RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
ATM-212ENST00000527805 CFAP43Q8NDM7 1665 aa19.09■□□□□ 0.65
ATM-212ENST00000527805 CDK19Q9BWU1 502 aa19.09■□□□□ 0.65
ATM-212ENST00000527805 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.65
ATM-212ENST00000527805 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.65
ATM-212ENST00000527805 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.64
ATM-212ENST00000527805 ADGRF5Q8IZF2 1346 aa19.08■□□□□ 0.64
ATM-212ENST00000527805 HSP90AA1P07900 732 aaKnown RBP19.08■□□□□ 0.64
ATM-212ENST00000527805 DIAPH1O60610 1272 aaKnown RBP19.07■□□□□ 0.64
ATM-212ENST00000527805 ESCO1Q5FWF5 840 aa19.07■□□□□ 0.64
ATM-212ENST00000527805 NLRP6P59044 892 aa19.07■□□□□ 0.64
ATM-212ENST00000527805 LMOD3Q0VAK6 560 aa19.07■□□□□ 0.64
ATM-212ENST00000527805 ABCC10Q5T3U5 1492 aa19.06■□□□□ 0.64
ATM-212ENST00000527805 CABP1Q9NZU7 370 aa19.06■□□□□ 0.64
ATM-212ENST00000527805 DUOX2Q9NRD8 1548 aa19.06■□□□□ 0.64
ATM-212ENST00000527805 B4GALNT3Q6L9W6 998 aa19.05■□□□□ 0.64
ATM-212ENST00000527805 PDE3BQ13370 1112 aa19.05■□□□□ 0.64
ATM-212ENST00000527805 APAF1O14727 1248 aa19.04■□□□□ 0.64
ATM-212ENST00000527805 IPO8O15397 1037 aaKnown RBP19.04■□□□□ 0.64
ATM-212ENST00000527805 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
ATM-212ENST00000527805 NPHP1O15259 732 aa19.03■□□□□ 0.64
ATM-212ENST00000527805 EVA1CP58658 441 aa19.02■□□□□ 0.64
ATM-212ENST00000527805 RGS3P49796 1198 aa19.01■□□□□ 0.63
ATM-212ENST00000527805 WAPLQ7Z5K2 1190 aa19.01■□□□□ 0.63
ATM-212ENST00000527805 RTEL1-TNFRSF6BF6WH68 1400 aa19.01■□□□□ 0.63
ATM-212ENST00000527805 MTHFSP49914 203 aa19■□□□□ 0.63
ATM-212ENST00000527805 ABTB2Q8N961 1025 aa19■□□□□ 0.63
ATM-212ENST00000527805 ZNF330Q9Y3S2 320 aaPredicted RBP19■□□□□ 0.63
ATM-212ENST00000527805 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
ATM-212ENST00000527805 SMC4Q9NTJ3 1288 aa18.99■□□□□ 0.63
ATM-212ENST00000527805 STK31Q9BXU1 1019 aa18.99■□□□□ 0.63
ATM-212ENST00000527805 NOS1P29475 1434 aa18.98■□□□□ 0.63
ATM-212ENST00000527805 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
ATM-212ENST00000527805 CHMP4AQ9BY43 222 aa18.97■□□□□ 0.63
ATM-212ENST00000527805 TNRQ92752 1358 aa18.96■□□□□ 0.63
ATM-212ENST00000527805 ZNF692Q9BU19 519 aaPredicted RBP18.96■□□□□ 0.63
ATM-212ENST00000527805 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
ATM-212ENST00000527805 HMOX1P09601 288 aa18.95■□□□□ 0.62
ATM-212ENST00000527805 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
ATM-212ENST00000527805 CHD1O14646 1710 aa18.95■□□□□ 0.62
ATM-212ENST00000527805 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
ATM-212ENST00000527805 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
ATM-212ENST00000527805 CLUAP1Q96AJ1 413 aa18.95■□□□□ 0.62
ATM-212ENST00000527805 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
ATM-212ENST00000527805 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
ATM-212ENST00000527805 CCDC61Q9Y6R9 512 aa18.94■□□□□ 0.62
ATM-212ENST00000527805 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
ATM-212ENST00000527805 AMOTL2Q9Y2J4 779 aa18.93■□□□□ 0.62
ATM-212ENST00000527805 C14orf93Q9H972 538 aaKnown RBP18.93■□□□□ 0.62
ATM-212ENST00000527805 ABCA8O94911 1581 aa18.93■□□□□ 0.62
ATM-212ENST00000527805 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
ATM-212ENST00000527805 RIPK4P57078 832 aa18.93■□□□□ 0.62
ATM-212ENST00000527805 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
ATM-212ENST00000527805 NUDT16Q96DE0 195 aaKnown RBP18.93■□□□□ 0.62
ATM-212ENST00000527805 TEFQ10587 303 aa18.92■□□□□ 0.62
ATM-212ENST00000527805 RUNDC1Q96C34 613 aa18.91■□□□□ 0.62
ATM-212ENST00000527805 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
ATM-212ENST00000527805 E9PSI1 815 aa18.91■□□□□ 0.62
ATM-212ENST00000527805 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
ATM-212ENST00000527805 UHRF1BP1LA0JNW5 1464 aa18.91■□□□□ 0.62
ATM-212ENST00000527805 BRD4O60885 1362 aaPredicted RBP18.9■□□□□ 0.62
ATM-212ENST00000527805 NLRP2Q9NX02 1062 aa18.9■□□□□ 0.62
ATM-212ENST00000527805 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
ATM-212ENST00000527805 BCL2L13Q9BXK5 485 aa18.89■□□□□ 0.61
ATM-212ENST00000527805 NGEFQ8N5V2 710 aa18.88■□□□□ 0.61
ATM-212ENST00000527805 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
ATM-212ENST00000527805 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
ATM-212ENST00000527805 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
ATM-212ENST00000527805 MAPKBP1O60336 1514 aa18.86■□□□□ 0.61
ATM-212ENST00000527805 APBB1O00213 710 aa18.85■□□□□ 0.61
ATM-212ENST00000527805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.85■□□□□ 0.61
ATM-212ENST00000527805 XPCQ01831 940 aaPredicted RBP18.85■□□□□ 0.61
ATM-212ENST00000527805 ERCC6L2Q5T890 1561 aa18.85■□□□□ 0.61
ATM-212ENST00000527805 CASC1Q6TDU7 716 aa18.84■□□□□ 0.61
ATM-212ENST00000527805 ATP7AQ04656 1500 aa18.83■□□□□ 0.61
ATM-212ENST00000527805 ZMYM3Q14202 1370 aa18.83■□□□□ 0.61
ATM-212ENST00000527805 ERICH6BQ5W0A0 696 aa18.83■□□□□ 0.6
ATM-212ENST00000527805 NEO1Q92859 1461 aa18.82■□□□□ 0.6
ATM-212ENST00000527805 WASLO00401 505 aaPredicted RBP18.82■□□□□ 0.6
ATM-212ENST00000527805 ADGRL2O95490 1459 aa18.82■□□□□ 0.6
ATM-212ENST00000527805 SCAF11Q99590 1463 aaKnown RBP18.82■□□□□ 0.6
ATM-212ENST00000527805 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
ATM-212ENST00000527805 ATP10AO60312 1499 aa18.82■□□□□ 0.6
ATM-212ENST00000527805 NSD3Q9BZ95 1437 aa18.8■□□□□ 0.6
ATM-212ENST00000527805 PLIN1O60240 522 aa18.8■□□□□ 0.6
ATM-212ENST00000527805 PRKAR2BP31323 418 aa18.8■□□□□ 0.6
ATM-212ENST00000527805 MEX3CQ5U5Q3 659 aaKnown RBP18.8■□□□□ 0.6
ATM-212ENST00000527805 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
ATM-212ENST00000527805 TTC5Q8N0Z6 440 aa18.79■□□□□ 0.6
ATM-212ENST00000527805 USP35Q9P2H5 1018 aa18.79■□□□□ 0.6
ATM-212ENST00000527805 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
ATM-212ENST00000527805 PZPP20742 1482 aa18.78■□□□□ 0.6
ATM-212ENST00000527805 TCERG1O14776 1098 aaKnown RBP18.78■□□□□ 0.6
ATM-212ENST00000527805 EIF2S2P20042 333 aaKnown RBP18.77■□□□□ 0.6
ATM-212ENST00000527805 SYTL4Q96C24 671 aaPredicted RBP18.77■□□□□ 0.6
ATM-212ENST00000527805 MBD5Q9P267 1494 aa18.76■□□□□ 0.59
ATM-212ENST00000527805 CCDC184Q52MB2 194 aa18.76■□□□□ 0.59
ATM-212ENST00000527805 RIMS2Q9UQ26 1411 aa18.76■□□□□ 0.59
ATM-212ENST00000527805 PNISRQ8TF01 805 aaKnown RBP18.76■□□□□ 0.59
ATM-212ENST00000527805 FOXO3O43524 673 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms