RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PLSCR2Q9NRY7 297 aa6.19□□□□□ -1.42
RNU6-840P-201ENST00000517275 SERPINA10Q9UK55 444 aa6.19□□□□□ -1.42
RNU6-840P-201ENST00000517275 PTPREP23469 700 aa6.18□□□□□ -1.42
RNU6-840P-201ENST00000517275 PRPF38BQ5VTL8 546 aaKnown RBP6.18□□□□□ -1.42
RNU6-840P-201ENST00000517275 RIC3Q7Z5B4 369 aa6.18□□□□□ -1.42
RNU6-840P-201ENST00000517275 MTMR14Q8NCE2 650 aa6.18□□□□□ -1.42
RNU6-840P-201ENST00000517275 KHSRPQ92945 711 aaKnown RBP eCLIP6.18□□□□□ -1.42
RNU6-840P-201ENST00000517275 LHX6Q9UPM6 363 aa6.18□□□□□ -1.42
RNU6-840P-201ENST00000517275 LILRB3O75022 631 aa6.17□□□□□ -1.42
RNU6-840P-201ENST00000517275 MAMSTRQ6ZN01 415 aa6.17□□□□□ -1.42
RNU6-840P-201ENST00000517275 ARID3AQ99856 593 aa6.17□□□□□ -1.42
RNU6-840P-201ENST00000517275 PODXL2Q9NZ53 605 aa6.17□□□□□ -1.42
RNU6-840P-201ENST00000517275 USP46P62068 366 aa6.16□□□□□ -1.42
RNU6-840P-201ENST00000517275 TATDN2Q93075 761 aa6.16□□□□□ -1.42
RNU6-840P-201ENST00000517275 SNRKQ9NRH2 765 aa6.16□□□□□ -1.42
RNU6-840P-201ENST00000517275 C3orf80F5H4A9 247 aa6.15□□□□□ -1.42
RNU6-840P-201ENST00000517275 HOXB1P14653 301 aaPredicted RBP6.15□□□□□ -1.42
RNU6-840P-201ENST00000517275 NUDT18Q6ZVK8 323 aa6.15□□□□□ -1.42
RNU6-840P-201ENST00000517275 ZNF710Q8N1W2 664 aa6.15□□□□□ -1.42
RNU6-840P-201ENST00000517275 SCUBE2Q9NQ36 999 aa6.15□□□□□ -1.42
RNU6-840P-201ENST00000517275 MOXD2PA6NHM9 499 aa6.14□□□□□ -1.43
RNU6-840P-201ENST00000517275 TRIM26Q12899 539 aaPredicted RBP6.14□□□□□ -1.43
RNU6-840P-201ENST00000517275 PACS2Q86VP3 889 aa6.14□□□□□ -1.43
RNU6-840P-201ENST00000517275 CCDC97Q96F63 343 aaPredicted RBP6.14□□□□□ -1.43
RNU6-840P-201ENST00000517275 PNMA3Q9UL41 463 aa6.14□□□□□ -1.43
RNU6-840P-201ENST00000517275 SNPHO15079 494 aa6.13□□□□□ -1.43
RNU6-840P-201ENST00000517275 NUTM1Q86Y26 1132 aa6.13□□□□□ -1.43
RNU6-840P-201ENST00000517275 TRAIPQ9BWF2 469 aa6.13□□□□□ -1.43
RNU6-840P-201ENST00000517275 SLC4A5Q9BY07 1137 aa6.13□□□□□ -1.43
RNU6-840P-201ENST00000517275 DDX11L8A8MPP1 907 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 POTEB2H3BUK9 544 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 HOXA2O43364 376 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 KDM4AO75164 1064 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 PDIA4P13667 645 aaKnown RBP6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 GCGRP47871 477 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 QPCTQ16769 361 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 WWC1Q8IX03 1113 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 PRM3Q9NNZ6 103 aa6.12□□□□□ -1.43
RNU6-840P-201ENST00000517275 USP17L8P0C7I0 530 aa6.11□□□□□ -1.43
RNU6-840P-201ENST00000517275 HRCP23327 699 aa6.11□□□□□ -1.43
RNU6-840P-201ENST00000517275 GJD4Q96KN9 370 aaPredicted RBP6.11□□□□□ -1.43
RNU6-840P-201ENST00000517275 ZBED2Q9BTP6 218 aa6.11□□□□□ -1.43
RNU6-840P-201ENST00000517275 ZBTB3Q9H5J0 574 aa6.11□□□□□ -1.43
RNU6-840P-201ENST00000517275 ZNF777Q9ULD5 760 aaPredicted RBP6.11□□□□□ -1.43
RNU6-840P-201ENST00000517275 ZNF330Q9Y3S2 320 aaPredicted RBP6.11□□□□□ -1.43
RNU6-840P-201ENST00000517275 GPR37L1O60883 481 aa6.1□□□□□ -1.43
RNU6-840P-201ENST00000517275 PPP1R15AO75807 674 aaPredicted RBP6.1□□□□□ -1.43
RNU6-840P-201ENST00000517275 RSPH4AQ5TD94 716 aa6.09□□□□□ -1.43
RNU6-840P-201ENST00000517275 KCNH8Q96L42 1107 aa6.09□□□□□ -1.43
RNU6-840P-201ENST00000517275 GDPD2Q9HCC8 539 aa6.09□□□□□ -1.43
RNU6-840P-201ENST00000517275 NDUFB9Q9Y6M9 179 aa6.09□□□□□ -1.43
RNU6-840P-201ENST00000517275 NDUFV2P19404 249 aa6.08□□□□□ -1.44
RNU6-840P-201ENST00000517275 PROX2Q3B8N5 592 aa6.08□□□□□ -1.44
RNU6-840P-201ENST00000517275 RTL5Q5HYW3 569 aaPredicted RBP6.08□□□□□ -1.44
RNU6-840P-201ENST00000517275 RABGEF1Q9UJ41 708 aa6.08□□□□□ -1.44
RNU6-840P-201ENST00000517275 ATP1B4Q9UN42 357 aaPredicted RBP6.08□□□□□ -1.44
RNU6-840P-201ENST00000517275 PCDHB15Q9Y5E8 787 aa6.08□□□□□ -1.44
RNU6-840P-201ENST00000517275 FDX1P10109 184 aa6.07□□□□□ -1.44
RNU6-840P-201ENST00000517275 KCTD17Q8N5Z5 321 aa6.07□□□□□ -1.44
RNU6-840P-201ENST00000517275 RDH13Q8NBN7 331 aa6.07□□□□□ -1.44
RNU6-840P-201ENST00000517275 KCNK17Q96T54 332 aa6.07□□□□□ -1.44
RNU6-840P-201ENST00000517275 TBC1D2BQ9UPU7 963 aa6.07□□□□□ -1.44
RNU6-840P-201ENST00000517275 ZBTB7CA1YPR0 619 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 AP1G2O75843 785 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 SLC10A3P09131 477 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 IRF5Q13568 498 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 WASHC4Q2M389 1173 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 GLMNQ92990 594 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 TRIM34Q9BYJ4 488 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 PCDHGC3Q9UN70 934 aa6.06□□□□□ -1.44
RNU6-840P-201ENST00000517275 PBX2P40425 430 aa6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 MTMR2Q13614 643 aa6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 FAM98CQ17RN3 349 aaKnown RBP6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 LAPTM4BQ86VI4 370 aa6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 HELBQ8NG08 1087 aaPredicted RBP6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 CABLES1Q8TDN4 633 aa6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 NECTIN2Q92692 538 aa6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 KIAA1468Q9P260 1216 aa6.05□□□□□ -1.44
RNU6-840P-201ENST00000517275 SMAPO00193 183 aa6.04□□□□□ -1.44
RNU6-840P-201ENST00000517275 ABL2P42684 1182 aa6.04□□□□□ -1.44
RNU6-840P-201ENST00000517275 CSPP1Q1MSJ5 1256 aa6.04□□□□□ -1.44
RNU6-840P-201ENST00000517275 SWT1Q5T5J6 900 aaKnown RBP6.04□□□□□ -1.44
RNU6-840P-201ENST00000517275 SLF2Q8IX21 1173 aa6.04□□□□□ -1.44
RNU6-840P-201ENST00000517275 NUTM2BA6NNL0 878 aaPredicted RBP6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 POM121CA8CG34 1229 aa6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 NUTM2EB1AL46 878 aaPredicted RBP6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 ARHGAP33O14559 1287 aa6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 SOX11P35716 441 aa6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 PDE4CQ08493 712 aa6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 GRIPAP1Q4V328 841 aa6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 NUTM2DQ5VT03 806 aaPredicted RBP6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 NUTM2AQ8IVF1 878 aaPredicted RBP6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 RETREG2Q8NC44 543 aa6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 CALR3Q96L12 384 aaKnown RBP6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 HMX1Q9NP08 348 aaPredicted RBP6.03□□□□□ -1.44
RNU6-840P-201ENST00000517275 SLC4A3P48751 1232 aa6.02□□□□□ -1.45
RNU6-840P-201ENST00000517275 DESI1Q6ICB0 168 aa6.02□□□□□ -1.45
RNU6-840P-201ENST00000517275 ADAMTS19Q8TE59 1207 aa6.02□□□□□ -1.45
RNU6-840P-201ENST00000517275 PBXIP1Q96AQ6 731 aa6.02□□□□□ -1.45
RNU6-840P-201ENST00000517275 USTQ9Y2C2 406 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms