RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 ALKQ9UM73 1620 aa18.25■□□□□ 0.51
COPB1-206ENST00000529210 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
COPB1-206ENST00000529210 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
COPB1-206ENST00000529210 TOM1O60784 492 aa18.24■□□□□ 0.51
COPB1-206ENST00000529210 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
COPB1-206ENST00000529210 XIRP1Q702N8 1843 aaKnown RBP18.22■□□□□ 0.51
COPB1-206ENST00000529210 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
COPB1-206ENST00000529210 TRPM2O94759 1503 aa18.22■□□□□ 0.51
COPB1-206ENST00000529210 KCNA6P17658 529 aa18.21■□□□□ 0.51
COPB1-206ENST00000529210 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
COPB1-206ENST00000529210 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
COPB1-206ENST00000529210 CHD2O14647 1828 aaKnown RBP18.18■□□□□ 0.5
COPB1-206ENST00000529210 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
COPB1-206ENST00000529210 TBX22Q9Y458 520 aa18.17■□□□□ 0.5
COPB1-206ENST00000529210 CLTCL1P53675 1640 aa18.16■□□□□ 0.5
COPB1-206ENST00000529210 ADAMTS13Q76LX8 1427 aa18.16■□□□□ 0.5
COPB1-206ENST00000529210 PIK3R4Q99570 1358 aa18.16■□□□□ 0.5
COPB1-206ENST00000529210 PPP1R15AO75807 674 aaPredicted RBP18.15■□□□□ 0.5
COPB1-206ENST00000529210 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
COPB1-206ENST00000529210 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
COPB1-206ENST00000529210 TMEM94Q12767 1356 aa18.13■□□□□ 0.49
COPB1-206ENST00000529210 SETBP1Q9Y6X0 1596 aa18.13■□□□□ 0.49
COPB1-206ENST00000529210 KIF1BO60333 1816 aa18.12■□□□□ 0.49
COPB1-206ENST00000529210 NCOA3Q9Y6Q9 1424 aa18.12■□□□□ 0.49
COPB1-206ENST00000529210 NEXMIFQ5QGS0 1516 aa18.11■□□□□ 0.49
COPB1-206ENST00000529210 NRXN3Q9Y4C0 1643 aa18.11■□□□□ 0.49
COPB1-206ENST00000529210 TRIM52Q96A61 297 aa18.1■□□□□ 0.49
COPB1-206ENST00000529210 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
COPB1-206ENST00000529210 PIP4K2BP78356 416 aa18.09■□□□□ 0.49
COPB1-206ENST00000529210 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.48
COPB1-206ENST00000529210 BCANQ96GW7 911 aa18.08■□□□□ 0.48
COPB1-206ENST00000529210 HSPA1LP34931 641 aa18.07■□□□□ 0.48
COPB1-206ENST00000529210 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
COPB1-206ENST00000529210 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
COPB1-206ENST00000529210 SETD5Q9C0A6 1442 aa18.05■□□□□ 0.48
COPB1-206ENST00000529210 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
COPB1-206ENST00000529210 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
COPB1-206ENST00000529210 RPGRIP1LQ68CZ1 1315 aa18.03■□□□□ 0.48
COPB1-206ENST00000529210 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
COPB1-206ENST00000529210 PTPRUQ92729 1446 aa18.03■□□□□ 0.48
COPB1-206ENST00000529210 MSH6P52701 1360 aa18.03■□□□□ 0.48
COPB1-206ENST00000529210 DISP3Q9P2K9 1392 aa18.02■□□□□ 0.47
COPB1-206ENST00000529210 MPHOSPH9Q99550 1183 aa18.01■□□□□ 0.47
COPB1-206ENST00000529210 PPLO60437 1756 aa18.01■□□□□ 0.47
COPB1-206ENST00000529210 SETD1AO15047 1707 aaKnown RBP18■□□□□ 0.47
COPB1-206ENST00000529210 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
COPB1-206ENST00000529210 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
COPB1-206ENST00000529210 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
COPB1-206ENST00000529210 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
COPB1-206ENST00000529210 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
COPB1-206ENST00000529210 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
COPB1-206ENST00000529210 METP08581 1390 aa17.97■□□□□ 0.47
COPB1-206ENST00000529210 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
COPB1-206ENST00000529210 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
COPB1-206ENST00000529210 DCCP43146 1447 aa17.97■□□□□ 0.47
COPB1-206ENST00000529210 MED1Q15648 1581 aaPredicted RBP17.96■□□□□ 0.47
COPB1-206ENST00000529210 RAB3GAP2Q9H2M9 1393 aa17.96■□□□□ 0.47
COPB1-206ENST00000529210 HRCP23327 699 aa17.95■□□□□ 0.46
COPB1-206ENST00000529210 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
COPB1-206ENST00000529210 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
COPB1-206ENST00000529210 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
COPB1-206ENST00000529210 PTCH1Q13635 1447 aa17.93■□□□□ 0.46
COPB1-206ENST00000529210 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
COPB1-206ENST00000529210 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
COPB1-206ENST00000529210 ADGRL3Q9HAR2 1447 aa17.89■□□□□ 0.45
COPB1-206ENST00000529210 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
COPB1-206ENST00000529210 AHDC1Q5TGY3 1603 aaPredicted RBP17.87■□□□□ 0.45
COPB1-206ENST00000529210 ATF3P18847 181 aa17.87■□□□□ 0.45
COPB1-206ENST00000529210 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
COPB1-206ENST00000529210 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
COPB1-206ENST00000529210 COL16A1Q07092 1604 aaPredicted RBP17.86■□□□□ 0.45
COPB1-206ENST00000529210 PHLPP1O60346 1717 aa17.86■□□□□ 0.45
COPB1-206ENST00000529210 PIK3C2GO75747 1445 aa17.85■□□□□ 0.45
COPB1-206ENST00000529210 ADGRF5Q8IZF2 1346 aa17.85■□□□□ 0.45
COPB1-206ENST00000529210 NRXN1Q9ULB1 1477 aa17.85■□□□□ 0.45
COPB1-206ENST00000529210 MYOM2P54296 1465 aa17.84■□□□□ 0.45
COPB1-206ENST00000529210 TECPR2O15040 1411 aa17.84■□□□□ 0.45
COPB1-206ENST00000529210 MST1RQ04912 1400 aa17.84■□□□□ 0.45
COPB1-206ENST00000529210 ROBO2Q9HCK4 1378 aa17.83■□□□□ 0.45
COPB1-206ENST00000529210 RGL3Q3MIN7 710 aa17.82■□□□□ 0.44
COPB1-206ENST00000529210 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
COPB1-206ENST00000529210 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
COPB1-206ENST00000529210 JCADQ9P266 1359 aa17.8■□□□□ 0.44
COPB1-206ENST00000529210 BRINP3Q76B58 766 aa17.8■□□□□ 0.44
COPB1-206ENST00000529210 LAMC1P11047 1609 aa17.8■□□□□ 0.44
COPB1-206ENST00000529210 NHSL1Q5SYE7 1610 aa17.8■□□□□ 0.44
COPB1-206ENST00000529210 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
COPB1-206ENST00000529210 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
COPB1-206ENST00000529210 SOCS7O14512 581 aa17.78■□□□□ 0.44
COPB1-206ENST00000529210 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
COPB1-206ENST00000529210 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
COPB1-206ENST00000529210 C14orf93Q9H972 538 aaKnown RBP17.76■□□□□ 0.43
COPB1-206ENST00000529210 C1orf167Q5SNV9 1468 aa17.75■□□□□ 0.43
COPB1-206ENST00000529210 SIRT1Q96EB6 747 aa17.75■□□□□ 0.43
COPB1-206ENST00000529210 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
COPB1-206ENST00000529210 YTHDC2Q9H6S0 1430 aaKnown RBP17.74■□□□□ 0.43
COPB1-206ENST00000529210 SPATA31A6Q5VVP1 1343 aa17.73■□□□□ 0.43
COPB1-206ENST00000529210 RGS17Q9UGC6 210 aaPredicted RBP17.72■□□□□ 0.43
COPB1-206ENST00000529210 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
COPB1-206ENST00000529210 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms