RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
ATM-211ENST00000527389 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
ATM-211ENST00000527389 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
ATM-211ENST00000527389 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
ATM-211ENST00000527389 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
ATM-211ENST00000527389 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
ATM-211ENST00000527389 BCAMP50895 628 aa12.73□□□□□ -0.37
ATM-211ENST00000527389 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
ATM-211ENST00000527389 CLCN1P35523 988 aa12.72□□□□□ -0.37
ATM-211ENST00000527389 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
ATM-211ENST00000527389 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
ATM-211ENST00000527389 PDE4DQ08499 809 aa12.71□□□□□ -0.37
ATM-211ENST00000527389 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
ATM-211ENST00000527389 TSR3Q9UJK0 312 aaKnown RBP12.7□□□□□ -0.38
ATM-211ENST00000527389 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
ATM-211ENST00000527389 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
ATM-211ENST00000527389 REPIN1Q9BWE0 567 aaKnown RBP12.68□□□□□ -0.38
ATM-211ENST00000527389 HPS5Q9UPZ3 1129 aa12.68□□□□□ -0.38
ATM-211ENST00000527389 TTLL12Q14166 644 aaPredicted RBP12.67□□□□□ -0.38
ATM-211ENST00000527389 SULF1Q8IWU6 871 aa12.67□□□□□ -0.38
ATM-211ENST00000527389 FAM217BQ9NTX9 383 aaPredicted RBP12.66□□□□□ -0.38
ATM-211ENST00000527389 SLC10A3P09131 477 aa12.65□□□□□ -0.38
ATM-211ENST00000527389 RNF40O75150 1001 aa12.64□□□□□ -0.39
ATM-211ENST00000527389 PPP4CP60510 307 aa12.64□□□□□ -0.39
ATM-211ENST00000527389 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
ATM-211ENST00000527389 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
ATM-211ENST00000527389 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
ATM-211ENST00000527389 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
ATM-211ENST00000527389 DDX11L8A8MPP1 907 aa12.62□□□□□ -0.39
ATM-211ENST00000527389 CD46P15529 392 aa12.62□□□□□ -0.39
ATM-211ENST00000527389 PTPN5P54829 565 aa12.62□□□□□ -0.39
ATM-211ENST00000527389 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
ATM-211ENST00000527389 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
ATM-211ENST00000527389 RDH13Q8NBN7 331 aa12.58□□□□□ -0.4
ATM-211ENST00000527389 PRR14Q9BWN1 585 aa12.58□□□□□ -0.4
ATM-211ENST00000527389 CFHP08603 1231 aa12.57□□□□□ -0.4
ATM-211ENST00000527389 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
ATM-211ENST00000527389 MS4A1P11836 297 aa12.56□□□□□ -0.4
ATM-211ENST00000527389 GCGRP47871 477 aa12.56□□□□□ -0.4
ATM-211ENST00000527389 APLP1P51693 650 aa12.56□□□□□ -0.4
ATM-211ENST00000527389 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
ATM-211ENST00000527389 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
ATM-211ENST00000527389 KDM4CQ9H3R0 1056 aa12.55□□□□□ -0.4
ATM-211ENST00000527389 GPBP1L1Q9HC44 474 aaPredicted RBP12.55□□□□□ -0.4
ATM-211ENST00000527389 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
ATM-211ENST00000527389 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
ATM-211ENST00000527389 BEGAINQ9BUH8 593 aa12.49□□□□□ -0.41
ATM-211ENST00000527389 KDM4AO75164 1064 aa12.47□□□□□ -0.41
ATM-211ENST00000527389 USP46P62068 366 aa12.47□□□□□ -0.41
ATM-211ENST00000527389 FUT2Q10981 343 aa12.46□□□□□ -0.41
ATM-211ENST00000527389 PCDHB3Q9Y5E6 796 aa12.46□□□□□ -0.41
ATM-211ENST00000527389 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
ATM-211ENST00000527389 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
ATM-211ENST00000527389 SPIRE2Q8WWL2 714 aa12.44□□□□□ -0.42
ATM-211ENST00000527389 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
ATM-211ENST00000527389 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
ATM-211ENST00000527389 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
ATM-211ENST00000527389 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
ATM-211ENST00000527389 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
ATM-211ENST00000527389 HOXA2O43364 376 aa12.42□□□□□ -0.42
ATM-211ENST00000527389 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
ATM-211ENST00000527389 MTRQ99707 1265 aa12.42□□□□□ -0.42
ATM-211ENST00000527389 MORN1Q5T089 497 aa12.41□□□□□ -0.42
ATM-211ENST00000527389 BLOC1S3Q6QNY0 202 aa12.41□□□□□ -0.42
ATM-211ENST00000527389 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
ATM-211ENST00000527389 IL21Q9HBE4 155 aa12.4□□□□□ -0.42
ATM-211ENST00000527389 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
ATM-211ENST00000527389 PUS10Q3MIT2 529 aaKnown RBP12.39□□□□□ -0.43
ATM-211ENST00000527389 NR1I2O75469 434 aa12.37□□□□□ -0.43
ATM-211ENST00000527389 COPS2P61201 443 aa12.37□□□□□ -0.43
ATM-211ENST00000527389 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
ATM-211ENST00000527389 GJA5P36382 358 aa12.36□□□□□ -0.43
ATM-211ENST00000527389 ZPR1O75312 459 aa12.35□□□□□ -0.43
ATM-211ENST00000527389 KCNC4Q03721 635 aa12.35□□□□□ -0.43
ATM-211ENST00000527389 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
ATM-211ENST00000527389 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
ATM-211ENST00000527389 MOXD2PA6NHM9 499 aa12.34□□□□□ -0.43
ATM-211ENST00000527389 MYSM1Q5VVJ2 828 aa12.34□□□□□ -0.43
ATM-211ENST00000527389 SCUBE3Q8IX30 993 aa12.34□□□□□ -0.43
ATM-211ENST00000527389 HLA-CQ95604 372 aa12.34□□□□□ -0.43
ATM-211ENST00000527389 SALL2Q9Y467 1007 aaPredicted RBP12.34□□□□□ -0.43
ATM-211ENST00000527389 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
ATM-211ENST00000527389 RSBN1LQ6PCB5 846 aaPredicted RBP12.33□□□□□ -0.44
ATM-211ENST00000527389 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
ATM-211ENST00000527389 SPTLC1O15269 473 aa12.32□□□□□ -0.44
ATM-211ENST00000527389 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
ATM-211ENST00000527389 FDX1P10109 184 aa12.31□□□□□ -0.44
ATM-211ENST00000527389 NDUFV2P19404 249 aa12.31□□□□□ -0.44
ATM-211ENST00000527389 THAP11Q96EK4 314 aa12.31□□□□□ -0.44
ATM-211ENST00000527389 GUCA2AQ02747 115 aa12.3□□□□□ -0.44
ATM-211ENST00000527389 TUSC1Q2TAM9 212 aa12.3□□□□□ -0.44
ATM-211ENST00000527389 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
ATM-211ENST00000527389 Q3C1V9 767 aa12.29□□□□□ -0.44
ATM-211ENST00000527389 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
ATM-211ENST00000527389 GOPCQ9HD26 462 aa12.29□□□□□ -0.44
ATM-211ENST00000527389 PCDHGC3Q9UN70 934 aa12.29□□□□□ -0.44
ATM-211ENST00000527389 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
ATM-211ENST00000527389 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
ATM-211ENST00000527389 BRICD5Q6PL45 260 aa12.28□□□□□ -0.44
ATM-211ENST00000527389 TLL1O43897 1013 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms