RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 LAMC1P11047 1609 aa15.15■□□□□ 0.02
PABPC1-203ENST00000517921 IDI1Q13907 227 aa15.15■□□□□ 0.02
PABPC1-203ENST00000517921 NBPF8Q3BBV2 869 aa15.15■□□□□ 0.02
PABPC1-203ENST00000517921 ZNF142P52746 1687 aaPredicted RBP15.15■□□□□ 0.02
PABPC1-203ENST00000517921 ILDR1Q86SU0 546 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-203ENST00000517921 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
PABPC1-203ENST00000517921 A2ML1A8K2U0 1454 aa15.13■□□□□ 0.01
PABPC1-203ENST00000517921 NLRP1Q9C000 1473 aa15.13■□□□□ 0.01
PABPC1-203ENST00000517921 NRXN1Q9ULB1 1477 aa15.13■□□□□ 0.01
PABPC1-203ENST00000517921 CHGAP10645 457 aaKnown RBP15.11■□□□□ 0.01
PABPC1-203ENST00000517921 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
PABPC1-203ENST00000517921 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
PABPC1-203ENST00000517921 POLR1AO95602 1720 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-203ENST00000517921 CEP170BQ9Y4F5 1589 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-203ENST00000517921 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
PABPC1-203ENST00000517921 STAC3Q96MF2 364 aa15.08■□□□□ 0
PABPC1-203ENST00000517921 RPGRIP1LQ68CZ1 1315 aa15.08■□□□□ 0
PABPC1-203ENST00000517921 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0
PABPC1-203ENST00000517921 PIK3C2GO75747 1445 aa15.07■□□□□ 0
PABPC1-203ENST00000517921 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
PABPC1-203ENST00000517921 ZFYVE9O95405 1425 aa15.06■□□□□ 0
PABPC1-203ENST00000517921 ADGRF5Q8IZF2 1346 aa15.05■□□□□ -0
PABPC1-203ENST00000517921 GPRASP1Q5JY77 1395 aa15.05■□□□□ -0
PABPC1-203ENST00000517921 SETBP1Q9Y6X0 1596 aa15.05■□□□□ -0
PABPC1-203ENST00000517921 NRXN3Q9Y4C0 1643 aa15.04■□□□□ -0
PABPC1-203ENST00000517921 RIMS2Q9UQ26 1411 aa15.04■□□□□ -0
PABPC1-203ENST00000517921 SLIT1O75093 1534 aa15.03■□□□□ -0
PABPC1-203ENST00000517921 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
PABPC1-203ENST00000517921 ROCK2O75116 1388 aaKnown RBP15.02■□□□□ -0
PABPC1-203ENST00000517921 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
PABPC1-203ENST00000517921 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
PABPC1-203ENST00000517921 ADGRB1O14514 1584 aa15.01□□□□□ -0.01
PABPC1-203ENST00000517921 TMEM2Q9UHN6 1383 aa15□□□□□ -0.01
PABPC1-203ENST00000517921 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
PABPC1-203ENST00000517921 ASXL1Q8IXJ9 1541 aa15□□□□□ -0.01
PABPC1-203ENST00000517921 USP47Q96K76 1375 aa14.99□□□□□ -0.01
PABPC1-203ENST00000517921 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
PABPC1-203ENST00000517921 NBPF1Q3BBV0 1214 aa14.99□□□□□ -0.01
PABPC1-203ENST00000517921 ARHGEF28Q8N1W1 1705 aaKnown RBP14.99□□□□□ -0.01
PABPC1-203ENST00000517921 VGFO15240 615 aaPredicted RBP14.98□□□□□ -0.01
PABPC1-203ENST00000517921 NUTM2DQ5VT03 806 aaPredicted RBP14.98□□□□□ -0.01
PABPC1-203ENST00000517921 HSPA5P11021 654 aaKnown RBP14.97□□□□□ -0.01
PABPC1-203ENST00000517921 CARD11Q9BXL7 1154 aa14.97□□□□□ -0.01
PABPC1-203ENST00000517921 EIF4G2P78344 907 aaKnown RBP eCLIP14.96□□□□□ -0.01
PABPC1-203ENST00000517921 CERKQ8TCT0 537 aa14.96□□□□□ -0.01
PABPC1-203ENST00000517921 KNDC1Q76NI1 1749 aa14.95□□□□□ -0.02
PABPC1-203ENST00000517921 CFAP70Q5T0N1 1121 aa14.95□□□□□ -0.02
PABPC1-203ENST00000517921 SCAF11Q99590 1463 aaKnown RBP14.95□□□□□ -0.02
PABPC1-203ENST00000517921 QRICH2Q9H0J4 1663 aa14.94□□□□□ -0.02
PABPC1-203ENST00000517921 STRCQ7RTU9 1775 aa14.94□□□□□ -0.02
PABPC1-203ENST00000517921 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
PABPC1-203ENST00000517921 C14orf93Q9H972 538 aaKnown RBP14.94□□□□□ -0.02
PABPC1-203ENST00000517921 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.93□□□□□ -0.02
PABPC1-203ENST00000517921 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
PABPC1-203ENST00000517921 DIP2AQ14689 1571 aa14.92□□□□□ -0.02
PABPC1-203ENST00000517921 PLEKHG1Q9ULL1 1385 aa14.91□□□□□ -0.02
PABPC1-203ENST00000517921 THEMISQ8N1K5 641 aaPredicted RBP14.91□□□□□ -0.02
PABPC1-203ENST00000517921 LTKP29376 864 aa14.9□□□□□ -0.02
PABPC1-203ENST00000517921 ADAMTS13Q76LX8 1427 aa14.9□□□□□ -0.02
PABPC1-203ENST00000517921 HDGFP51858 240 aaKnown RBP14.89□□□□□ -0.03
PABPC1-203ENST00000517921 MED14O60244 1454 aa14.89□□□□□ -0.03
PABPC1-203ENST00000517921 EIF3AQ14152 1382 aaKnown RBP14.87□□□□□ -0.03
PABPC1-203ENST00000517921 TXNDC2Q86VQ3 553 aa14.87□□□□□ -0.03
PABPC1-203ENST00000517921 DLC1Q96QB1 1528 aa14.87□□□□□ -0.03
PABPC1-203ENST00000517921 YTHDC2Q9H6S0 1430 aaKnown RBP14.86□□□□□ -0.03
PABPC1-203ENST00000517921 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
PABPC1-203ENST00000517921 TMEM132EQ6IEE7 984 aa14.86□□□□□ -0.03
PABPC1-203ENST00000517921 EID1Q9Y6B2 187 aa14.86□□□□□ -0.03
PABPC1-203ENST00000517921 CHD2O14647 1828 aaKnown RBP14.86□□□□□ -0.03
PABPC1-203ENST00000517921 CPS1P31327 1500 aa14.86□□□□□ -0.03
PABPC1-203ENST00000517921 XRN1Q8IZH2 1706 aaKnown RBP14.86□□□□□ -0.03
PABPC1-203ENST00000517921 ANKLE2Q86XL3 938 aa14.84□□□□□ -0.03
PABPC1-203ENST00000517921 METP08581 1390 aa14.84□□□□□ -0.03
PABPC1-203ENST00000517921 CCDC7Q96M83 1385 aa14.84□□□□□ -0.03
PABPC1-203ENST00000517921 TESK2Q96S53 571 aa14.83□□□□□ -0.04
PABPC1-203ENST00000517921 MYOM1P52179 1685 aa14.82□□□□□ -0.04
PABPC1-203ENST00000517921 C11orf95C9JLR9 678 aaPredicted RBP14.82□□□□□ -0.04
PABPC1-203ENST00000517921 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
PABPC1-203ENST00000517921 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
PABPC1-203ENST00000517921 SBNO2Q9Y2G9 1366 aa14.82□□□□□ -0.04
PABPC1-203ENST00000517921 TECPR2O15040 1411 aa14.82□□□□□ -0.04
PABPC1-203ENST00000517921 TRAK1Q9UPV9 953 aa14.81□□□□□ -0.04
PABPC1-203ENST00000517921 KIF7Q2M1P5 1343 aa14.8□□□□□ -0.04
PABPC1-203ENST00000517921 ZNF335Q9H4Z2 1342 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-203ENST00000517921 DISP3Q9P2K9 1392 aa14.8□□□□□ -0.04
PABPC1-203ENST00000517921 NPHP4O75161 1426 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-203ENST00000517921 CENPJQ9HC77 1338 aaPredicted RBP14.79□□□□□ -0.04
PABPC1-203ENST00000517921 TULP4Q9NRJ4 1543 aa14.78□□□□□ -0.04
PABPC1-203ENST00000517921 PTPRUQ92729 1446 aa14.78□□□□□ -0.04
PABPC1-203ENST00000517921 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
PABPC1-203ENST00000517921 BCANQ96GW7 911 aa14.78□□□□□ -0.04
PABPC1-203ENST00000517921 STK26Q9P289 416 aa14.77□□□□□ -0.05
PABPC1-203ENST00000517921 TBX22Q9Y458 520 aa14.77□□□□□ -0.05
PABPC1-203ENST00000517921 LTBP4Q8N2S1 1624 aa14.77□□□□□ -0.05
PABPC1-203ENST00000517921 NWD1Q149M9 1564 aa14.77□□□□□ -0.05
PABPC1-203ENST00000517921 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.76□□□□□ -0.05
PABPC1-203ENST00000517921 DIEXFQ68CQ4 756 aaKnown RBP14.76□□□□□ -0.05
PABPC1-203ENST00000517921 SLC26A8Q96RN1 970 aa14.76□□□□□ -0.05
PABPC1-203ENST00000517921 PIK3R4Q99570 1358 aa14.75□□□□□ -0.05
PABPC1-203ENST00000517921 ADGRB2O60241 1585 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms