RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 USP17L8P0C7I0 530 aa5.92□□□□□ -1.46
SREK1-208ENST00000520580 RTL5Q5HYW3 569 aaPredicted RBP5.92□□□□□ -1.46
SREK1-208ENST00000520580 CFAP70Q5T0N1 1121 aa5.92□□□□□ -1.46
SREK1-208ENST00000520580 NUTM2DQ5VT03 806 aaPredicted RBP5.92□□□□□ -1.46
SREK1-208ENST00000520580 TYW1BQ6NUM6 668 aa5.92□□□□□ -1.46
SREK1-208ENST00000520580 NUTM2AQ8IVF1 878 aaPredicted RBP5.92□□□□□ -1.46
SREK1-208ENST00000520580 PDE4CQ08493 712 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 CCDC27Q2M243 656 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 CDCA8Q53HL2 280 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 RSBN1LQ6PCB5 846 aaPredicted RBP5.91□□□□□ -1.46
SREK1-208ENST00000520580 ZNF710Q8N1W2 664 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 VAC14Q08AM6 782 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 KCNA1Q09470 495 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 LHX8Q68G74 356 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 NUTM1Q86Y26 1132 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 CABLES1Q8TDN4 633 aa5.91□□□□□ -1.46
SREK1-208ENST00000520580 L3MBTL3Q96JM7 780 aaPredicted RBP5.91□□□□□ -1.46
SREK1-208ENST00000520580 DDX11L8A8MPP1 907 aa5.9□□□□□ -1.46
SREK1-208ENST00000520580 HAX1O00165 279 aa5.9□□□□□ -1.46
SREK1-208ENST00000520580 C6orf132Q5T0Z8 1188 aa5.9□□□□□ -1.46
SREK1-208ENST00000520580 ATMINO43313 823 aaPredicted RBP5.89□□□□□ -1.47
SREK1-208ENST00000520580 SPTLC1O15269 473 aa5.89□□□□□ -1.47
SREK1-208ENST00000520580 LMOD1P29536 600 aaPredicted RBP5.89□□□□□ -1.47
SREK1-208ENST00000520580 PPP1R12CQ9BZL4 782 aa5.89□□□□□ -1.47
SREK1-208ENST00000520580 HMX1Q9NP08 348 aaPredicted RBP5.89□□□□□ -1.47
SREK1-208ENST00000520580 SHROOM4Q9ULL8 1493 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 PATL2C9JE40 543 aaKnown RBP5.88□□□□□ -1.47
SREK1-208ENST00000520580 LILRB3O75022 631 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 CD46P15529 392 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 RBM46Q8TBY0 533 aaKnown RBP5.88□□□□□ -1.47
SREK1-208ENST00000520580 GJD4Q96KN9 370 aaPredicted RBP5.88□□□□□ -1.47
SREK1-208ENST00000520580 USTQ9Y2C2 406 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 PALM3A6NDB9 673 aaPredicted RBP5.88□□□□□ -1.47
SREK1-208ENST00000520580 RCCD1A6NED2 376 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 SEC24BO95487 1268 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 IER5LQ5T953 404 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 TSC1Q92574 1164 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 COLQQ9Y215 455 aaPredicted RBP5.88□□□□□ -1.47
SREK1-208ENST00000520580 NDUFB9Q9Y6M9 179 aa5.88□□□□□ -1.47
SREK1-208ENST00000520580 SRPK2P78362 688 aaKnown RBP5.87□□□□□ -1.47
SREK1-208ENST00000520580 CDCA7LQ96GN5 454 aa5.87□□□□□ -1.47
SREK1-208ENST00000520580 CERKQ8TCT0 537 aa5.87□□□□□ -1.47
SREK1-208ENST00000520580 JPH4Q96JJ6 628 aa5.87□□□□□ -1.47
SREK1-208ENST00000520580 ZNF454Q8N9F8 522 aa5.86□□□□□ -1.47
SREK1-208ENST00000520580 SLC34A2O95436 690 aa5.86□□□□□ -1.47
SREK1-208ENST00000520580 PRSS12P56730 875 aa5.86□□□□□ -1.47
SREK1-208ENST00000520580 CTDSPL2Q05D32 466 aa5.86□□□□□ -1.47
SREK1-208ENST00000520580 ASTLQ6HA08 431 aaPredicted RBP5.86□□□□□ -1.47
SREK1-208ENST00000520580 SND1Q7KZF4 910 aaKnown RBP eCLIP5.86□□□□□ -1.47
SREK1-208ENST00000520580 TFIP11Q9UBB9 837 aaKnown RBP5.86□□□□□ -1.47
SREK1-208ENST00000520580 PCDHGA4Q9Y5G9 962 aa5.86□□□□□ -1.47
SREK1-208ENST00000520580 GPR37L1O60883 481 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 C3orf67Q6ZVT6 689 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 TTC13Q8NBP0 860 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 UCN2Q96RP3 112 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 ADAM33Q9BZ11 813 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 VRTNQ9H8Y1 702 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 FAM198AQ9UFP1 575 aa5.85□□□□□ -1.47
SREK1-208ENST00000520580 FOSBP53539 338 aa5.84□□□□□ -1.47
SREK1-208ENST00000520580 EPS8L1Q8TE68 723 aa5.84□□□□□ -1.47
SREK1-208ENST00000520580 ZDHHC16Q969W1 377 aa5.84□□□□□ -1.47
SREK1-208ENST00000520580 TMEM88BA6NKF7 163 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 GUCA2AQ02747 115 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 WASHC4Q2M389 1173 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 TUSC1Q2TAM9 212 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 SULF1Q8IWU6 871 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 RDH13Q8NBN7 331 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 LRRN4Q8WUT4 740 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 HLA-CQ95604 372 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 TRIM34Q9BYJ4 488 aa5.84□□□□□ -1.48
SREK1-208ENST00000520580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.83□□□□□ -1.48
SREK1-208ENST00000520580 C3orf80F5H4A9 247 aa5.83□□□□□ -1.48
SREK1-208ENST00000520580 PRR7Q8TB68 274 aa5.83□□□□□ -1.48
SREK1-208ENST00000520580 RBM27Q9P2N5 1060 aaKnown RBP5.83□□□□□ -1.48
SREK1-208ENST00000520580 SOCS7O14512 581 aa5.82□□□□□ -1.48
SREK1-208ENST00000520580 NUDT18Q6ZVK8 323 aa5.82□□□□□ -1.48
SREK1-208ENST00000520580 UNCXA6NJT0 531 aa5.82□□□□□ -1.48
SREK1-208ENST00000520580 EYA1Q99502 592 aa5.82□□□□□ -1.48
SREK1-208ENST00000520580 ALG2Q9H553 416 aa5.82□□□□□ -1.48
SREK1-208ENST00000520580 ZBTB3Q9H5J0 574 aa5.82□□□□□ -1.48
SREK1-208ENST00000520580 AMOTL2Q9Y2J4 779 aa5.82□□□□□ -1.48
SREK1-208ENST00000520580 KDM4AO75164 1064 aa5.81□□□□□ -1.48
SREK1-208ENST00000520580 EVX2Q03828 476 aa5.81□□□□□ -1.48
SREK1-208ENST00000520580 PELP1Q8IZL8 1130 aaKnown RBP5.81□□□□□ -1.48
SREK1-208ENST00000520580 TSKSQ9UJT2 592 aa5.81□□□□□ -1.48
SREK1-208ENST00000520580 SMAPO00193 183 aa5.8□□□□□ -1.48
SREK1-208ENST00000520580 NUDT7P0C024 238 aa5.8□□□□□ -1.48
SREK1-208ENST00000520580 KHSRPQ92945 711 aaKnown RBP eCLIP5.8□□□□□ -1.482e-10■■□□□ 13.8
SREK1-208ENST00000520580 PCDH10Q9P2E7 1040 aa5.8□□□□□ -1.48
SREK1-208ENST00000520580 PCDHGC3Q9UN70 934 aa5.8□□□□□ -1.48
SREK1-208ENST00000520580 KDM4FA0A1W2PPD8 638 aa5.8□□□□□ -1.48
SREK1-208ENST00000520580 COL9A1P20849 921 aa5.8□□□□□ -1.48
SREK1-208ENST00000520580 TBC1D9Q6ZT07 1266 aa5.8□□□□□ -1.48
SREK1-208ENST00000520580 MAFBQ9Y5Q3 323 aaPredicted RBP5.8□□□□□ -1.48
SREK1-208ENST00000520580 FDX1P10109 184 aa5.79□□□□□ -1.48
SREK1-208ENST00000520580 PRPF38BQ5VTL8 546 aaKnown RBP5.79□□□□□ -1.48
SREK1-208ENST00000520580 HOXA2O43364 376 aa5.79□□□□□ -1.48
SREK1-208ENST00000520580 PNMA3Q9UL41 463 aa5.79□□□□□ -1.48
SREK1-208ENST00000520580 POTEFA5A3E0 1075 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms