RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 MYBBP1AQ9BQG0 1328 aaKnown RBP21.6■■□□□ 1.05
BEST1-203ENST00000524877 RAPGEF6Q8TEU7 1601 aa21.6■■□□□ 1.05
BEST1-203ENST00000524877 WDR7Q9Y4E6 1490 aa21.6■■□□□ 1.05
BEST1-203ENST00000524877 DCAF8L1A6NGE4 600 aa21.59■■□□□ 1.05
BEST1-203ENST00000524877 FGD1P98174 961 aa21.59■■□□□ 1.05
BEST1-203ENST00000524877 SUPT16HQ9Y5B9 1047 aaKnown RBP21.59■■□□□ 1.05
BEST1-203ENST00000524877 AMER1Q5JTC6 1135 aaPredicted RBP21.59■■□□□ 1.05
BEST1-203ENST00000524877 GORABQ5T7V8 394 aa21.59■■□□□ 1.05
BEST1-203ENST00000524877 BECN1Q14457 450 aa21.58■■□□□ 1.05
BEST1-203ENST00000524877 DEKP35659 375 aaKnown RBP21.58■■□□□ 1.04
BEST1-203ENST00000524877 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.57■■□□□ 1.04
BEST1-203ENST00000524877 SMG6Q86US8 1419 aaKnown RBP21.56■■□□□ 1.04
BEST1-203ENST00000524877 ANKRD30BQ9BXX2 1392 aa21.56■■□□□ 1.04
BEST1-203ENST00000524877 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
BEST1-203ENST00000524877 ITPRIPQ8IWB1 547 aa21.55■■□□□ 1.04
BEST1-203ENST00000524877 PMFBP1Q8TBY8 1022 aa21.55■■□□□ 1.04
BEST1-203ENST00000524877 SMC4Q9NTJ3 1288 aa21.55■■□□□ 1.04
BEST1-203ENST00000524877 ISY1Q9ULR0 285 aaKnown RBP21.54■■□□□ 1.04
BEST1-203ENST00000524877 STRN4Q9NRL3 753 aa21.52■■□□□ 1.04
BEST1-203ENST00000524877 RTEL1-TNFRSF6BF6WH68 1400 aa21.52■■□□□ 1.04
BEST1-203ENST00000524877 CEBPAP49715 358 aaPredicted RBP21.52■■□□□ 1.04
BEST1-203ENST00000524877 SLC4A10Q6U841 1118 aa21.52■■□□□ 1.04
BEST1-203ENST00000524877 CDK19Q9BWU1 502 aa21.51■■□□□ 1.03
BEST1-203ENST00000524877 CFAP44Q96MT7 982 aa21.51■■□□□ 1.03
BEST1-203ENST00000524877 ZNF692Q9BU19 519 aaPredicted RBP21.51■■□□□ 1.03
BEST1-203ENST00000524877 PTPN23Q9H3S7 1636 aa21.5■■□□□ 1.03
BEST1-203ENST00000524877 GPATCH3Q96I76 525 aa21.5■■□□□ 1.03
BEST1-203ENST00000524877 PODXL2Q9NZ53 605 aa21.5■■□□□ 1.03
BEST1-203ENST00000524877 NAP1L2Q9ULW6 460 aaPredicted RBP21.5■■□□□ 1.03
BEST1-203ENST00000524877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.03
BEST1-203ENST00000524877 HMMRO75330 724 aa21.48■■□□□ 1.03
BEST1-203ENST00000524877 KLHL34Q8N239 644 aa21.48■■□□□ 1.03
BEST1-203ENST00000524877 PLCH2O75038 1416 aa21.48■■□□□ 1.03
BEST1-203ENST00000524877 CTTNBP2Q8WZ74 1663 aa21.48■■□□□ 1.03
BEST1-203ENST00000524877 DDRGK1Q96HY6 314 aa21.48■■□□□ 1.03
BEST1-203ENST00000524877 RGS3P49796 1198 aa21.47■■□□□ 1.03
BEST1-203ENST00000524877 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
BEST1-203ENST00000524877 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
BEST1-203ENST00000524877 APBB1O00213 710 aa21.47■■□□□ 1.03
BEST1-203ENST00000524877 MCCP23508 829 aa21.47■■□□□ 1.03
BEST1-203ENST00000524877 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
BEST1-203ENST00000524877 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
BEST1-203ENST00000524877 FRAT2O75474 233 aaPredicted RBP21.46■■□□□ 1.03
BEST1-203ENST00000524877 RRP7AQ9Y3A4 280 aaKnown RBP21.46■■□□□ 1.03
BEST1-203ENST00000524877 KIAA0556O60303 1618 aa21.46■■□□□ 1.03
BEST1-203ENST00000524877 ATP10BO94823 1461 aa21.45■■□□□ 1.03
BEST1-203ENST00000524877 NEXNQ0ZGT2 675 aa21.45■■□□□ 1.02
BEST1-203ENST00000524877 TNRQ92752 1358 aa21.45■■□□□ 1.02
BEST1-203ENST00000524877 DHX29Q7Z478 1369 aaKnown RBP21.45■■□□□ 1.02
BEST1-203ENST00000524877 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
BEST1-203ENST00000524877 TAOK2Q9UL54 1235 aa21.43■■□□□ 1.02
BEST1-203ENST00000524877 ZNF518AQ6AHZ1 1483 aa21.43■■□□□ 1.02
BEST1-203ENST00000524877 FBXO31Q5XUX0 539 aaPredicted RBP21.42■■□□□ 1.02
BEST1-203ENST00000524877 WASHC2AQ641Q2 1341 aa21.42■■□□□ 1.02
BEST1-203ENST00000524877 ABCC5O15440 1437 aa21.42■■□□□ 1.02
BEST1-203ENST00000524877 TOM1L2Q6ZVM7 507 aa21.42■■□□□ 1.02
BEST1-203ENST00000524877 NGEFQ8N5V2 710 aa21.42■■□□□ 1.02
BEST1-203ENST00000524877 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
BEST1-203ENST00000524877 PPP4R2Q9NY27 417 aa21.42■■□□□ 1.02
BEST1-203ENST00000524877 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
BEST1-203ENST00000524877 TATP17735 454 aaPredicted RBP21.42■■□□□ 1.02
BEST1-203ENST00000524877 EIF2S2P20042 333 aaKnown RBP21.42■■□□□ 1.02
BEST1-203ENST00000524877 RCAN3Q9UKA8 241 aa21.42■■□□□ 1.02
BEST1-203ENST00000524877 PLEKHO1Q53GL0 409 aaPredicted RBP21.41■■□□□ 1.02
BEST1-203ENST00000524877 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
BEST1-203ENST00000524877 DDX58O95786 925 aaKnown RBP21.41■■□□□ 1.02
BEST1-203ENST00000524877 RWDD1Q9H446 243 aaPredicted RBP21.4■■□□□ 1.02
BEST1-203ENST00000524877 PRDM11Q9NQV5 511 aa21.4■■□□□ 1.02
BEST1-203ENST00000524877 PDE3BQ13370 1112 aa21.4■■□□□ 1.02
BEST1-203ENST00000524877 KIAA1211Q6ZU35 1233 aa21.39■■□□□ 1.02
BEST1-203ENST00000524877 ZRSR1Q15695 479 aaKnown RBP21.39■■□□□ 1.01
BEST1-203ENST00000524877 FAM135AQ9P2D6 1515 aa21.39■■□□□ 1.01
BEST1-203ENST00000524877 NUP160Q12769 1436 aa21.38■■□□□ 1.01
BEST1-203ENST00000524877 GOLGA6L22H0YM25 854 aa21.38■■□□□ 1.01
BEST1-203ENST00000524877 CABP1Q9NZU7 370 aa21.37■■□□□ 1.01
BEST1-203ENST00000524877 RIPK4P57078 832 aa21.37■■□□□ 1.01
BEST1-203ENST00000524877 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
BEST1-203ENST00000524877 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
BEST1-203ENST00000524877 ITSN2Q9NZM3 1697 aa21.36■■□□□ 1.01
BEST1-203ENST00000524877 VSIG10Q8N0Z9 540 aa21.36■■□□□ 1.01
BEST1-203ENST00000524877 HMGB2P26583 209 aaKnown RBP21.36■■□□□ 1.01
BEST1-203ENST00000524877 PKNOX2Q96KN3 472 aa21.34■■□□□ 1.01
BEST1-203ENST00000524877 HMOX1P09601 288 aa21.34■■□□□ 1.01
BEST1-203ENST00000524877 AMOTL2Q9Y2J4 779 aa21.34■■□□□ 1.01
BEST1-203ENST00000524877 GAS2L2Q8NHY3 880 aa21.34■■□□□ 1.01
BEST1-203ENST00000524877 TULP1O00294 542 aaPredicted RBP21.34■■□□□ 1.01
BEST1-203ENST00000524877 TSPYL4Q9UJ04 414 aa21.33■■□□□ 1.01
BEST1-203ENST00000524877 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1.01
BEST1-203ENST00000524877 KDM5BQ9UGL1 1544 aa21.33■■□□□ 1
BEST1-203ENST00000524877 XPCQ01831 940 aaPredicted RBP21.33■■□□□ 1
BEST1-203ENST00000524877 SPG7Q9UQ90 795 aa21.33■■□□□ 1
BEST1-203ENST00000524877 A2MP01023 1474 aa21.32■■□□□ 1
BEST1-203ENST00000524877 E9PSI1 815 aa21.32■■□□□ 1
BEST1-203ENST00000524877 RUNDC1Q96C34 613 aa21.32■■□□□ 1
BEST1-203ENST00000524877 NUP153P49790 1475 aaKnown RBP21.32■■□□□ 1
BEST1-203ENST00000524877 GPATCH8Q9UKJ3 1502 aaKnown RBP21.32■■□□□ 1
BEST1-203ENST00000524877 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
BEST1-203ENST00000524877 TOM1O60784 492 aa21.31■■□□□ 1
BEST1-203ENST00000524877 NUDT16Q96DE0 195 aaKnown RBP21.3■■□□□ 1
BEST1-203ENST00000524877 KCNH5Q8NCM2 988 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms