RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
SNHG6-202ENST00000520619 NLRP7Q8WX94 980 aa9.32□□□□□ -0.92
SNHG6-202ENST00000520619 TSR3Q9UJK0 312 aaKnown RBP9.32□□□□□ -0.92
SNHG6-202ENST00000520619 HPS5Q9UPZ3 1129 aa9.31□□□□□ -0.92
SNHG6-202ENST00000520619 RNF40O75150 1001 aa9.3□□□□□ -0.92
SNHG6-202ENST00000520619 SLF2Q8IX21 1173 aa9.3□□□□□ -0.92
SNHG6-202ENST00000520619 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
SNHG6-202ENST00000520619 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
SNHG6-202ENST00000520619 PPP4CP60510 307 aa9.28□□□□□ -0.92
SNHG6-202ENST00000520619 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
SNHG6-202ENST00000520619 DAXXQ9UER7 740 aaPredicted RBP9.28□□□□□ -0.92
SNHG6-202ENST00000520619 AK7Q96M32 723 aa9.26□□□□□ -0.93
SNHG6-202ENST00000520619 MDM2Q00987 491 aaPredicted RBP9.25□□□□□ -0.93
SNHG6-202ENST00000520619 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
SNHG6-202ENST00000520619 TRIM66O15016 1216 aa9.24□□□□□ -0.93
SNHG6-202ENST00000520619 SLC10A3P09131 477 aa9.24□□□□□ -0.93
SNHG6-202ENST00000520619 NECTIN2Q92692 538 aa9.24□□□□□ -0.93
SNHG6-202ENST00000520619 AMHR2Q16671 573 aa9.23□□□□□ -0.93
SNHG6-202ENST00000520619 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
SNHG6-202ENST00000520619 CLCN1P35523 988 aa9.22□□□□□ -0.93
SNHG6-202ENST00000520619 APLP1P51693 650 aa9.22□□□□□ -0.93
SNHG6-202ENST00000520619 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
SNHG6-202ENST00000520619 TMUB1Q9BVT8 246 aa9.22□□□□□ -0.93
SNHG6-202ENST00000520619 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
SNHG6-202ENST00000520619 SULF1Q8IWU6 871 aa9.21□□□□□ -0.94
SNHG6-202ENST00000520619 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
SNHG6-202ENST00000520619 RSPH4AQ5TD94 716 aa9.2□□□□□ -0.94
SNHG6-202ENST00000520619 CFHP08603 1231 aa9.19□□□□□ -0.94
SNHG6-202ENST00000520619 TTLL12Q14166 644 aaPredicted RBP9.19□□□□□ -0.94
SNHG6-202ENST00000520619 RDH13Q8NBN7 331 aa9.19□□□□□ -0.94
SNHG6-202ENST00000520619 PRR14Q9BWN1 585 aa9.18□□□□□ -0.94
SNHG6-202ENST00000520619 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
SNHG6-202ENST00000520619 CD46P15529 392 aa9.17□□□□□ -0.94
SNHG6-202ENST00000520619 PDE4DQ08499 809 aa9.17□□□□□ -0.94
SNHG6-202ENST00000520619 KMT5BQ4FZB7 885 aa9.17□□□□□ -0.94
SNHG6-202ENST00000520619 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
SNHG6-202ENST00000520619 ACTN4O43707 911 aaKnown RBP9.16□□□□□ -0.94
SNHG6-202ENST00000520619 GCGRP47871 477 aa9.15□□□□□ -0.94
SNHG6-202ENST00000520619 GIGYF2Q6Y7W6 1299 aaKnown RBP9.15□□□□□ -0.94
SNHG6-202ENST00000520619 ITGBL1O95965 494 aaPredicted RBP9.14□□□□□ -0.95
SNHG6-202ENST00000520619 SSTR3P32745 418 aaPredicted RBP9.14□□□□□ -0.95
SNHG6-202ENST00000520619 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
SNHG6-202ENST00000520619 TJAP1Q5JTD0 557 aa9.13□□□□□ -0.95
SNHG6-202ENST00000520619 MTRQ99707 1265 aa9.13□□□□□ -0.95
SNHG6-202ENST00000520619 PRKCSHP14314 528 aaPredicted RBP9.12□□□□□ -0.95
SNHG6-202ENST00000520619 PCDHB3Q9Y5E6 796 aa9.12□□□□□ -0.95
SNHG6-202ENST00000520619 COPS2P61201 443 aa9.11□□□□□ -0.95
SNHG6-202ENST00000520619 FUT2Q10981 343 aa9.1□□□□□ -0.95
SNHG6-202ENST00000520619 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
SNHG6-202ENST00000520619 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
SNHG6-202ENST00000520619 MS4A1P11836 297 aa9.09□□□□□ -0.95
SNHG6-202ENST00000520619 KCNC4Q03721 635 aa9.09□□□□□ -0.95
SNHG6-202ENST00000520619 KDM4AO75164 1064 aa9.08□□□□□ -0.96
SNHG6-202ENST00000520619 PUS10Q3MIT2 529 aaKnown RBP9.08□□□□□ -0.96
SNHG6-202ENST00000520619 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
SNHG6-202ENST00000520619 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
SNHG6-202ENST00000520619 ATP6V1AP38606 617 aa9.07□□□□□ -0.96
SNHG6-202ENST00000520619 MORN1Q5T089 497 aa9.06□□□□□ -0.96
SNHG6-202ENST00000520619 BEGAINQ9BUH8 593 aa9.06□□□□□ -0.96
SNHG6-202ENST00000520619 GPBP1L1Q9HC44 474 aaPredicted RBP9.06□□□□□ -0.96
SNHG6-202ENST00000520619 ZPR1O75312 459 aa9.05□□□□□ -0.96
SNHG6-202ENST00000520619 USP46P62068 366 aa9.05□□□□□ -0.96
SNHG6-202ENST00000520619 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
SNHG6-202ENST00000520619 KDM4CQ9H3R0 1056 aa9.05□□□□□ -0.96
SNHG6-202ENST00000520619 NR1I2O75469 434 aa9.04□□□□□ -0.96
SNHG6-202ENST00000520619 GRIPAP1Q4V328 841 aa9.04□□□□□ -0.96
SNHG6-202ENST00000520619 SCUBE3Q8IX30 993 aa9.04□□□□□ -0.96
SNHG6-202ENST00000520619 HOXA2O43364 376 aa9.03□□□□□ -0.96
SNHG6-202ENST00000520619 SPIRE2Q8WWL2 714 aa9.03□□□□□ -0.96
SNHG6-202ENST00000520619 SLC27A5Q9Y2P5 690 aa9.03□□□□□ -0.96
SNHG6-202ENST00000520619 NKX2-3Q8TAU0 364 aa9.02□□□□□ -0.97
SNHG6-202ENST00000520619 TLL1O43897 1013 aa9.01□□□□□ -0.97
SNHG6-202ENST00000520619 HLA-CQ95604 372 aa9.01□□□□□ -0.97
SNHG6-202ENST00000520619 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
SNHG6-202ENST00000520619 BRPF1P55201 1214 aaPredicted RBP9□□□□□ -0.97
SNHG6-202ENST00000520619 NEUROD2Q15784 382 aa9□□□□□ -0.97
SNHG6-202ENST00000520619 A0A0G2JS52 829 aa8.99□□□□□ -0.97
SNHG6-202ENST00000520619 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
SNHG6-202ENST00000520619 NDUFV2P19404 249 aa8.98□□□□□ -0.97
SNHG6-202ENST00000520619 GUCA2AQ02747 115 aa8.98□□□□□ -0.97
SNHG6-202ENST00000520619 FAM117AQ9C073 453 aa8.98□□□□□ -0.97
SNHG6-202ENST00000520619 SALL2Q9Y467 1007 aaPredicted RBP8.98□□□□□ -0.97
SNHG6-202ENST00000520619 MOXD2PA6NHM9 499 aa8.97□□□□□ -0.97
SNHG6-202ENST00000520619 ADH1BP00325 375 aa8.97□□□□□ -0.97
SNHG6-202ENST00000520619 DIXDC1Q155Q3 683 aa8.97□□□□□ -0.97
SNHG6-202ENST00000520619 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
SNHG6-202ENST00000520619 SPSB2Q99619 263 aa8.97□□□□□ -0.97
SNHG6-202ENST00000520619 FMNL1O95466 1100 aaPredicted RBP8.96□□□□□ -0.98
SNHG6-202ENST00000520619 Q3C1V9 767 aa8.96□□□□□ -0.98
SNHG6-202ENST00000520619 RNF19BQ6ZMZ0 732 aa8.96□□□□□ -0.98
SNHG6-202ENST00000520619 FDX1P10109 184 aa8.95□□□□□ -0.98
SNHG6-202ENST00000520619 PPP1R18Q6NYC8 613 aa8.95□□□□□ -0.98
SNHG6-202ENST00000520619 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
SNHG6-202ENST00000520619 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
SNHG6-202ENST00000520619 PLEKHG3A1L390 1219 aa8.94□□□□□ -0.98
SNHG6-202ENST00000520619 GJA5P36382 358 aa8.94□□□□□ -0.98
SNHG6-202ENST00000520619 MYSM1Q5VVJ2 828 aa8.94□□□□□ -0.98
SNHG6-202ENST00000520619 RSBN1LQ6PCB5 846 aaPredicted RBP8.94□□□□□ -0.98
SNHG6-202ENST00000520619 SPTLC1O15269 473 aa8.93□□□□□ -0.98
SNHG6-202ENST00000520619 FAM160A2Q8N612 972 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms