RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 KCNA6P17658 529 aa39.27■■■■□ 3.88
LAPTM4B-203ENST00000521545 RIMS2Q9UQ26 1411 aa39.27■■■■□ 3.88
LAPTM4B-203ENST00000521545 TMEM131LA2VDJ0 1609 aa39.26■■■■□ 3.88
LAPTM4B-203ENST00000521545 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.25■■■■□ 3.87
LAPTM4B-203ENST00000521545 MYO5BQ9ULV0 1848 aa39.25■■■■□ 3.87
LAPTM4B-203ENST00000521545 ZFYVE9O95405 1425 aa39.24■■■■□ 3.87
LAPTM4B-203ENST00000521545 SENP3Q9H4L4 574 aaPredicted RBP39.22■■■■□ 3.87
LAPTM4B-203ENST00000521545 ALKQ9UM73 1620 aa39.21■■■■□ 3.87
LAPTM4B-203ENST00000521545 PLEKHG1Q9ULL1 1385 aa39.21■■■■□ 3.87
LAPTM4B-203ENST00000521545 PROSER2Q86WR7 435 aaPredicted RBP39.18■■■■□ 3.86
LAPTM4B-203ENST00000521545 NAIPQ13075 1403 aa39.17■■■■□ 3.86
LAPTM4B-203ENST00000521545 TMEM94Q12767 1356 aa39.14■■■■□ 3.86
LAPTM4B-203ENST00000521545 NUTM2DQ5VT03 806 aaPredicted RBP39.12■■■■□ 3.85
LAPTM4B-203ENST00000521545 XIRP1Q702N8 1843 aaKnown RBP39.12■■■■□ 3.85
LAPTM4B-203ENST00000521545 TBX22Q9Y458 520 aa39.1■■■■□ 3.85
LAPTM4B-203ENST00000521545 NKTRP30414 1462 aaKnown RBP39.07■■■■□ 3.85
LAPTM4B-203ENST00000521545 TRIM52Q96A61 297 aa39.07■■■■□ 3.85
LAPTM4B-203ENST00000521545 SPHKAPQ2M3C7 1700 aa39.06■■■■□ 3.84
LAPTM4B-203ENST00000521545 NWD1Q149M9 1564 aa39.05■■■■□ 3.84
LAPTM4B-203ENST00000521545 ILDR2Q71H61 639 aa39.05■■■■□ 3.84
LAPTM4B-203ENST00000521545 HFM1A2PYH4 1435 aa39.05■■■■□ 3.84
LAPTM4B-203ENST00000521545 RBM33Q96EV2 1170 aaKnown RBP39.04■■■■□ 3.84
LAPTM4B-203ENST00000521545 ZNF326Q5BKZ1 582 aaKnown RBP39.01■■■■□ 3.84
LAPTM4B-203ENST00000521545 CHD2O14647 1828 aaKnown RBP38.98■■■■□ 3.83
LAPTM4B-203ENST00000521545 ADAMTS13Q76LX8 1427 aa38.96■■■■□ 3.83
LAPTM4B-203ENST00000521545 MSH6P52701 1360 aa38.95■■■■□ 3.83
LAPTM4B-203ENST00000521545 DIP2AQ14689 1571 aa38.95■■■■□ 3.83
LAPTM4B-203ENST00000521545 FAM135BQ49AJ0 1406 aa38.93■■■■□ 3.82
LAPTM4B-203ENST00000521545 PIK3R4Q99570 1358 aa38.93■■■■□ 3.82
LAPTM4B-203ENST00000521545 SLC4A1APQ9BWU0 796 aaKnown RBP38.92■■■■□ 3.82
LAPTM4B-203ENST00000521545 TRPM2O94759 1503 aa38.9■■■■□ 3.82
LAPTM4B-203ENST00000521545 MED1Q15648 1581 aaPredicted RBP38.88■■■■□ 3.81
LAPTM4B-203ENST00000521545 CLTCL1P53675 1640 aa38.87■■■■□ 3.81
LAPTM4B-203ENST00000521545 C14orf37Q86TY3 774 aa38.86■■■■□ 3.81
LAPTM4B-203ENST00000521545 NCOA3Q9Y6Q9 1424 aa38.84■■■■□ 3.81
LAPTM4B-203ENST00000521545 AMOTL2Q9Y2J4 779 aa38.83■■■■□ 3.81
LAPTM4B-203ENST00000521545 SLAIN2Q9P270 581 aa38.82■■■■□ 3.8
LAPTM4B-203ENST00000521545 KIF1BO60333 1816 aa38.8■■■■□ 3.8
LAPTM4B-203ENST00000521545 SOCS7O14512 581 aa38.8■■■■□ 3.8
LAPTM4B-203ENST00000521545 PHF23Q9BUL5 403 aaPredicted RBP38.78■■■■□ 3.8
LAPTM4B-203ENST00000521545 SETBP1Q9Y6X0 1596 aa38.78■■■■□ 3.8
LAPTM4B-203ENST00000521545 ROBO1Q9Y6N7 1651 aa38.77■■■■□ 3.8
LAPTM4B-203ENST00000521545 C19orf44Q9H6X5 657 aa38.75■■■■□ 3.79
LAPTM4B-203ENST00000521545 PTPRUQ92729 1446 aa38.74■■■■□ 3.79
LAPTM4B-203ENST00000521545 NEXMIFQ5QGS0 1516 aa38.73■■■■□ 3.79
LAPTM4B-203ENST00000521545 NRXN3Q9Y4C0 1643 aa38.73■■■■□ 3.79
LAPTM4B-203ENST00000521545 VGFO15240 615 aaPredicted RBP38.71■■■■□ 3.79
LAPTM4B-203ENST00000521545 ATF3P18847 181 aa38.71■■■■□ 3.79
LAPTM4B-203ENST00000521545 CADPS2Q86UW7 1296 aa38.71■■■■□ 3.79
LAPTM4B-203ENST00000521545 RPGRIP1LQ68CZ1 1315 aa38.67■■■■□ 3.78
LAPTM4B-203ENST00000521545 FOXD1Q16676 465 aa38.67■■■■□ 3.78
LAPTM4B-203ENST00000521545 METP08581 1390 aa38.67■■■■□ 3.78
LAPTM4B-203ENST00000521545 MPHOSPH9Q99550 1183 aa38.64■■■■□ 3.78
LAPTM4B-203ENST00000521545 ACIN1Q9UKV3 1341 aaKnown RBP38.63■■■■□ 3.78
LAPTM4B-203ENST00000521545 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.63■■■■□ 3.78
LAPTM4B-203ENST00000521545 XRN1Q8IZH2 1706 aaKnown RBP38.6■■■■□ 3.77
LAPTM4B-203ENST00000521545 CCDC144AA2RUR9 1427 aa38.57■■■■□ 3.77
LAPTM4B-203ENST00000521545 PHLPP1O60346 1717 aa38.55■■■■□ 3.76
LAPTM4B-203ENST00000521545 SETD5Q9C0A6 1442 aa38.55■■■■□ 3.76
LAPTM4B-203ENST00000521545 DCCP43146 1447 aa38.53■■■■□ 3.76
LAPTM4B-203ENST00000521545 RGL3Q3MIN7 710 aa38.49■■■■□ 3.75
LAPTM4B-203ENST00000521545 JCADQ9P266 1359 aa38.48■■■■□ 3.75
LAPTM4B-203ENST00000521545 PPLO60437 1756 aa38.47■■■■□ 3.75
LAPTM4B-203ENST00000521545 BRINP3Q76B58 766 aa38.44■■■■□ 3.74
LAPTM4B-203ENST00000521545 ADGRL3Q9HAR2 1447 aa38.43■■■■□ 3.74
LAPTM4B-203ENST00000521545 COL16A1Q07092 1604 aaPredicted RBP38.4■■■■□ 3.74
LAPTM4B-203ENST00000521545 SPATA31E1Q6ZUB1 1445 aa38.39■■■■□ 3.74
LAPTM4B-203ENST00000521545 SETD1AO15047 1707 aaKnown RBP38.39■■■■□ 3.74
LAPTM4B-203ENST00000521545 RGS17Q9UGC6 210 aaPredicted RBP38.39■■■■□ 3.74
LAPTM4B-203ENST00000521545 ANKRD30BQ9BXX2 1392 aa38.39■■■■□ 3.74
LAPTM4B-203ENST00000521545 PTCH1Q13635 1447 aa38.38■■■■□ 3.74
LAPTM4B-203ENST00000521545 AHDC1Q5TGY3 1603 aaPredicted RBP38.38■■■■□ 3.74
LAPTM4B-203ENST00000521545 MST1RQ04912 1400 aa38.38■■■■□ 3.73
LAPTM4B-203ENST00000521545 ADGRF5Q8IZF2 1346 aa38.38■■■■□ 3.73
LAPTM4B-203ENST00000521545 RAB3GAP2Q9H2M9 1393 aa38.37■■■■□ 3.73
LAPTM4B-203ENST00000521545 ROBO2Q9HCK4 1378 aa38.35■■■■□ 3.73
LAPTM4B-203ENST00000521545 NALCNQ8IZF0 1738 aa38.32■■■■□ 3.72
LAPTM4B-203ENST00000521545 ASXL1Q8IXJ9 1541 aa38.31■■■■□ 3.72
LAPTM4B-203ENST00000521545 SPATA31A6Q5VVP1 1343 aa38.31■■■■□ 3.72
LAPTM4B-203ENST00000521545 PRAG1Q86YV5 1406 aa38.29■■■■□ 3.72
LAPTM4B-203ENST00000521545 IFT172Q9UG01 1749 aa38.25■■■■□ 3.71
LAPTM4B-203ENST00000521545 MEX3CQ5U5Q3 659 aaKnown RBP38.23■■■■□ 3.71
LAPTM4B-203ENST00000521545 STK26Q9P289 416 aa38.23■■■■□ 3.71
LAPTM4B-203ENST00000521545 POTEAQ6S8J7 498 aa38.21■■■■□ 3.71
LAPTM4B-203ENST00000521545 LRRC59Q96AG4 307 aaKnown RBP38.21■■■■□ 3.71
LAPTM4B-203ENST00000521545 C1orf167Q5SNV9 1468 aa38.21■■■■□ 3.71
LAPTM4B-203ENST00000521545 SHPRHQ149N8 1683 aa38.2■■■■□ 3.71
LAPTM4B-203ENST00000521545 TMEM132EQ6IEE7 984 aa38.18■■■■□ 3.7
LAPTM4B-203ENST00000521545 NHSL1Q5SYE7 1610 aa38.18■■■■□ 3.7
LAPTM4B-203ENST00000521545 PIK3C2GO75747 1445 aa38.18■■■■□ 3.7
LAPTM4B-203ENST00000521545 LRPPRCP42704 1394 aaKnown RBP38.17■■■■□ 3.7
LAPTM4B-203ENST00000521545 HRCP23327 699 aa38.16■■■■□ 3.7
LAPTM4B-203ENST00000521545 DDX17Q92841 729 aaKnown RBP38.16■■■■□ 3.7
LAPTM4B-203ENST00000521545 LRP6O75581 1613 aa38.14■■■■□ 3.7
LAPTM4B-203ENST00000521545 NUTM2BA6NNL0 878 aaPredicted RBP38.14■■■■□ 3.7
LAPTM4B-203ENST00000521545 NUTM2EB1AL46 878 aaPredicted RBP38.14■■■■□ 3.7
LAPTM4B-203ENST00000521545 NUTM2AQ8IVF1 878 aaPredicted RBP38.14■■■■□ 3.7
LAPTM4B-203ENST00000521545 ABCC11Q96J66 1382 aa38.14■■■■□ 3.7
LAPTM4B-203ENST00000521545 WAPLQ7Z5K2 1190 aa38.12■■■■□ 3.69
LAPTM4B-203ENST00000521545 ORAI2Q96SN7 254 aa38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms