RNA–Protein interactions for RNA: ENST00000521986.5

PTK2-238, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 2,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-238	ENST00000521986	MAGI2	Q86UL8	1455 aa		11.18	□□□□□ -0.62
PTK2-238	ENST00000521986	RNF17	Q9BXT8	1623 aa	Known RBP	11.18	□□□□□ -0.62
PTK2-238	ENST00000521986	FANCA	O15360	1455 aa		11.18	□□□□□ -0.62
PTK2-238	ENST00000521986	CD109	Q6YHK3	1445 aa		11.18	□□□□□ -0.62
PTK2-238	ENST00000521986	FAM69C	Q0P6D2	419 aa		11.17	□□□□□ -0.62
PTK2-238	ENST00000521986	SLC4A3	P48751	1232 aa		11.17	□□□□□ -0.62
PTK2-238	ENST00000521986	ATP10A	O60312	1499 aa		11.17	□□□□□ -0.62
PTK2-238	ENST00000521986	SCAPER	Q9BY12	1400 aa		11.16	□□□□□ -0.62
PTK2-238	ENST00000521986	GSE1	Q14687	1217 aa		11.16	□□□□□ -0.62
PTK2-238	ENST00000521986	NFKBIB	Q15653	356 aa		11.16	□□□□□ -0.62
PTK2-238	ENST00000521986	TMF1	P82094	1093 aa		11.16	□□□□□ -0.62
PTK2-238	ENST00000521986	SPAG9	O60271	1321 aa	Known RBP	11.15	□□□□□ -0.62
PTK2-238	ENST00000521986	C20orf194	Q5TEA3	1177 aa		11.15	□□□□□ -0.62
PTK2-238	ENST00000521986	BRPF3	Q9ULD4	1205 aa		11.15	□□□□□ -0.62
PTK2-238	ENST00000521986	MADD	Q8WXG6	1647 aa		11.15	□□□□□ -0.63
PTK2-238	ENST00000521986	ZMYM4	Q5VZL5	1548 aa		11.14	□□□□□ -0.63
PTK2-238	ENST00000521986	RAPGEF3	O95398	923 aa		11.14	□□□□□ -0.63
PTK2-238	ENST00000521986	ABCA9	Q8IUA7	1624 aa		11.14	□□□□□ -0.63
PTK2-238	ENST00000521986	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.13	□□□□□ -0.63
PTK2-238	ENST00000521986	DAXX	Q9UER7	740 aa	Predicted RBP	11.13	□□□□□ -0.63
PTK2-238	ENST00000521986	ABCC1	P33527	1531 aa		11.13	□□□□□ -0.63
PTK2-238	ENST00000521986	ADAMTS8	Q9UP79	889 aa		11.13	□□□□□ -0.63
PTK2-238	ENST00000521986	ADGRL1	O94910	1474 aa		11.13	□□□□□ -0.63
PTK2-238	ENST00000521986	IQGAP1	P46940	1657 aa		11.13	□□□□□ -0.63
PTK2-238	ENST00000521986	KDM2B	Q8NHM5	1336 aa		11.12	□□□□□ -0.63
PTK2-238	ENST00000521986	INSR	P06213	1382 aa		11.12	□□□□□ -0.63
PTK2-238	ENST00000521986	FRAT1	Q92837	279 aa	Predicted RBP	11.11	□□□□□ -0.63
PTK2-238	ENST00000521986	PLEKHH1	Q9ULM0	1364 aa		11.11	□□□□□ -0.63
PTK2-238	ENST00000521986	PPP2R1A	P30153	589 aa		11.1	□□□□□ -0.63
PTK2-238	ENST00000521986	CLTCL1	P53675	1640 aa		11.1	□□□□□ -0.63
PTK2-238	ENST00000521986	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.1	□□□□□ -0.63
PTK2-238	ENST00000521986	ARAP3	Q8WWN8	1544 aa		11.1	□□□□□ -0.63
PTK2-238	ENST00000521986	SPHKAP	Q2M3C7	1700 aa		11.09	□□□□□ -0.63
PTK2-238	ENST00000521986	FAM161A	Q3B820	660 aa		11.09	□□□□□ -0.63
PTK2-238	ENST00000521986	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.09	□□□□□ -0.63
PTK2-238	ENST00000521986	TRPM2	O94759	1503 aa		11.09	□□□□□ -0.63
PTK2-238	ENST00000521986	C8orf34	Q49A92	452 aa		11.09	□□□□□ -0.63
PTK2-238	ENST00000521986	KNSTRN	Q9Y448	316 aa		11.09	□□□□□ -0.63
PTK2-238	ENST00000521986	CEP152	O94986	1710 aa		11.08	□□□□□ -0.64
PTK2-238	ENST00000521986	MYOM1	P52179	1685 aa		11.08	□□□□□ -0.64
PTK2-238	ENST00000521986	ZFYVE16	Q7Z3T8	1539 aa		11.08	□□□□□ -0.64
PTK2-238	ENST00000521986	SYNM	O15061	1565 aa		11.08	□□□□□ -0.64
PTK2-238	ENST00000521986	SCAF11	Q99590	1463 aa	Known RBP	11.07	□□□□□ -0.64
PTK2-238	ENST00000521986	KIF3B	O15066	747 aa		11.06	□□□□□ -0.64
PTK2-238	ENST00000521986	WDR43	Q15061	677 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
PTK2-238	ENST00000521986	DUSP27	Q5VZP5	1158 aa		11.06	□□□□□ -0.64
PTK2-238	ENST00000521986	ASXL1	Q8IXJ9	1541 aa		11.06	□□□□□ -0.64
PTK2-238	ENST00000521986	FRAT2	O75474	233 aa	Predicted RBP	11.06	□□□□□ -0.64
PTK2-238	ENST00000521986	PTPRT	O14522	1441 aa		11.06	□□□□□ -0.64
PTK2-238	ENST00000521986	RGS3	P49796	1198 aa		11.05	□□□□□ -0.64
PTK2-238	ENST00000521986	ZNF521	Q96K83	1311 aa		11.05	□□□□□ -0.64
PTK2-238	ENST00000521986	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.05	□□□□□ -0.64
PTK2-238	ENST00000521986	DEPDC5	O75140	1603 aa		11.04	□□□□□ -0.64
PTK2-238	ENST00000521986	CCDC146	Q8IYE0	955 aa		11.04	□□□□□ -0.64
PTK2-238	ENST00000521986	UGGT1	Q9NYU2	1555 aa		11.04	□□□□□ -0.64
PTK2-238	ENST00000521986	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.04	□□□□□ -0.64
PTK2-238	ENST00000521986	TET3	O43151	1660 aa		11.04	□□□□□ -0.64
PTK2-238	ENST00000521986	GOLGA2	Q08379	1002 aa		11.03	□□□□□ -0.64
PTK2-238	ENST00000521986	PIK3C2G	O75747	1445 aa		11.02	□□□□□ -0.64
PTK2-238	ENST00000521986	POGZ	Q7Z3K3	1410 aa		11.02	□□□□□ -0.64
PTK2-238	ENST00000521986	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.02	□□□□□ -0.65
PTK2-238	ENST00000521986	ZNF518A	Q6AHZ1	1483 aa		11.02	□□□□□ -0.65
PTK2-238	ENST00000521986	ATP7A	Q04656	1500 aa		11.02	□□□□□ -0.65
PTK2-238	ENST00000521986	KDM5A	P29375	1690 aa	Known RBP	11.02	□□□□□ -0.65
PTK2-238	ENST00000521986	CDCA8	Q53HL2	280 aa		11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	CFAP70	Q5T0N1	1121 aa		11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	GGT6	Q6P531	493 aa		11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	ABCA6	Q8N139	1617 aa		11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	VWDE	Q8N2E2	1590 aa		11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	DIP2B	Q9P265	1576 aa		11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	INO80	Q9ULG1	1556 aa	Predicted RBP	11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	NEO1	Q92859	1461 aa		11.01	□□□□□ -0.65
PTK2-238	ENST00000521986	ERVK-7	P63135	1459 aa		11	□□□□□ -0.65
PTK2-238	ENST00000521986	EIF5B	O60841	1220 aa	Known RBP	11	□□□□□ -0.65
PTK2-238	ENST00000521986	SLFN5	Q08AF3	891 aa		11	□□□□□ -0.65
PTK2-238	ENST00000521986	ADGRF5	Q8IZF2	1346 aa		11	□□□□□ -0.65
PTK2-238	ENST00000521986	MROH1	Q8NDA8	1641 aa		11	□□□□□ -0.65
PTK2-238	ENST00000521986	EIF3A	Q14152	1382 aa	Known RBP	11	□□□□□ -0.65
PTK2-238	ENST00000521986	APAF1	O14727	1248 aa		10.99	□□□□□ -0.65
PTK2-238	ENST00000521986	DMRT2	Q9Y5R5	561 aa		10.99	□□□□□ -0.65
PTK2-238	ENST00000521986	GLI2	P10070	1586 aa		10.99	□□□□□ -0.65
PTK2-238	ENST00000521986	MAP3K4	Q9Y6R4	1608 aa		10.99	□□□□□ -0.65
PTK2-238	ENST00000521986	CARD14	Q9BXL6	1004 aa		10.99	□□□□□ -0.65
PTK2-238	ENST00000521986	KIAA1210	Q9ULL0	1709 aa		10.99	□□□□□ -0.65
PTK2-238	ENST00000521986	NPC1L1	Q9UHC9	1359 aa		10.99	□□□□□ -0.65
PTK2-238	ENST00000521986	KANK1	Q14678	1352 aa		10.98	□□□□□ -0.65
PTK2-238	ENST00000521986	YEATS2	Q9ULM3	1422 aa		10.98	□□□□□ -0.65
PTK2-238	ENST00000521986	MROH2A	A6NES4	1674 aa		10.98	□□□□□ -0.65
PTK2-238	ENST00000521986	BCAR3	O75815	825 aa		10.97	□□□□□ -0.65
PTK2-238	ENST00000521986	TRH	P20396	242 aa	Predicted RBP	10.97	□□□□□ -0.65
PTK2-238	ENST00000521986	TRMT2A	Q8IZ69	625 aa	Known RBP	10.97	□□□□□ -0.65
PTK2-238	ENST00000521986	IGHD	P01880	384 aa		10.97	□□□□□ -0.65
PTK2-238	ENST00000521986	KIDINS220	Q9ULH0	1771 aa		10.97	□□□□□ -0.65
PTK2-238	ENST00000521986	MLH3	Q9UHC1	1453 aa		10.97	□□□□□ -0.65
PTK2-238	ENST00000521986	TSPOAP1	O95153	1857 aa		10.96	□□□□□ -0.65
PTK2-238	ENST00000521986	STAC3	Q96MF2	364 aa		10.96	□□□□□ -0.65
PTK2-238	ENST00000521986	USP19	O94966	1318 aa		10.96	□□□□□ -0.65
PTK2-238	ENST00000521986	MYOM2	P54296	1465 aa		10.96	□□□□□ -0.65
PTK2-238	ENST00000521986	FAM43A	Q8N2R8	423 aa		10.96	□□□□□ -0.66
PTK2-238	ENST00000521986	NKTR	P30414	1462 aa	Known RBP	10.96	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms