C14orf93Q9H972 538 aaKnown RBP27.58■■■□□ 2.01
PCNX3-203ENST00000530174 LAMC1P11047 1609 aa27.57■■■□□ 2
PCNX3-203ENST00000530174 KNDC1Q76NI1 1749 aa27.57■■■□□ 2
PCNX3-203ENST00000530174 PHF23Q9BUL5 403 aaPredicted RBP27.56■■■□□ 2
PCNX3-203ENST00000530174 ABCC11Q96J66 1382 aa27.56■■■□□ 2
PCNX3-203ENST00000530174 JCADQ9P266 1359 aa27.56■■■□□ 2
PCNX3-203ENST00000530174 YTHDC2Q9H6S0 1430 aaKnown RBP27.56■■■□□ 2
PCNX3-203ENST00000530174 CFAP70Q5T0N1 1121 aa27.55■■■□□ 2
PCNX3-203ENST00000530174 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
PCNX3-203ENST00000530174 WAPLQ7Z5K2 1190 aa27.52■■■□□ 2
PCNX3-203ENST00000530174 NHSL1Q5SYE7 1610 aa27.51■■□□□ 1.99
PCNX3-203ENST00000530174 CDC42BPGQ6DT37 1551 aa27.51■■□□□ 1.99
PCNX3-203ENST00000530174 PLEKHH1Q9ULM0 1364 aa27.5■■□□□ 1.99
PCNX3-203ENST00000530174 DCAF11Q8TEB1 546 aa27.5■■□□□ 1.99
PCNX3-203ENST00000530174 KDM2AQ9Y2K7 1162 aa27.5■■□□□ 1.99
PCNX3-203ENST00000530174 DHX57Q6P158 1386 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms