RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 TNFRSF10AO00220 468 aa7.86□□□□□ -1.15
CLNS1A-208ENST00000527265 WFS1O76024 890 aa7.86□□□□□ -1.15
CLNS1A-208ENST00000527265 INSM1Q01101 510 aaPredicted RBP7.86□□□□□ -1.15
CLNS1A-208ENST00000527265 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
CLNS1A-208ENST00000527265 ST8SIA5O15466 376 aa7.84□□□□□ -1.15
CLNS1A-208ENST00000527265 LCE2AQ5TA79 106 aaPredicted RBP7.84□□□□□ -1.15
CLNS1A-208ENST00000527265 AAASQ9NRG9 546 aa7.84□□□□□ -1.15
CLNS1A-208ENST00000527265 GRXCR2A6NFK2 248 aa7.83□□□□□ -1.16
CLNS1A-208ENST00000527265 PRKCSHP14314 528 aaPredicted RBP7.83□□□□□ -1.16
CLNS1A-208ENST00000527265 GDF9O60383 454 aa7.82□□□□□ -1.16
CLNS1A-208ENST00000527265 PLCB2Q00722 1185 aa7.82□□□□□ -1.16
CLNS1A-208ENST00000527265 BLOC1S3Q6QNY0 202 aa7.82□□□□□ -1.16
CLNS1A-208ENST00000527265 EMID1Q96A84 441 aaPredicted RBP7.81□□□□□ -1.16
CLNS1A-208ENST00000527265 S1PR4O95977 384 aa7.8□□□□□ -1.16
CLNS1A-208ENST00000527265 LMOD2Q6P5Q4 547 aa7.8□□□□□ -1.16
CLNS1A-208ENST00000527265 LIAT1Q6ZQX7 453 aa7.8□□□□□ -1.16
CLNS1A-208ENST00000527265 C11orf95C9JLR9 678 aaPredicted RBP7.79□□□□□ -1.16
CLNS1A-208ENST00000527265 PPEF1O14829 653 aaPredicted RBP7.79□□□□□ -1.16
CLNS1A-208ENST00000527265 TLL1O43897 1013 aa7.79□□□□□ -1.16
CLNS1A-208ENST00000527265 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
CLNS1A-208ENST00000527265 CDHR5Q9HBB8 845 aa7.78□□□□□ -1.16
CLNS1A-208ENST00000527265 WIPF1O43516 503 aa7.77□□□□□ -1.17
CLNS1A-208ENST00000527265 FOXC1Q12948 553 aa7.77□□□□□ -1.17
CLNS1A-208ENST00000527265 PADI6Q6TGC4 694 aa7.77□□□□□ -1.17
CLNS1A-208ENST00000527265 CRIPAKQ8N1N5 446 aa7.77□□□□□ -1.17
CLNS1A-208ENST00000527265 AXIN1O15169 862 aa7.76□□□□□ -1.17
CLNS1A-208ENST00000527265 BCANQ96GW7 911 aa7.76□□□□□ -1.17
CLNS1A-208ENST00000527265 FAM181BA6NEQ2 426 aa7.75□□□□□ -1.17
CLNS1A-208ENST00000527265 ADH1BP00325 375 aa7.75□□□□□ -1.17
CLNS1A-208ENST00000527265 PRIM1P49642 420 aaKnown RBP7.75□□□□□ -1.17
CLNS1A-208ENST00000527265 CTC1Q2NKJ3 1217 aa7.75□□□□□ -1.17
CLNS1A-208ENST00000527265 SLC6A16Q9GZN6 736 aa7.75□□□□□ -1.17
CLNS1A-208ENST00000527265 NR1I2O75469 434 aa7.74□□□□□ -1.17
CLNS1A-208ENST00000527265 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
CLNS1A-208ENST00000527265 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
CLNS1A-208ENST00000527265 TTC13Q8NBP0 860 aa7.73□□□□□ -1.17
CLNS1A-208ENST00000527265 ACTN4O43707 911 aaKnown RBP7.72□□□□□ -1.17
CLNS1A-208ENST00000527265 OSBPP22059 807 aa7.72□□□□□ -1.17
CLNS1A-208ENST00000527265 DNAJB2P25686 324 aa7.72□□□□□ -1.17
CLNS1A-208ENST00000527265 HAP1P54257 671 aaPredicted RBP7.72□□□□□ -1.17
CLNS1A-208ENST00000527265 CYP4X1Q8N118 509 aa7.72□□□□□ -1.17
CLNS1A-208ENST00000527265 BBXQ8WY36 941 aaPredicted RBP7.72□□□□□ -1.17
CLNS1A-208ENST00000527265 AVPP01185 164 aa7.71□□□□□ -1.18
CLNS1A-208ENST00000527265 E2F4Q16254 413 aa7.71□□□□□ -1.18
CLNS1A-208ENST00000527265 EYA1Q99502 592 aa7.71□□□□□ -1.18
CLNS1A-208ENST00000527265 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.7□□□□□ -1.18
CLNS1A-208ENST00000527265 DACH1Q9UI36 760 aa7.7□□□□□ -1.18
CLNS1A-208ENST00000527265 CFHP08603 1231 aa7.69□□□□□ -1.18
CLNS1A-208ENST00000527265 PKD2L1Q9P0L9 805 aa7.69□□□□□ -1.18
CLNS1A-208ENST00000527265 CD2BP2O95400 341 aaKnown RBP7.68□□□□□ -1.18
CLNS1A-208ENST00000527265 PLA2G2CQ5R387 149 aa7.68□□□□□ -1.18
CLNS1A-208ENST00000527265 RBM46Q8TBY0 533 aaKnown RBP7.68□□□□□ -1.18
CLNS1A-208ENST00000527265 RPIAP49247 311 aa7.67□□□□□ -1.18
CLNS1A-208ENST00000527265 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
CLNS1A-208ENST00000527265 WDR70Q9NW82 654 aa7.67□□□□□ -1.18
CLNS1A-208ENST00000527265 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
CLNS1A-208ENST00000527265 TMEM134Q9H6X4 195 aa7.66□□□□□ -1.18
CLNS1A-208ENST00000527265 NPDC1Q9NQX5 325 aaPredicted RBP7.66□□□□□ -1.18
CLNS1A-208ENST00000527265 TOR4AQ9NXH8 423 aa7.66□□□□□ -1.18
CLNS1A-208ENST00000527265 TTC24A2A3L6 582 aaPredicted RBP7.65□□□□□ -1.18
CLNS1A-208ENST00000527265 TERTO14746 1132 aaKnown RBP7.65□□□□□ -1.18
CLNS1A-208ENST00000527265 PAXIP1Q6ZW49 1069 aaPredicted RBP7.65□□□□□ -1.18
CLNS1A-208ENST00000527265 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
CLNS1A-208ENST00000527265 CFAP44Q96MT7 982 aa7.64□□□□□ -1.19
CLNS1A-208ENST00000527265 SPSB2Q99619 263 aa7.64□□□□□ -1.19
CLNS1A-208ENST00000527265 RSPH4AQ5TD94 716 aa7.63□□□□□ -1.19
CLNS1A-208ENST00000527265 TPRNQ4KMQ1 711 aa7.62□□□□□ -1.19
CLNS1A-208ENST00000527265 SCUBE3Q8IX30 993 aa7.62□□□□□ -1.19
CLNS1A-208ENST00000527265 SLC16A10Q8TF71 515 aa7.62□□□□□ -1.19
CLNS1A-208ENST00000527265 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
CLNS1A-208ENST00000527265 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
CLNS1A-208ENST00000527265 ATP13A2Q9NQ11 1180 aa7.61□□□□□ -1.19
CLNS1A-208ENST00000527265 ZBTB24O43167 697 aaPredicted RBP7.6□□□□□ -1.19
CLNS1A-208ENST00000527265 SPRYD3Q8NCJ5 442 aa7.6□□□□□ -1.19
CLNS1A-208ENST00000527265 KIFC2Q96AC6 838 aa7.6□□□□□ -1.19
CLNS1A-208ENST00000527265 TRIM47Q96LD4 638 aa7.6□□□□□ -1.19
CLNS1A-208ENST00000527265 FCF1Q9Y324 198 aaKnown RBP7.6□□□□□ -1.19
CLNS1A-208ENST00000527265 RCCD1A6NED2 376 aa7.59□□□□□ -1.19
CLNS1A-208ENST00000527265 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
CLNS1A-208ENST00000527265 VSIG10Q8N0Z9 540 aa7.58□□□□□ -1.2
CLNS1A-208ENST00000527265 PUS10Q3MIT2 529 aaKnown RBP7.56□□□□□ -1.2
CLNS1A-208ENST00000527265 ZSCAN1Q8NBB4 408 aa7.56□□□□□ -1.2
CLNS1A-208ENST00000527265 SNIP1Q8TAD8 396 aaKnown RBP7.56□□□□□ -1.2
CLNS1A-208ENST00000527265 ADGRG1Q9Y653 693 aa7.56□□□□□ -1.2
CLNS1A-208ENST00000527265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.55□□□□□ -1.2
CLNS1A-208ENST00000527265 SLC10A3P09131 477 aa7.55□□□□□ -1.2
CLNS1A-208ENST00000527265 DAXXQ9UER7 740 aaPredicted RBP7.55□□□□□ -1.2
CLNS1A-208ENST00000527265 WNT7AO00755 349 aa7.53□□□□□ -1.2
CLNS1A-208ENST00000527265 PTGDRQ13258 359 aa7.53□□□□□ -1.2
CLNS1A-208ENST00000527265 IRF7Q92985 503 aa7.53□□□□□ -1.2
CLNS1A-208ENST00000527265 FMNL1O95466 1100 aaPredicted RBP7.52□□□□□ -1.21
CLNS1A-208ENST00000527265 SMPD1P17405 629 aa7.52□□□□□ -1.21
CLNS1A-208ENST00000527265 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
CLNS1A-208ENST00000527265 TSHZ2Q9NRE2 1034 aa7.52□□□□□ -1.21
CLNS1A-208ENST00000527265 NXF1Q9UBU9 619 aaKnown RBP7.51□□□□□ -1.21
CLNS1A-208ENST00000527265 TIMELESSQ9UNS1 1208 aa7.51□□□□□ -1.21
CLNS1A-208ENST00000527265 KDM2AQ9Y2K7 1162 aa7.51□□□□□ -1.21
CLNS1A-208ENST00000527265 REPIN1Q9BWE0 567 aaKnown RBP7.5□□□□□ -1.21
CLNS1A-208ENST00000527265 OATP04181 439 aa7.49□□□□□ -1.21
CLNS1A-208ENST00000527265 GMPRP36959 345 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms