RNA–Protein interactions for RNA: ENST00000527011.5

VAV3-210, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene VAV3, Length 4,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-210ENST00000527011 CFAP44Q96MT7 982 aa20.45■□□□□ 0.86
VAV3-210ENST00000527011 ZHX1Q9UKY1 873 aaPredicted RBP20.45■□□□□ 0.86
VAV3-210ENST00000527011 PRPF40AO75400 957 aaKnown RBP20.45■□□□□ 0.86
VAV3-210ENST00000527011 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.86
VAV3-210ENST00000527011 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
VAV3-210ENST00000527011 NUCB2P80303 420 aa20.44■□□□□ 0.86
VAV3-210ENST00000527011 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
VAV3-210ENST00000527011 TCP11L2Q8N4U5 519 aa20.42■□□□□ 0.86
VAV3-210ENST00000527011 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
VAV3-210ENST00000527011 TBC1D32Q96NH3 1257 aa20.41■□□□□ 0.86
VAV3-210ENST00000527011 CCDC39Q9UFE4 941 aa20.41■□□□□ 0.86
VAV3-210ENST00000527011 PHF14O94880 888 aa20.41■□□□□ 0.86
VAV3-210ENST00000527011 ZRSR1Q15695 479 aaKnown RBP20.41■□□□□ 0.86
VAV3-210ENST00000527011 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
VAV3-210ENST00000527011 TNPO1Q92973 898 aaKnown RBP20.4■□□□□ 0.86
VAV3-210ENST00000527011 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
VAV3-210ENST00000527011 TNNT3P45378 269 aaPredicted RBP20.39■□□□□ 0.86
VAV3-210ENST00000527011 PCF11O94913 1555 aaKnown RBP20.39■□□□□ 0.85
VAV3-210ENST00000527011 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
VAV3-210ENST00000527011 AAMPQ13685 434 aa20.38■□□□□ 0.85
VAV3-210ENST00000527011 SRPK2P78362 688 aaKnown RBP20.38■□□□□ 0.85
VAV3-210ENST00000527011 KIAA1107Q9UPP5 1409 aa20.37■□□□□ 0.85
VAV3-210ENST00000527011 ANKRD50Q9ULJ7 1429 aa20.37■□□□□ 0.85
VAV3-210ENST00000527011 DHX29Q7Z478 1369 aaKnown RBP20.37■□□□□ 0.85
VAV3-210ENST00000527011 PTPN23Q9H3S7 1636 aa20.37■□□□□ 0.85
VAV3-210ENST00000527011 KCNJ4P48050 445 aa20.36■□□□□ 0.85
VAV3-210ENST00000527011 RPRD2Q5VT52 1461 aaKnown RBP20.35■□□□□ 0.85
VAV3-210ENST00000527011 GOLGA6L6A8MZA4 724 aa20.35■□□□□ 0.85
VAV3-210ENST00000527011 TRIM6-TRIM34B2RNG4 842 aa20.35■□□□□ 0.85
VAV3-210ENST00000527011 K7ELQ4 463 aaPredicted RBP20.35■□□□□ 0.85
VAV3-210ENST00000527011 CIZ1Q9ULV3 898 aaPredicted RBP20.34■□□□□ 0.85
VAV3-210ENST00000527011 TRAK1Q9UPV9 953 aa20.34■□□□□ 0.85
VAV3-210ENST00000527011 ZNF592Q92610 1267 aa20.34■□□□□ 0.85
VAV3-210ENST00000527011 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.84
VAV3-210ENST00000527011 CBX1P83916 185 aa20.32■□□□□ 0.84
VAV3-210ENST00000527011 SSFA2P28290 1259 aa20.32■□□□□ 0.84
VAV3-210ENST00000527011 LRPPRCP42704 1394 aaKnown RBP20.31■□□□□ 0.84
VAV3-210ENST00000527011 MVPQ14764 893 aaKnown RBP20.3■□□□□ 0.84
VAV3-210ENST00000527011 TAOK2Q9UL54 1235 aa20.3■□□□□ 0.84
VAV3-210ENST00000527011 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
VAV3-210ENST00000527011 WWC1Q8IX03 1113 aa20.3■□□□□ 0.84
VAV3-210ENST00000527011 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
VAV3-210ENST00000527011 STK26Q9P289 416 aa20.3■□□□□ 0.84
VAV3-210ENST00000527011 C1orf115Q9H7X2 142 aa20.29■□□□□ 0.84
VAV3-210ENST00000527011 KDM2BQ8NHM5 1336 aa20.29■□□□□ 0.84
VAV3-210ENST00000527011 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
VAV3-210ENST00000527011 HMGN5P82970 282 aaKnown RBP20.28■□□□□ 0.84
VAV3-210ENST00000527011 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
VAV3-210ENST00000527011 PCDHB15Q9Y5E8 787 aa20.28■□□□□ 0.84
VAV3-210ENST00000527011 SYCE3A1L190 88 aa20.27■□□□□ 0.84
VAV3-210ENST00000527011 NRDCO43847 1150 aa20.27■□□□□ 0.84
VAV3-210ENST00000527011 CDC45O75419 566 aa20.27■□□□□ 0.84
VAV3-210ENST00000527011 MTHFSP49914 203 aa20.27■□□□□ 0.84
VAV3-210ENST00000527011 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
VAV3-210ENST00000527011 RARSP54136 660 aaKnown RBP20.26■□□□□ 0.83
VAV3-210ENST00000527011 REC8O95072 547 aa20.26■□□□□ 0.83
VAV3-210ENST00000527011 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
VAV3-210ENST00000527011 RIPK4P57078 832 aa20.25■□□□□ 0.83
VAV3-210ENST00000527011 OS9Q13438 667 aaPredicted RBP20.25■□□□□ 0.83
VAV3-210ENST00000527011 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
VAV3-210ENST00000527011 FGD1P98174 961 aa20.25■□□□□ 0.83
VAV3-210ENST00000527011 TSPY26PQ9H489 355 aa20.24■□□□□ 0.83
VAV3-210ENST00000527011 NOB1Q9ULX3 412 aaKnown RBP20.24■□□□□ 0.83
VAV3-210ENST00000527011 DAPK1P53355 1430 aa20.23■□□□□ 0.83
VAV3-210ENST00000527011 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
VAV3-210ENST00000527011 MBD3O95983 291 aa20.23■□□□□ 0.83
VAV3-210ENST00000527011 INTS3Q68E01 1043 aaKnown RBP20.23■□□□□ 0.83
VAV3-210ENST00000527011 SASS6Q6UVJ0 657 aa20.22■□□□□ 0.83
VAV3-210ENST00000527011 IFT57Q9NWB7 429 aa20.22■□□□□ 0.83
VAV3-210ENST00000527011 NAP1L2Q9ULW6 460 aaPredicted RBP20.22■□□□□ 0.83
VAV3-210ENST00000527011 NEK4P51957 841 aa20.22■□□□□ 0.83
VAV3-210ENST00000527011 RABEP1Q15276 862 aa20.22■□□□□ 0.83
VAV3-210ENST00000527011 CHD1LQ86WJ1 897 aa20.21■□□□□ 0.83
VAV3-210ENST00000527011 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
VAV3-210ENST00000527011 ANO2Q9NQ90 1003 aa20.21■□□□□ 0.83
VAV3-210ENST00000527011 OFD1O75665 1012 aa20.2■□□□□ 0.82
VAV3-210ENST00000527011 NINLQ9Y2I6 1382 aa20.2■□□□□ 0.82
VAV3-210ENST00000527011 ERBINQ96RT1 1412 aa20.2■□□□□ 0.82
VAV3-210ENST00000527011 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
VAV3-210ENST00000527011 PLEKHG5O94827 1062 aa20.2■□□□□ 0.82
VAV3-210ENST00000527011 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
VAV3-210ENST00000527011 SPC24Q8NBT2 197 aa20.2■□□□□ 0.82
VAV3-210ENST00000527011 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
VAV3-210ENST00000527011 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
VAV3-210ENST00000527011 HMMRO75330 724 aa20.19■□□□□ 0.82
VAV3-210ENST00000527011 TNNQ9UQP3 1299 aa20.19■□□□□ 0.82
VAV3-210ENST00000527011 FANCD2Q9BXW9 1451 aa20.19■□□□□ 0.82
VAV3-210ENST00000527011 PLEKHH1Q9ULM0 1364 aa20.19■□□□□ 0.82
VAV3-210ENST00000527011 SOX12O15370 315 aa20.19■□□□□ 0.82
VAV3-210ENST00000527011 BAG4O95429 457 aaKnown RBP20.18■□□□□ 0.82
VAV3-210ENST00000527011 SPINK5Q9NQ38 1064 aaPredicted RBP20.17■□□□□ 0.82
VAV3-210ENST00000527011 RBM27Q9P2N5 1060 aaKnown RBP20.17■□□□□ 0.82
VAV3-210ENST00000527011 PLEKHH2Q8IVE3 1493 aa20.17■□□□□ 0.82
VAV3-210ENST00000527011 PDCL2Q8N4E4 241 aa20.17■□□□□ 0.82
VAV3-210ENST00000527011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.16■□□□□ 0.82
VAV3-210ENST00000527011 DYNC1I1O14576 645 aa20.16■□□□□ 0.82
VAV3-210ENST00000527011 KLHL40Q2TBA0 621 aa20.16■□□□□ 0.82
VAV3-210ENST00000527011 SPDYE4A6NLX3 237 aa20.16■□□□□ 0.82
VAV3-210ENST00000527011 TMEM57Q8N5G2 664 aa20.15■□□□□ 0.82
VAV3-210ENST00000527011 PARD3Q8TEW0 1356 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms