RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 NEO1Q92859 1461 aa34.77■■■■□ 3.16
COL13A1-213ENST00000520267 MYT1Q01538 1121 aa34.77■■■■□ 3.16
COL13A1-213ENST00000520267 ERICH6BQ5W0A0 696 aa34.76■■■■□ 3.15
COL13A1-213ENST00000520267 GGT6Q6P531 493 aa34.76■■■■□ 3.15
COL13A1-213ENST00000520267 ADGRF5Q8IZF2 1346 aa34.76■■■■□ 3.15
COL13A1-213ENST00000520267 CFAP65Q6ZU64 1925 aaKnown RBP34.75■■■■□ 3.15
COL13A1-213ENST00000520267 NUDCQ9Y266 331 aa34.74■■■■□ 3.15
COL13A1-213ENST00000520267 RAPGEF3O95398 923 aa34.73■■■■□ 3.15
COL13A1-213ENST00000520267 CFAP70Q5T0N1 1121 aa34.73■■■■□ 3.15
COL13A1-213ENST00000520267 NPATQ14207 1427 aa34.73■■■■□ 3.15
COL13A1-213ENST00000520267 ADGRB3O60242 1522 aa34.7■■■■□ 3.14
COL13A1-213ENST00000520267 EIF3AQ14152 1382 aaKnown RBP34.69■■■■□ 3.14
COL13A1-213ENST00000520267 ABCC3O15438 1527 aa34.67■■■■□ 3.14
COL13A1-213ENST00000520267 NRXN1Q9ULB1 1477 aa34.67■■■■□ 3.14
COL13A1-213ENST00000520267 SYNMO15061 1565 aa34.67■■■■□ 3.14
COL13A1-213ENST00000520267 CDCA8Q53HL2 280 aa34.66■■■■□ 3.14
COL13A1-213ENST00000520267 PPP4R2Q9NY27 417 aa34.65■■■■□ 3.14
COL13A1-213ENST00000520267 DIP2CQ9Y2E4 1556 aa34.64■■■■□ 3.14
COL13A1-213ENST00000520267 MYOM1P52179 1685 aa34.64■■■■□ 3.14
COL13A1-213ENST00000520267 RICTORQ6R327 1708 aa34.63■■■■□ 3.13
COL13A1-213ENST00000520267 CHGAP10645 457 aaKnown RBP34.63■■■■□ 3.13
COL13A1-213ENST00000520267 NOS1P29475 1434 aa34.62■■■■□ 3.13
COL13A1-213ENST00000520267 CAMSAP1Q5T5Y3 1602 aa34.61■■■■□ 3.13
COL13A1-213ENST00000520267 KDM5AP29375 1690 aaKnown RBP34.59■■■■□ 3.13
COL13A1-213ENST00000520267 PPLO60437 1756 aa34.59■■■■□ 3.13
COL13A1-213ENST00000520267 KNSTRNQ9Y448 316 aa34.58■■■■□ 3.13
COL13A1-213ENST00000520267 SIGLEC1Q9BZZ2 1709 aa34.57■■■■□ 3.12
COL13A1-213ENST00000520267 CYB5RLQ6IPT4 315 aa34.57■■■■□ 3.12
COL13A1-213ENST00000520267 RNF123Q5XPI4 1314 aa34.56■■■■□ 3.12
COL13A1-213ENST00000520267 ERVK-7P63135 1459 aa34.54■■■■□ 3.12
COL13A1-213ENST00000520267 AMER1Q5JTC6 1135 aaPredicted RBP34.54■■■■□ 3.12
COL13A1-213ENST00000520267 MYO3AQ8NEV4 1616 aa34.52■■■■□ 3.12
COL13A1-213ENST00000520267 SETBP1Q9Y6X0 1596 aa34.51■■■■□ 3.12
COL13A1-213ENST00000520267 GLI2P10070 1586 aa34.5■■■■□ 3.11
COL13A1-213ENST00000520267 SALL2Q9Y467 1007 aaPredicted RBP34.5■■■■□ 3.11
COL13A1-213ENST00000520267 ASXL1Q8IXJ9 1541 aa34.5■■■■□ 3.11
COL13A1-213ENST00000520267 PIK3C2GO75747 1445 aa34.49■■■■□ 3.11
COL13A1-213ENST00000520267 YEATS2Q9ULM3 1422 aa34.49■■■■□ 3.11
COL13A1-213ENST00000520267 BLMP54132 1417 aaPredicted RBP34.48■■■■□ 3.11
COL13A1-213ENST00000520267 INSRP06213 1382 aa34.48■■■■□ 3.11
COL13A1-213ENST00000520267 ZMYM4Q5VZL5 1548 aa34.48■■■■□ 3.11
COL13A1-213ENST00000520267 SLC24A1O60721 1099 aa34.47■■■■□ 3.11
COL13A1-213ENST00000520267 PPP2R1AP30153 589 aa34.47■■■■□ 3.11
COL13A1-213ENST00000520267 PIK3C2BO00750 1634 aa34.47■■■■□ 3.11
COL13A1-213ENST00000520267 B4GALNT3Q6L9W6 998 aa34.46■■■■□ 3.11
COL13A1-213ENST00000520267 RPGRIP1LQ68CZ1 1315 aa34.44■■■■□ 3.1
COL13A1-213ENST00000520267 RIMBP3CA6NJZ7 1639 aa34.44■■■■□ 3.1
COL13A1-213ENST00000520267 RIMBP3BA6NNM3 1639 aa34.44■■■■□ 3.1
COL13A1-213ENST00000520267 RIMBP3Q9UFD9 1639 aa34.44■■■■□ 3.1
COL13A1-213ENST00000520267 C14orf93Q9H972 538 aaKnown RBP34.44■■■■□ 3.1
COL13A1-213ENST00000520267 ZC3H13Q5T200 1668 aaKnown RBP34.43■■■■□ 3.1
COL13A1-213ENST00000520267 ADGRB1O14514 1584 aa34.41■■■■□ 3.1
COL13A1-213ENST00000520267 SBNO2Q9Y2G9 1366 aa34.41■■■■□ 3.1
COL13A1-213ENST00000520267 NPC1L1Q9UHC9 1359 aa34.4■■■■□ 3.1
COL13A1-213ENST00000520267 ARHGAP31Q2M1Z3 1444 aa34.4■■■■□ 3.1
COL13A1-213ENST00000520267 CENPJQ9HC77 1338 aaPredicted RBP34.4■■■■□ 3.1
COL13A1-213ENST00000520267 RBM19Q9Y4C8 960 aaKnown RBP34.39■■■■□ 3.1
COL13A1-213ENST00000520267 PDE3BQ13370 1112 aa34.39■■■■□ 3.1
COL13A1-213ENST00000520267 TRAK1Q9UPV9 953 aa34.39■■■■□ 3.1
COL13A1-213ENST00000520267 TMEM132EQ6IEE7 984 aa34.35■■■■□ 3.09
COL13A1-213ENST00000520267 ADAMTS8Q9UP79 889 aa34.35■■■■□ 3.09
COL13A1-213ENST00000520267 QRICH2Q9H0J4 1663 aa34.35■■■■□ 3.09
COL13A1-213ENST00000520267 NEXMIFQ5QGS0 1516 aa34.35■■■■□ 3.09
COL13A1-213ENST00000520267 FAM69CQ0P6D2 419 aa34.34■■■■□ 3.09
COL13A1-213ENST00000520267 DIP2BQ9P265 1576 aa34.34■■■■□ 3.09
COL13A1-213ENST00000520267 CDCA7LQ96GN5 454 aa34.33■■■■□ 3.09
COL13A1-213ENST00000520267 CARD14Q9BXL6 1004 aa34.33■■■■□ 3.09
COL13A1-213ENST00000520267 NUTM2DQ5VT03 806 aaPredicted RBP34.32■■■■□ 3.08
COL13A1-213ENST00000520267 IDI1Q13907 227 aa34.3■■■■□ 3.08
COL13A1-213ENST00000520267 TSPOAP1O95153 1857 aa34.29■■■■□ 3.08
COL13A1-213ENST00000520267 RCAN3Q9UKA8 241 aa34.28■■■■□ 3.08
COL13A1-213ENST00000520267 PREX1Q8TCU6 1659 aa34.27■■■■□ 3.08
COL13A1-213ENST00000520267 VGFO15240 615 aaPredicted RBP34.27■■■■□ 3.08
COL13A1-213ENST00000520267 WDR43Q15061 677 aaKnown RBP eCLIP34.27■■■■□ 3.08
COL13A1-213ENST00000520267 MYO5BQ9ULV0 1848 aa34.25■■■■□ 3.07
COL13A1-213ENST00000520267 RRP1P56182 461 aaKnown RBP34.24■■■■□ 3.07
COL13A1-213ENST00000520267 SLC52A1Q9NWF4 448 aa34.22■■■■□ 3.07
COL13A1-213ENST00000520267 ARHGEF28Q8N1W1 1705 aaKnown RBP34.21■■■■□ 3.07
COL13A1-213ENST00000520267 TMEM131LA2VDJ0 1609 aa34.18■■■■□ 3.06
COL13A1-213ENST00000520267 CCDC136Q96JN2 1154 aa34.16■■■■□ 3.06
COL13A1-213ENST00000520267 ZFYVE9O95405 1425 aa34.15■■■■□ 3.06
COL13A1-213ENST00000520267 SLC12A5Q9H2X9 1139 aa34.15■■■■□ 3.06
COL13A1-213ENST00000520267 PLEKHH1Q9ULM0 1364 aa34.14■■■■□ 3.06
COL13A1-213ENST00000520267 NSD3Q9BZ95 1437 aa34.13■■■■□ 3.05
COL13A1-213ENST00000520267 FBXO31Q5XUX0 539 aaPredicted RBP34.13■■■■□ 3.05
COL13A1-213ENST00000520267 TULP4Q9NRJ4 1543 aa34.1■■■■□ 3.05
COL13A1-213ENST00000520267 REREQ9P2R6 1566 aa34.08■■■■□ 3.05
COL13A1-213ENST00000520267 SENP3Q9H4L4 574 aaPredicted RBP34.08■■■■□ 3.05
COL13A1-213ENST00000520267 EXOC6Q8TAG9 804 aa34.07■■■■□ 3.04
COL13A1-213ENST00000520267 ZNF521Q96K83 1311 aa34.07■■■■□ 3.04
COL13A1-213ENST00000520267 EVC2Q86UK5 1308 aa34.06■■■■□ 3.04
COL13A1-213ENST00000520267 CCDC146Q8IYE0 955 aa34.05■■■■□ 3.04
COL13A1-213ENST00000520267 AGLP35573 1532 aa34.05■■■■□ 3.04
COL13A1-213ENST00000520267 PUS7Q96PZ0 661 aaKnown RBP34.03■■■■□ 3.04
COL13A1-213ENST00000520267 USP32Q8NFA0 1604 aa34.02■■■■□ 3.04
COL13A1-213ENST00000520267 CLTCQ00610 1675 aaKnown RBP34.01■■■■□ 3.04
COL13A1-213ENST00000520267 MORC1Q86VD1 984 aa34.01■■■■□ 3.03
COL13A1-213ENST00000520267 STK26Q9P289 416 aa34.01■■■■□ 3.03
COL13A1-213ENST00000520267 POLR3AO14802 1390 aaPredicted RBP34■■■■□ 3.03
COL13A1-213ENST00000520267 SAFB2Q14151 953 aaKnown RBP eCLIP34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms