RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 MAP3K7O43318 606 aa10.54□□□□□ -0.72
ATM-208ENST00000525537 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
ATM-208ENST00000525537 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
ATM-208ENST00000525537 SERPINA10Q9UK55 444 aa10.54□□□□□ -0.72
ATM-208ENST00000525537 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
ATM-208ENST00000525537 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
ATM-208ENST00000525537 CCDC9Q9Y3X0 531 aaKnown RBP10.53□□□□□ -0.72
ATM-208ENST00000525537 SPDYE5A6NIY4 337 aa10.52□□□□□ -0.73
ATM-208ENST00000525537 CCDC97Q96F63 343 aaPredicted RBP10.52□□□□□ -0.73
ATM-208ENST00000525537 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.52□□□□□ -0.73
ATM-208ENST00000525537 KCNK17Q96T54 332 aa10.51□□□□□ -0.73
ATM-208ENST00000525537 VPS9D1Q9Y2B5 631 aa10.51□□□□□ -0.73
ATM-208ENST00000525537 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
ATM-208ENST00000525537 ATP1B4Q9UN42 357 aaPredicted RBP10.5□□□□□ -0.73
ATM-208ENST00000525537 OATP04181 439 aa10.49□□□□□ -0.73
ATM-208ENST00000525537 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
ATM-208ENST00000525537 METTL3Q86U44 580 aaKnown RBP10.49□□□□□ -0.73
ATM-208ENST00000525537 TRAIPQ9BWF2 469 aa10.49□□□□□ -0.73
ATM-208ENST00000525537 TSR1Q2NL82 804 aaKnown RBP10.48□□□□□ -0.73
ATM-208ENST00000525537 BANK1Q8NDB2 785 aa10.48□□□□□ -0.73
ATM-208ENST00000525537 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
ATM-208ENST00000525537 COG6Q9Y2V7 657 aa10.48□□□□□ -0.73
ATM-208ENST00000525537 PCDHGA10Q9Y5H3 936 aa10.48□□□□□ -0.73
ATM-208ENST00000525537 CLK2P49760 499 aaKnown RBP10.47□□□□□ -0.73
ATM-208ENST00000525537 TYW1BQ6NUM6 668 aa10.47□□□□□ -0.73
ATM-208ENST00000525537 THSD4Q6ZMP0 1018 aa10.47□□□□□ -0.73
ATM-208ENST00000525537 KCNH8Q96L42 1107 aa10.47□□□□□ -0.73
ATM-208ENST00000525537 PXYLP1Q8TE99 480 aa10.45□□□□□ -0.74
ATM-208ENST00000525537 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
ATM-208ENST00000525537 DIXDC1Q155Q3 683 aa10.44□□□□□ -0.74
ATM-208ENST00000525537 KCTD17Q8N5Z5 321 aa10.44□□□□□ -0.74
ATM-208ENST00000525537 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
ATM-208ENST00000525537 RFC5P40937 340 aa10.43□□□□□ -0.74
ATM-208ENST00000525537 FAM161AQ3B820 660 aa10.43□□□□□ -0.74
ATM-208ENST00000525537 SLC4A5Q9BY07 1137 aa10.43□□□□□ -0.74
ATM-208ENST00000525537 ADGRG1Q9Y653 693 aa10.43□□□□□ -0.74
ATM-208ENST00000525537 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
ATM-208ENST00000525537 NLRP7Q8WX94 980 aa10.42□□□□□ -0.74
ATM-208ENST00000525537 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
ATM-208ENST00000525537 SNRKQ9NRH2 765 aa10.42□□□□□ -0.74
ATM-208ENST00000525537 TMEM259Q4ZIN3 620 aa10.41□□□□□ -0.74
ATM-208ENST00000525537 PADI6Q6TGC4 694 aa10.41□□□□□ -0.74
ATM-208ENST00000525537 JPH4Q96JJ6 628 aa10.41□□□□□ -0.74
ATM-208ENST00000525537 ZNF330Q9Y3S2 320 aaPredicted RBP10.41□□□□□ -0.74
ATM-208ENST00000525537 PPP2R2DQ66LE6 453 aa10.4□□□□□ -0.74
ATM-208ENST00000525537 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
ATM-208ENST00000525537 Q6ZNB5 142 aa10.39□□□□□ -0.75
ATM-208ENST00000525537 TTC13Q8NBP0 860 aa10.39□□□□□ -0.75
ATM-208ENST00000525537 WNT2BQ93097 391 aa10.38□□□□□ -0.75
ATM-208ENST00000525537 GOLGA8CPA6NN73 597 aa10.36□□□□□ -0.75
ATM-208ENST00000525537 C6orf132Q5T0Z8 1188 aa10.36□□□□□ -0.75
ATM-208ENST00000525537 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
ATM-208ENST00000525537 BCL2L12Q9HB09 334 aa10.36□□□□□ -0.75
ATM-208ENST00000525537 LIMD1Q9UGP4 676 aa10.36□□□□□ -0.75
ATM-208ENST00000525537 SOCS7O14512 581 aa10.35□□□□□ -0.75
ATM-208ENST00000525537 FOSBP53539 338 aa10.35□□□□□ -0.75
ATM-208ENST00000525537 TUSC1Q2TAM9 212 aa10.35□□□□□ -0.75
ATM-208ENST00000525537 RETREG2Q8NC44 543 aa10.35□□□□□ -0.75
ATM-208ENST00000525537 WWC1Q8IX03 1113 aa10.34□□□□□ -0.75
ATM-208ENST00000525537 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
ATM-208ENST00000525537 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
ATM-208ENST00000525537 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
ATM-208ENST00000525537 ZNF454Q8N9F8 522 aa10.33□□□□□ -0.76
ATM-208ENST00000525537 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
ATM-208ENST00000525537 ZBED2Q9BTP6 218 aa10.33□□□□□ -0.76
ATM-208ENST00000525537 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
ATM-208ENST00000525537 ITGBL1O95965 494 aaPredicted RBP10.32□□□□□ -0.76
ATM-208ENST00000525537 AEBP1Q8IUX7 1158 aa10.32□□□□□ -0.76
ATM-208ENST00000525537 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
ATM-208ENST00000525537 GDPD2Q9HCC8 539 aa10.32□□□□□ -0.76
ATM-208ENST00000525537 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
ATM-208ENST00000525537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
ATM-208ENST00000525537 SPTLC1O15269 473 aa10.3□□□□□ -0.76
ATM-208ENST00000525537 PRSS12P56730 875 aa10.3□□□□□ -0.76
ATM-208ENST00000525537 PRM3Q9NNZ6 103 aa10.3□□□□□ -0.76
ATM-208ENST00000525537 PTPREP23469 700 aa10.29□□□□□ -0.76
ATM-208ENST00000525537 CD46P15529 392 aa10.28□□□□□ -0.76
ATM-208ENST00000525537 CALR3Q96L12 384 aaKnown RBP10.28□□□□□ -0.76
ATM-208ENST00000525537 GJA5P36382 358 aa10.27□□□□□ -0.77
ATM-208ENST00000525537 RSBN1LQ6PCB5 846 aaPredicted RBP10.27□□□□□ -0.77
ATM-208ENST00000525537 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.77
ATM-208ENST00000525537 LCE2BO14633 110 aa10.26□□□□□ -0.77
ATM-208ENST00000525537 ABL2P42684 1182 aa10.26□□□□□ -0.77
ATM-208ENST00000525537 PDE4CQ08493 712 aa10.26□□□□□ -0.77
ATM-208ENST00000525537 IRF5Q13568 498 aa10.26□□□□□ -0.77
ATM-208ENST00000525537 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
ATM-208ENST00000525537 RCCD1A6NED2 376 aa10.25□□□□□ -0.77
ATM-208ENST00000525537 SULF1Q8IWU6 871 aa10.25□□□□□ -0.77
ATM-208ENST00000525537 GLMNQ92990 594 aa10.25□□□□□ -0.77
ATM-208ENST00000525537 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
ATM-208ENST00000525537 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
ATM-208ENST00000525537 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
ATM-208ENST00000525537 TBC1D2BQ9UPU7 963 aa10.24□□□□□ -0.77
ATM-208ENST00000525537 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
ATM-208ENST00000525537 POM121CA8CG34 1229 aa10.23□□□□□ -0.77
ATM-208ENST00000525537 LILRB3O75022 631 aa10.23□□□□□ -0.77
ATM-208ENST00000525537 EYA1Q99502 592 aa10.23□□□□□ -0.77
ATM-208ENST00000525537 QPCTQ16769 361 aa10.22□□□□□ -0.77
ATM-208ENST00000525537 CSPP1Q1MSJ5 1256 aa10.22□□□□□ -0.77
ATM-208ENST00000525537 TMCO4Q5TGY1 634 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms