RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PPP1R15AO75807 674 aaPredicted RBP27.99■■■□□ 2.07
CAPN1-203ENST00000525013 HDGFP51858 240 aaKnown RBP27.99■■■□□ 2.07
CAPN1-203ENST00000525013 RIMS2Q9UQ26 1411 aa27.98■■■□□ 2.07
CAPN1-203ENST00000525013 ZFYVE9O95405 1425 aa27.96■■■□□ 2.07
CAPN1-203ENST00000525013 TRIM52Q96A61 297 aa27.95■■■□□ 2.06
CAPN1-203ENST00000525013 SPHKAPQ2M3C7 1700 aa27.95■■■□□ 2.06
CAPN1-203ENST00000525013 HFM1A2PYH4 1435 aa27.94■■■□□ 2.06
CAPN1-203ENST00000525013 NUTM2DQ5VT03 806 aaPredicted RBP27.92■■■□□ 2.06
CAPN1-203ENST00000525013 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.92■■■□□ 2.06
CAPN1-203ENST00000525013 PLEKHG1Q9ULL1 1385 aa27.9■■■□□ 2.06
CAPN1-203ENST00000525013 KCNA6P17658 529 aa27.9■■■□□ 2.06
CAPN1-203ENST00000525013 XIRP1Q702N8 1843 aaKnown RBP27.88■■■□□ 2.05
CAPN1-203ENST00000525013 PROSER2Q86WR7 435 aaPredicted RBP27.85■■■□□ 2.05
CAPN1-203ENST00000525013 ALKQ9UM73 1620 aa27.85■■■□□ 2.05
CAPN1-203ENST00000525013 HSPA1LP34931 641 aa27.84■■■□□ 2.05
CAPN1-203ENST00000525013 ZNF326Q5BKZ1 582 aaKnown RBP27.83■■■□□ 2.05
CAPN1-203ENST00000525013 SLC4A1APQ9BWU0 796 aaKnown RBP27.83■■■□□ 2.05
CAPN1-203ENST00000525013 DISP3Q9P2K9 1392 aa27.83■■■□□ 2.05
CAPN1-203ENST00000525013 TMEM94Q12767 1356 aa27.82■■■□□ 2.04
CAPN1-203ENST00000525013 RBM33Q96EV2 1170 aaKnown RBP27.81■■■□□ 2.04
CAPN1-203ENST00000525013 TBX22Q9Y458 520 aa27.8■■■□□ 2.04
CAPN1-203ENST00000525013 CHD2O14647 1828 aaKnown RBP27.8■■■□□ 2.04
CAPN1-203ENST00000525013 CLTCL1P53675 1640 aa27.79■■■□□ 2.04
CAPN1-203ENST00000525013 NWD1Q149M9 1564 aa27.79■■■□□ 2.04
CAPN1-203ENST00000525013 TRPM2O94759 1503 aa27.79■■■□□ 2.04
CAPN1-203ENST00000525013 NKTRP30414 1462 aaKnown RBP27.77■■■□□ 2.04
CAPN1-203ENST00000525013 KIF1BO60333 1816 aa27.77■■■□□ 2.04
CAPN1-203ENST00000525013 ADAMTS13Q76LX8 1427 aa27.75■■■□□ 2.03
CAPN1-203ENST00000525013 DIP2AQ14689 1571 aa27.73■■■□□ 2.03
CAPN1-203ENST00000525013 FOXD1Q16676 465 aa27.69■■■□□ 2.02
CAPN1-203ENST00000525013 MSH6P52701 1360 aa27.68■■■□□ 2.02
CAPN1-203ENST00000525013 PIK3R4Q99570 1358 aa27.67■■■□□ 2.02
CAPN1-203ENST00000525013 C14orf37Q86TY3 774 aa27.66■■■□□ 2.02
CAPN1-203ENST00000525013 NEXMIFQ5QGS0 1516 aa27.65■■■□□ 2.02
CAPN1-203ENST00000525013 NRXN3Q9Y4C0 1643 aa27.64■■■□□ 2.02
CAPN1-203ENST00000525013 MPHOSPH9Q99550 1183 aa27.64■■■□□ 2.02
CAPN1-203ENST00000525013 AMOTL2Q9Y2J4 779 aa27.64■■■□□ 2.02
CAPN1-203ENST00000525013 SETBP1Q9Y6X0 1596 aa27.64■■■□□ 2.01
CAPN1-203ENST00000525013 SETD5Q9C0A6 1442 aa27.62■■■□□ 2.01
CAPN1-203ENST00000525013 FAM135BQ49AJ0 1406 aa27.6■■■□□ 2.01
CAPN1-203ENST00000525013 PTPRUQ92729 1446 aa27.59■■■□□ 2.01
CAPN1-203ENST00000525013 VGFO15240 615 aaPredicted RBP27.58■■■□□ 2.01
CAPN1-203ENST00000525013 ACIN1Q9UKV3 1341 aaKnown RBP27.58■■■□□ 2.01
CAPN1-203ENST00000525013 ROBO1Q9Y6N7 1651 aa27.57■■■□□ 2
CAPN1-203ENST00000525013 SLAIN2Q9P270 581 aa27.57■■■□□ 2
CAPN1-203ENST00000525013 NCOA3Q9Y6Q9 1424 aa27.57■■■□□ 2
CAPN1-203ENST00000525013 ILDR2Q71H61 639 aa27.56■■■□□ 2
CAPN1-203ENST00000525013 RPGRIP1LQ68CZ1 1315 aa27.56■■■□□ 2
CAPN1-203ENST00000525013 METP08581 1390 aa27.56■■■□□ 2
CAPN1-203ENST00000525013 CCDC144AA2RUR9 1427 aa27.56■■■□□ 2
CAPN1-203ENST00000525013 MED1Q15648 1581 aaPredicted RBP27.54■■■□□ 2
CAPN1-203ENST00000525013 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
CAPN1-203ENST00000525013 C19orf44Q9H6X5 657 aa27.53■■■□□ 2
CAPN1-203ENST00000525013 PPLO60437 1756 aa27.53■■■□□ 2
CAPN1-203ENST00000525013 ATF3P18847 181 aa27.52■■■□□ 2
CAPN1-203ENST00000525013 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.52■■■□□ 2
CAPN1-203ENST00000525013 RAB3GAP2Q9H2M9 1393 aa27.51■■□□□ 1.99
CAPN1-203ENST00000525013 RGL3Q3MIN7 710 aa27.51■■□□□ 1.99
CAPN1-203ENST00000525013 CADPS2Q86UW7 1296 aa27.5■■□□□ 1.99
CAPN1-203ENST00000525013 PHF23Q9BUL5 403 aaPredicted RBP27.44■■□□□ 1.98
CAPN1-203ENST00000525013 SPATA31E1Q6ZUB1 1445 aa27.43■■□□□ 1.98
CAPN1-203ENST00000525013 SETD1AO15047 1707 aaKnown RBP27.43■■□□□ 1.98
CAPN1-203ENST00000525013 PHLPP1O60346 1717 aa27.42■■□□□ 1.98
CAPN1-203ENST00000525013 ADGRF5Q8IZF2 1346 aa27.4■■□□□ 1.98
CAPN1-203ENST00000525013 ANKRD30BQ9BXX2 1392 aa27.38■■□□□ 1.97
CAPN1-203ENST00000525013 DCCP43146 1447 aa27.38■■□□□ 1.97
CAPN1-203ENST00000525013 IFT172Q9UG01 1749 aa27.38■■□□□ 1.97
CAPN1-203ENST00000525013 ADGRL3Q9HAR2 1447 aa27.36■■□□□ 1.97
CAPN1-203ENST00000525013 NALCNQ8IZF0 1738 aa27.34■■□□□ 1.97
CAPN1-203ENST00000525013 ROBO2Q9HCK4 1378 aa27.34■■□□□ 1.97
CAPN1-203ENST00000525013 PTCH1Q13635 1447 aa27.33■■□□□ 1.97
CAPN1-203ENST00000525013 SOCS7O14512 581 aa27.32■■□□□ 1.96
CAPN1-203ENST00000525013 BRINP3Q76B58 766 aa27.32■■□□□ 1.96
CAPN1-203ENST00000525013 HRCP23327 699 aa27.3■■□□□ 1.96
CAPN1-203ENST00000525013 MST1RQ04912 1400 aa27.3■■□□□ 1.96
CAPN1-203ENST00000525013 COL16A1Q07092 1604 aaPredicted RBP27.3■■□□□ 1.96
CAPN1-203ENST00000525013 STK26Q9P289 416 aa27.29■■□□□ 1.96
CAPN1-203ENST00000525013 JCADQ9P266 1359 aa27.29■■□□□ 1.96
CAPN1-203ENST00000525013 AHDC1Q5TGY3 1603 aaPredicted RBP27.27■■□□□ 1.96
CAPN1-203ENST00000525013 PIK3C2GO75747 1445 aa27.26■■□□□ 1.95
CAPN1-203ENST00000525013 PRAG1Q86YV5 1406 aa27.26■■□□□ 1.95
CAPN1-203ENST00000525013 TMEM132EQ6IEE7 984 aa27.26■■□□□ 1.95
CAPN1-203ENST00000525013 ASXL1Q8IXJ9 1541 aa27.25■■□□□ 1.95
CAPN1-203ENST00000525013 LRPPRCP42704 1394 aaKnown RBP27.22■■□□□ 1.95
CAPN1-203ENST00000525013 WAPLQ7Z5K2 1190 aa27.19■■□□□ 1.94
CAPN1-203ENST00000525013 C14orf93Q9H972 538 aaKnown RBP27.19■■□□□ 1.94
CAPN1-203ENST00000525013 RGS17Q9UGC6 210 aaPredicted RBP27.19■■□□□ 1.94
CAPN1-203ENST00000525013 MYOM2P54296 1465 aa27.19■■□□□ 1.94
CAPN1-203ENST00000525013 C1orf167Q5SNV9 1468 aa27.19■■□□□ 1.94
CAPN1-203ENST00000525013 CFAP70Q5T0N1 1121 aa27.18■■□□□ 1.94
CAPN1-203ENST00000525013 NHSL1Q5SYE7 1610 aa27.18■■□□□ 1.94
CAPN1-203ENST00000525013 DDX17Q92841 729 aaKnown RBP27.17■■□□□ 1.94
CAPN1-203ENST00000525013 ABCC11Q96J66 1382 aa27.17■■□□□ 1.94
CAPN1-203ENST00000525013 NRXN1Q9ULB1 1477 aa27.17■■□□□ 1.94
CAPN1-203ENST00000525013 TECPR2O15040 1411 aa27.16■■□□□ 1.94
CAPN1-203ENST00000525013 YTHDC2Q9H6S0 1430 aaKnown RBP27.16■■□□□ 1.94
CAPN1-203ENST00000525013 KNDC1Q76NI1 1749 aa27.16■■□□□ 1.94
CAPN1-203ENST00000525013 SPATA31A6Q5VVP1 1343 aa27.16■■□□□ 1.94
CAPN1-203ENST00000525013 SHPRHQ149N8 1683 aa27.15■■□□□ 1.94
CAPN1-203ENST00000525013 KDM2AQ9Y2K7 1162 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms