RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 SYNMO15061 1565 aa24.92■■□□□ 1.58
TM9SF1-206ENST00000528669 ATP7AQ04656 1500 aa24.92■■□□□ 1.58
TM9SF1-206ENST00000528669 ARAP3Q8WWN8 1544 aa24.92■■□□□ 1.58
TM9SF1-206ENST00000528669 KANK1Q14678 1352 aa24.91■■□□□ 1.58
TM9SF1-206ENST00000528669 TCERG1O14776 1098 aaKnown RBP24.91■■□□□ 1.58
TM9SF1-206ENST00000528669 FANCAO15360 1455 aa24.91■■□□□ 1.58
TM9SF1-206ENST00000528669 PLEKHH1Q9ULM0 1364 aa24.9■■□□□ 1.58
TM9SF1-206ENST00000528669 NBR1Q14596 966 aa24.9■■□□□ 1.58
TM9SF1-206ENST00000528669 BCL11AQ9H165 835 aa24.89■■□□□ 1.58
TM9SF1-206ENST00000528669 STAC3Q96MF2 364 aa24.88■■□□□ 1.57
TM9SF1-206ENST00000528669 NPM2Q86SE8 214 aaKnown RBP24.88■■□□□ 1.57
TM9SF1-206ENST00000528669 INO80Q9ULG1 1556 aaPredicted RBP24.88■■□□□ 1.57
TM9SF1-206ENST00000528669 ASXL1Q8IXJ9 1541 aa24.88■■□□□ 1.57
TM9SF1-206ENST00000528669 C20orf194Q5TEA3 1177 aa24.87■■□□□ 1.57
TM9SF1-206ENST00000528669 UGGT1Q9NYU2 1555 aa24.87■■□□□ 1.57
TM9SF1-206ENST00000528669 MYOM1P52179 1685 aa24.87■■□□□ 1.57
TM9SF1-206ENST00000528669 CFAP70Q5T0N1 1121 aa24.87■■□□□ 1.57
TM9SF1-206ENST00000528669 ZBTB47Q9UFB7 747 aaPredicted RBP24.86■■□□□ 1.57
TM9SF1-206ENST00000528669 PDE4AP27815 886 aa24.86■■□□□ 1.57
TM9SF1-206ENST00000528669 SKAP1Q86WV1 359 aa24.86■■□□□ 1.57
TM9SF1-206ENST00000528669 VWDEQ8N2E2 1590 aa24.85■■□□□ 1.57
TM9SF1-206ENST00000528669 ABCA9Q8IUA7 1624 aa24.85■■□□□ 1.57
TM9SF1-206ENST00000528669 EIF3AQ14152 1382 aaKnown RBP24.85■■□□□ 1.57
TM9SF1-206ENST00000528669 ADGRL1O94910 1474 aa24.83■■□□□ 1.57
TM9SF1-206ENST00000528669 DUSP27Q5VZP5 1158 aa24.83■■□□□ 1.57
TM9SF1-206ENST00000528669 ADGRF5Q8IZF2 1346 aa24.83■■□□□ 1.57
TM9SF1-206ENST00000528669 CCDC146Q8IYE0 955 aa24.82■■□□□ 1.56
TM9SF1-206ENST00000528669 KDM5AP29375 1690 aaKnown RBP24.81■■□□□ 1.56
TM9SF1-206ENST00000528669 KIAA1210Q9ULL0 1709 aa24.8■■□□□ 1.56
TM9SF1-206ENST00000528669 BACH2Q9BYV9 841 aa24.8■■□□□ 1.56
TM9SF1-206ENST00000528669 MROH1Q8NDA8 1641 aa24.8■■□□□ 1.56
TM9SF1-206ENST00000528669 PIK3C2GO75747 1445 aa24.8■■□□□ 1.56
TM9SF1-206ENST00000528669 ZNF521Q96K83 1311 aa24.8■■□□□ 1.56
TM9SF1-206ENST00000528669 GOLGA2Q08379 1002 aa24.8■■□□□ 1.56
TM9SF1-206ENST00000528669 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
TM9SF1-206ENST00000528669 MAP3K4Q9Y6R4 1608 aa24.78■■□□□ 1.56
TM9SF1-206ENST00000528669 MS4A1P11836 297 aa24.78■■□□□ 1.56
TM9SF1-206ENST00000528669 ERVK-7P63135 1459 aa24.76■■□□□ 1.55
TM9SF1-206ENST00000528669 KIF1BO60333 1816 aa24.76■■□□□ 1.55
TM9SF1-206ENST00000528669 NPC1L1Q9UHC9 1359 aa24.76■■□□□ 1.55
TM9SF1-206ENST00000528669 DEKP35659 375 aaKnown RBP24.75■■□□□ 1.55
TM9SF1-206ENST00000528669 CARD14Q9BXL6 1004 aa24.74■■□□□ 1.55
TM9SF1-206ENST00000528669 MYOM2P54296 1465 aa24.74■■□□□ 1.55
TM9SF1-206ENST00000528669 MROH2AA6NES4 1674 aa24.73■■□□□ 1.55
TM9SF1-206ENST00000528669 APAF1O14727 1248 aa24.73■■□□□ 1.55
TM9SF1-206ENST00000528669 SLFN5Q08AF3 891 aa24.73■■□□□ 1.55
TM9SF1-206ENST00000528669 NEURL4Q96JN8 1562 aa24.72■■□□□ 1.55
TM9SF1-206ENST00000528669 EFCAB6Q5THR3 1501 aa24.72■■□□□ 1.55
TM9SF1-206ENST00000528669 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
TM9SF1-206ENST00000528669 ASXL2Q76L83 1435 aa24.71■■□□□ 1.55
TM9SF1-206ENST00000528669 SPINK5Q9NQ38 1064 aaPredicted RBP24.71■■□□□ 1.55
TM9SF1-206ENST00000528669 PPRC1Q5VV67 1664 aaKnown RBP24.71■■□□□ 1.55
TM9SF1-206ENST00000528669 KIDINS220Q9ULH0 1771 aa24.7■■□□□ 1.54
TM9SF1-206ENST00000528669 IFT172Q9UG01 1749 aa24.69■■□□□ 1.54
TM9SF1-206ENST00000528669 KDM2BQ8NHM5 1336 aa24.68■■□□□ 1.54
TM9SF1-206ENST00000528669 CFAP65Q6ZU64 1925 aaKnown RBP24.68■■□□□ 1.54
TM9SF1-206ENST00000528669 NOS1P29475 1434 aa24.66■■□□□ 1.54
TM9SF1-206ENST00000528669 SLC24A1O60721 1099 aa24.65■■□□□ 1.54
TM9SF1-206ENST00000528669 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.65■■□□□ 1.54
TM9SF1-206ENST00000528669 TRMT2AQ8IZ69 625 aaKnown RBP24.65■■□□□ 1.54
TM9SF1-206ENST00000528669 TRAK1Q9UPV9 953 aa24.63■■□□□ 1.53
TM9SF1-206ENST00000528669 CENPQQ7L2Z9 268 aaPredicted RBP24.63■■□□□ 1.53
TM9SF1-206ENST00000528669 DMRT2Q9Y5R5 561 aa24.63■■□□□ 1.53
TM9SF1-206ENST00000528669 NRXN1Q9ULB1 1477 aa24.62■■□□□ 1.53
TM9SF1-206ENST00000528669 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
TM9SF1-206ENST00000528669 BCAR3O75815 825 aa24.61■■□□□ 1.53
TM9SF1-206ENST00000528669 RTL5Q5HYW3 569 aaPredicted RBP24.61■■□□□ 1.53
TM9SF1-206ENST00000528669 NKTRP30414 1462 aaKnown RBP24.61■■□□□ 1.53
TM9SF1-206ENST00000528669 GGT6Q6P531 493 aa24.6■■□□□ 1.53
TM9SF1-206ENST00000528669 ZNF518AQ6AHZ1 1483 aa24.6■■□□□ 1.53
TM9SF1-206ENST00000528669 LAS1LQ9Y4W2 734 aaKnown RBP24.6■■□□□ 1.53
TM9SF1-206ENST00000528669 MYO3AQ8NEV4 1616 aa24.6■■□□□ 1.53
TM9SF1-206ENST00000528669 TNNT2P45379 298 aaPredicted RBP24.59■■□□□ 1.53
TM9SF1-206ENST00000528669 ADGRB3O60242 1522 aa24.59■■□□□ 1.53
TM9SF1-206ENST00000528669 LMTK2Q8IWU2 1503 aa24.59■■□□□ 1.53
TM9SF1-206ENST00000528669 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.53
TM9SF1-206ENST00000528669 E9PSI1 815 aa24.57■■□□□ 1.52
TM9SF1-206ENST00000528669 SLC12A5Q9H2X9 1139 aa24.57■■□□□ 1.52
TM9SF1-206ENST00000528669 SBNO2Q9Y2G9 1366 aa24.57■■□□□ 1.52
TM9SF1-206ENST00000528669 NSD3Q9BZ95 1437 aa24.57■■□□□ 1.52
TM9SF1-206ENST00000528669 NPATQ14207 1427 aa24.56■■□□□ 1.52
TM9SF1-206ENST00000528669 MORC1Q86VD1 984 aa24.54■■□□□ 1.52
TM9SF1-206ENST00000528669 SETBP1Q9Y6X0 1596 aa24.53■■□□□ 1.52
TM9SF1-206ENST00000528669 POLR3AO14802 1390 aaPredicted RBP24.53■■□□□ 1.52
TM9SF1-206ENST00000528669 C14orf93Q9H972 538 aaKnown RBP24.53■■□□□ 1.52
TM9SF1-206ENST00000528669 PPLO60437 1756 aa24.53■■□□□ 1.52
TM9SF1-206ENST00000528669 QRICH2Q9H0J4 1663 aa24.52■■□□□ 1.52
TM9SF1-206ENST00000528669 NPM1P06748 294 aaKnown RBP eCLIP24.51■■□□□ 1.51
TM9SF1-206ENST00000528669 RGS3P49796 1198 aa24.51■■□□□ 1.51
TM9SF1-206ENST00000528669 NEUROD2Q15784 382 aa24.51■■□□□ 1.51
TM9SF1-206ENST00000528669 NUTM2DQ5VT03 806 aaPredicted RBP24.51■■□□□ 1.51
TM9SF1-206ENST00000528669 FRMPD1Q5SYB0 1578 aa24.51■■□□□ 1.51
TM9SF1-206ENST00000528669 WWC1Q8IX03 1113 aa24.51■■□□□ 1.51
TM9SF1-206ENST00000528669 RRP7AQ9Y3A4 280 aaKnown RBP24.5■■□□□ 1.51
TM9SF1-206ENST00000528669 ZC3H13Q5T200 1668 aaKnown RBP24.49■■□□□ 1.51
TM9SF1-206ENST00000528669 CD109Q6YHK3 1445 aa24.49■■□□□ 1.51
TM9SF1-206ENST00000528669 POGZQ7Z3K3 1410 aa24.49■■□□□ 1.51
TM9SF1-206ENST00000528669 ADGRB1O14514 1584 aa24.48■■□□□ 1.51
TM9SF1-206ENST00000528669 C8orf34Q49A92 452 aa24.47■■□□□ 1.51
TM9SF1-206ENST00000528669 SHPRHQ149N8 1683 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms