RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 TRPM1Q7Z4N2 1603 aa20.62■□□□□ 0.89
COLCA2-202ENST00000526216 UBR1Q8IWV7 1749 aa20.62■□□□□ 0.89
COLCA2-202ENST00000526216 RALGAPBQ86X10 1494 aa20.61■□□□□ 0.89
COLCA2-202ENST00000526216 NRXN1Q9ULB1 1477 aa20.61■□□□□ 0.89
COLCA2-202ENST00000526216 KDM5AP29375 1690 aaKnown RBP20.6■□□□□ 0.89
COLCA2-202ENST00000526216 NLRP1Q9C000 1473 aa20.6■□□□□ 0.89
COLCA2-202ENST00000526216 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
COLCA2-202ENST00000526216 RPGRIP1LQ68CZ1 1315 aa20.57■□□□□ 0.88
COLCA2-202ENST00000526216 ADGRF5Q8IZF2 1346 aa20.57■□□□□ 0.88
COLCA2-202ENST00000526216 ZFYVE9O95405 1425 aa20.54■□□□□ 0.88
COLCA2-202ENST00000526216 KDM4FA0A1W2PPD8 638 aa20.53■□□□□ 0.88
COLCA2-202ENST00000526216 STAC3Q96MF2 364 aa20.53■□□□□ 0.88
COLCA2-202ENST00000526216 CEP170BQ9Y4F5 1589 aaPredicted RBP20.53■□□□□ 0.88
COLCA2-202ENST00000526216 ZNF142P52746 1687 aaPredicted RBP20.53■□□□□ 0.88
COLCA2-202ENST00000526216 KIAA1210Q9ULL0 1709 aa20.53■□□□□ 0.88
COLCA2-202ENST00000526216 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
COLCA2-202ENST00000526216 RIMS2Q9UQ26 1411 aa20.53■□□□□ 0.88
COLCA2-202ENST00000526216 NUTM2DQ5VT03 806 aaPredicted RBP20.52■□□□□ 0.87
COLCA2-202ENST00000526216 LAMC1P11047 1609 aa20.51■□□□□ 0.87
COLCA2-202ENST00000526216 NBPF1Q3BBV0 1214 aa20.51■□□□□ 0.87
COLCA2-202ENST00000526216 STAG3Q9UJ98 1225 aa20.51■□□□□ 0.87
COLCA2-202ENST00000526216 GPRASP1Q5JY77 1395 aa20.5■□□□□ 0.87
COLCA2-202ENST00000526216 ARHGAP23Q9P227 1491 aa20.49■□□□□ 0.87
COLCA2-202ENST00000526216 TMEM2Q9UHN6 1383 aa20.48■□□□□ 0.87
COLCA2-202ENST00000526216 SLIT1O75093 1534 aa20.47■□□□□ 0.87
COLCA2-202ENST00000526216 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
COLCA2-202ENST00000526216 CFAP70Q5T0N1 1121 aa20.46■□□□□ 0.87
COLCA2-202ENST00000526216 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
COLCA2-202ENST00000526216 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
COLCA2-202ENST00000526216 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
COLCA2-202ENST00000526216 ASXL1Q8IXJ9 1541 aa20.44■□□□□ 0.86
COLCA2-202ENST00000526216 ADGRB1O14514 1584 aa20.44■□□□□ 0.86
COLCA2-202ENST00000526216 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
COLCA2-202ENST00000526216 IQGAP1P46940 1657 aa20.44■□□□□ 0.86
COLCA2-202ENST00000526216 ADRA2BP18089 450 aa20.43■□□□□ 0.86
COLCA2-202ENST00000526216 HIRIP3Q9BW71 556 aaPredicted RBP20.43■□□□□ 0.86
COLCA2-202ENST00000526216 SETD1AO15047 1707 aaKnown RBP20.43■□□□□ 0.86
COLCA2-202ENST00000526216 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
COLCA2-202ENST00000526216 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
COLCA2-202ENST00000526216 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
COLCA2-202ENST00000526216 SETD1BQ9UPS6 1966 aaKnown RBP20.42■□□□□ 0.86
COLCA2-202ENST00000526216 USP47Q96K76 1375 aa20.42■□□□□ 0.86
COLCA2-202ENST00000526216 ALKQ9UM73 1620 aa20.41■□□□□ 0.86
COLCA2-202ENST00000526216 LTKP29376 864 aa20.4■□□□□ 0.86
COLCA2-202ENST00000526216 EIF4G2P78344 907 aaKnown RBP eCLIP20.39■□□□□ 0.85
COLCA2-202ENST00000526216 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
COLCA2-202ENST00000526216 THEMISQ8N1K5 641 aaPredicted RBP20.37■□□□□ 0.85
COLCA2-202ENST00000526216 SCAF11Q99590 1463 aaKnown RBP20.35■□□□□ 0.85
COLCA2-202ENST00000526216 PLEKHG1Q9ULL1 1385 aa20.35■□□□□ 0.85
COLCA2-202ENST00000526216 ADAMTS13Q76LX8 1427 aa20.34■□□□□ 0.85
COLCA2-202ENST00000526216 TMEM132EQ6IEE7 984 aa20.33■□□□□ 0.85
COLCA2-202ENST00000526216 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
COLCA2-202ENST00000526216 MED14O60244 1454 aa20.32■□□□□ 0.84
COLCA2-202ENST00000526216 HDGFP51858 240 aaKnown RBP20.31■□□□□ 0.84
COLCA2-202ENST00000526216 ST20-MTHFSA0A0A6YYL1 179 aa20.29■□□□□ 0.84
COLCA2-202ENST00000526216 EID1Q9Y6B2 187 aa20.29■□□□□ 0.84
COLCA2-202ENST00000526216 ARHGEF28Q8N1W1 1705 aaKnown RBP20.29■□□□□ 0.84
COLCA2-202ENST00000526216 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
COLCA2-202ENST00000526216 METP08581 1390 aa20.28■□□□□ 0.84
COLCA2-202ENST00000526216 LMTK3Q96Q04 1460 aa20.28■□□□□ 0.84
COLCA2-202ENST00000526216 POLR1AO95602 1720 aaPredicted RBP20.28■□□□□ 0.84
COLCA2-202ENST00000526216 YTHDC2Q9H6S0 1430 aaKnown RBP20.27■□□□□ 0.84
COLCA2-202ENST00000526216 TESK2Q96S53 571 aa20.26■□□□□ 0.83
COLCA2-202ENST00000526216 DIP2AQ14689 1571 aa20.25■□□□□ 0.83
COLCA2-202ENST00000526216 TRAK1Q9UPV9 953 aa20.25■□□□□ 0.83
COLCA2-202ENST00000526216 WASHC2AQ641Q2 1341 aa20.23■□□□□ 0.83
COLCA2-202ENST00000526216 LRPPRCP42704 1394 aaKnown RBP20.23■□□□□ 0.83
COLCA2-202ENST00000526216 KNDC1Q76NI1 1749 aa20.23■□□□□ 0.83
COLCA2-202ENST00000526216 ANKLE2Q86XL3 938 aa20.23■□□□□ 0.83
COLCA2-202ENST00000526216 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
COLCA2-202ENST00000526216 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
COLCA2-202ENST00000526216 DLC1Q96QB1 1528 aa20.22■□□□□ 0.83
COLCA2-202ENST00000526216 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
COLCA2-202ENST00000526216 QRICH2Q9H0J4 1663 aa20.22■□□□□ 0.83
COLCA2-202ENST00000526216 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
COLCA2-202ENST00000526216 KIF7Q2M1P5 1343 aa20.2■□□□□ 0.82
COLCA2-202ENST00000526216 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
COLCA2-202ENST00000526216 NPHP4O75161 1426 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-202ENST00000526216 BCANQ96GW7 911 aa20.2■□□□□ 0.82
COLCA2-202ENST00000526216 STK26Q9P289 416 aa20.2■□□□□ 0.82
COLCA2-202ENST00000526216 CPS1P31327 1500 aa20.19■□□□□ 0.82
COLCA2-202ENST00000526216 DISP3Q9P2K9 1392 aa20.19■□□□□ 0.82
COLCA2-202ENST00000526216 TECPR2O15040 1411 aa20.19■□□□□ 0.82
COLCA2-202ENST00000526216 HSPA2P54652 639 aa20.19■□□□□ 0.82
COLCA2-202ENST00000526216 TBX22Q9Y458 520 aa20.19■□□□□ 0.82
COLCA2-202ENST00000526216 ABCC11Q96J66 1382 aa20.18■□□□□ 0.82
COLCA2-202ENST00000526216 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
COLCA2-202ENST00000526216 XRN1Q8IZH2 1706 aaKnown RBP20.17■□□□□ 0.82
COLCA2-202ENST00000526216 SBNO2Q9Y2G9 1366 aa20.17■□□□□ 0.82
COLCA2-202ENST00000526216 STRCQ7RTU9 1775 aa20.15■□□□□ 0.82
COLCA2-202ENST00000526216 PLEKHH1Q9ULM0 1364 aa20.15■□□□□ 0.82
COLCA2-202ENST00000526216 TULP4Q9NRJ4 1543 aa20.13■□□□□ 0.81
COLCA2-202ENST00000526216 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
COLCA2-202ENST00000526216 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
COLCA2-202ENST00000526216 CHD2O14647 1828 aaKnown RBP20.11■□□□□ 0.81
COLCA2-202ENST00000526216 PIK3R4Q99570 1358 aa20.11■□□□□ 0.81
COLCA2-202ENST00000526216 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
COLCA2-202ENST00000526216 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
COLCA2-202ENST00000526216 TMF1P82094 1093 aa20.09■□□□□ 0.81
COLCA2-202ENST00000526216 SAFB2Q14151 953 aaKnown RBP eCLIP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms