RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 PIP4K2BP78356 416 aa34.92■■■■□ 3.18
PKP3-206ENST00000528036 NAIPQ13075 1403 aa34.91■■■■□ 3.18
PKP3-206ENST00000528036 SLC26A8Q96RN1 970 aa34.9■■■■□ 3.18
PKP3-206ENST00000528036 TMEM131LA2VDJ0 1609 aa34.9■■■■□ 3.18
PKP3-206ENST00000528036 STRCP1A6NGW2 1772 aa34.88■■■■□ 3.17
PKP3-206ENST00000528036 HFM1A2PYH4 1435 aa34.87■■■■□ 3.17
PKP3-206ENST00000528036 TBX22Q9Y458 520 aa34.84■■■■□ 3.17
PKP3-206ENST00000528036 DISP3Q9P2K9 1392 aa34.84■■■■□ 3.17
PKP3-206ENST00000528036 PROSER2Q86WR7 435 aaPredicted RBP34.8■■■■□ 3.16
PKP3-206ENST00000528036 NKTRP30414 1462 aaKnown RBP34.79■■■■□ 3.16
PKP3-206ENST00000528036 HSPA1LP34931 641 aa34.79■■■■□ 3.16
PKP3-206ENST00000528036 TMEM94Q12767 1356 aa34.76■■■■□ 3.16
PKP3-206ENST00000528036 TRIM52Q96A61 297 aa34.76■■■■□ 3.16
PKP3-206ENST00000528036 ACIN1Q9UKV3 1341 aaKnown RBP34.74■■■■□ 3.15
PKP3-206ENST00000528036 PIK3R4Q99570 1358 aa34.74■■■■□ 3.15
PKP3-206ENST00000528036 NWD1Q149M9 1564 aa34.73■■■■□ 3.15
PKP3-206ENST00000528036 ALKQ9UM73 1620 aa34.73■■■■□ 3.15
PKP3-206ENST00000528036 MYO5BQ9ULV0 1848 aa34.72■■■■□ 3.15
PKP3-206ENST00000528036 SPHKAPQ2M3C7 1700 aa34.71■■■■□ 3.15
PKP3-206ENST00000528036 DIP2AQ14689 1571 aa34.7■■■■□ 3.14
PKP3-206ENST00000528036 NCOA3Q9Y6Q9 1424 aa34.67■■■■□ 3.14
PKP3-206ENST00000528036 ZNF326Q5BKZ1 582 aaKnown RBP34.67■■■■□ 3.14
PKP3-206ENST00000528036 SLC4A1APQ9BWU0 796 aaKnown RBP34.67■■■■□ 3.14
PKP3-206ENST00000528036 TRPM2O94759 1503 aa34.66■■■■□ 3.14
PKP3-206ENST00000528036 ADAMTS13Q76LX8 1427 aa34.65■■■■□ 3.14
PKP3-206ENST00000528036 MSH6P52701 1360 aa34.64■■■■□ 3.14
PKP3-206ENST00000528036 NUTM2DQ5VT03 806 aaPredicted RBP34.64■■■■□ 3.14
PKP3-206ENST00000528036 FAM135BQ49AJ0 1406 aa34.64■■■■□ 3.14
PKP3-206ENST00000528036 XIRP1Q702N8 1843 aaKnown RBP34.6■■■■□ 3.13
PKP3-206ENST00000528036 CHD2O14647 1828 aaKnown RBP34.6■■■■□ 3.13
PKP3-206ENST00000528036 SENP3Q9H4L4 574 aaPredicted RBP34.59■■■■□ 3.13
PKP3-206ENST00000528036 RPGRIP1LQ68CZ1 1315 aa34.55■■■■□ 3.12
PKP3-206ENST00000528036 SETBP1Q9Y6X0 1596 aa34.53■■■■□ 3.12
PKP3-206ENST00000528036 CLTCL1P53675 1640 aa34.52■■■■□ 3.12
PKP3-206ENST00000528036 VGFO15240 615 aaPredicted RBP34.52■■■■□ 3.12
PKP3-206ENST00000528036 RBM33Q96EV2 1170 aaKnown RBP34.52■■■■□ 3.12
PKP3-206ENST00000528036 AMOTL2Q9Y2J4 779 aa34.52■■■■□ 3.12
PKP3-206ENST00000528036 C14orf37Q86TY3 774 aa34.5■■■■□ 3.11
PKP3-206ENST00000528036 SLAIN2Q9P270 581 aa34.5■■■■□ 3.11
PKP3-206ENST00000528036 C19orf44Q9H6X5 657 aa34.49■■■■□ 3.11
PKP3-206ENST00000528036 CADPS2Q86UW7 1296 aa34.48■■■■□ 3.11
PKP3-206ENST00000528036 KIF1BO60333 1816 aa34.47■■■■□ 3.11
PKP3-206ENST00000528036 ILDR2Q71H61 639 aa34.45■■■■□ 3.11
PKP3-206ENST00000528036 NEXMIFQ5QGS0 1516 aa34.45■■■■□ 3.1
PKP3-206ENST00000528036 MPHOSPH9Q99550 1183 aa34.44■■■■□ 3.1
PKP3-206ENST00000528036 ATF3P18847 181 aa34.43■■■■□ 3.1
PKP3-206ENST00000528036 MED1Q15648 1581 aaPredicted RBP34.42■■■■□ 3.1
PKP3-206ENST00000528036 PTPRUQ92729 1446 aa34.4■■■■□ 3.1
PKP3-206ENST00000528036 SETD5Q9C0A6 1442 aa34.4■■■■□ 3.1
PKP3-206ENST00000528036 CCDC144AA2RUR9 1427 aa34.38■■■■□ 3.09
PKP3-206ENST00000528036 NRXN3Q9Y4C0 1643 aa34.38■■■■□ 3.09
PKP3-206ENST00000528036 PHF23Q9BUL5 403 aaPredicted RBP34.37■■■■□ 3.09
PKP3-206ENST00000528036 METP08581 1390 aa34.36■■■■□ 3.09
PKP3-206ENST00000528036 SOCS7O14512 581 aa34.36■■■■□ 3.09
PKP3-206ENST00000528036 ROBO1Q9Y6N7 1651 aa34.35■■■■□ 3.09
PKP3-206ENST00000528036 DCCP43146 1447 aa34.35■■■■□ 3.09
PKP3-206ENST00000528036 FOXD1Q16676 465 aa34.32■■■■□ 3.08
PKP3-206ENST00000528036 XRN1Q8IZH2 1706 aaKnown RBP34.3■■■■□ 3.08
PKP3-206ENST00000528036 ANKRD30BQ9BXX2 1392 aa34.27■■■■□ 3.08
PKP3-206ENST00000528036 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.25■■■■□ 3.07
PKP3-206ENST00000528036 JCADQ9P266 1359 aa34.22■■■■□ 3.07
PKP3-206ENST00000528036 PTCH1Q13635 1447 aa34.21■■■■□ 3.07
PKP3-206ENST00000528036 SPATA31E1Q6ZUB1 1445 aa34.21■■■■□ 3.07
PKP3-206ENST00000528036 HRCP23327 699 aa34.21■■■■□ 3.07
PKP3-206ENST00000528036 RAB3GAP2Q9H2M9 1393 aa34.21■■■■□ 3.07
PKP3-206ENST00000528036 PRAG1Q86YV5 1406 aa34.21■■■■□ 3.07
PKP3-206ENST00000528036 RGL3Q3MIN7 710 aa34.2■■■■□ 3.07
PKP3-206ENST00000528036 ADGRL3Q9HAR2 1447 aa34.2■■■■□ 3.06
PKP3-206ENST00000528036 PPLO60437 1756 aa34.18■■■■□ 3.06
PKP3-206ENST00000528036 PHLPP1O60346 1717 aa34.15■■■■□ 3.06
PKP3-206ENST00000528036 BRINP3Q76B58 766 aa34.14■■■■□ 3.06
PKP3-206ENST00000528036 AHDC1Q5TGY3 1603 aaPredicted RBP34.12■■■■□ 3.05
PKP3-206ENST00000528036 ADGRF5Q8IZF2 1346 aa34.12■■■■□ 3.05
PKP3-206ENST00000528036 MST1RQ04912 1400 aa34.11■■■■□ 3.05
PKP3-206ENST00000528036 SPATA31A6Q5VVP1 1343 aa34.1■■■■□ 3.05
PKP3-206ENST00000528036 SETD1AO15047 1707 aaKnown RBP34.09■■■■□ 3.05
PKP3-206ENST00000528036 ROBO2Q9HCK4 1378 aa34.09■■■■□ 3.05
PKP3-206ENST00000528036 COL16A1Q07092 1604 aaPredicted RBP34.06■■■■□ 3.04
PKP3-206ENST00000528036 ASXL1Q8IXJ9 1541 aa34.03■■■■□ 3.04
PKP3-206ENST00000528036 PIK3C2GO75747 1445 aa34.03■■■■□ 3.04
PKP3-206ENST00000528036 LRPPRCP42704 1394 aaKnown RBP34.01■■■■□ 3.04
PKP3-206ENST00000528036 ABCC11Q96J66 1382 aa34.01■■■■□ 3.04
PKP3-206ENST00000528036 TECPR2O15040 1411 aa34■■■■□ 3.03
PKP3-206ENST00000528036 LRRC59Q96AG4 307 aaKnown RBP34■■■■□ 3.03
PKP3-206ENST00000528036 STAC3Q96MF2 364 aa33.99■■■■□ 3.03
PKP3-206ENST00000528036 RGS17Q9UGC6 210 aaPredicted RBP33.99■■■■□ 3.03
PKP3-206ENST00000528036 C1orf167Q5SNV9 1468 aa33.98■■■■□ 3.03
PKP3-206ENST00000528036 IFT172Q9UG01 1749 aa33.98■■■■□ 3.03
PKP3-206ENST00000528036 NALCNQ8IZF0 1738 aa33.97■■■■□ 3.03
PKP3-206ENST00000528036 SIRT1Q96EB6 747 aa33.97■■■■□ 3.03
PKP3-206ENST00000528036 C14orf93Q9H972 538 aaKnown RBP33.97■■■■□ 3.03
PKP3-206ENST00000528036 MYOM2P54296 1465 aa33.96■■■■□ 3.03
PKP3-206ENST00000528036 STK26Q9P289 416 aa33.93■■■■□ 3.02
PKP3-206ENST00000528036 NRXN1Q9ULB1 1477 aa33.93■■■■□ 3.02
PKP3-206ENST00000528036 DHX57Q6P158 1386 aaKnown RBP33.91■■■■□ 3.02
PKP3-206ENST00000528036 MEX3CQ5U5Q3 659 aaKnown RBP33.91■■■■□ 3.02
PKP3-206ENST00000528036 SHPRHQ149N8 1683 aa33.9■■■■□ 3.02
PKP3-206ENST00000528036 TMEM132EQ6IEE7 984 aa33.9■■■■□ 3.02
PKP3-206ENST00000528036 YTHDC2Q9H6S0 1430 aaKnown RBP33.89■■■■□ 3.02
PKP3-206ENST00000528036 NHSL1Q5SYE7 1610 aa33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms