RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 MORC1Q86VD1 984 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 IFNLR1Q8IU57 520 aaPredicted RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 WDR63Q8IWG1 891 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 IL27Q8NEV9 243 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 TRIM44Q96DX7 344 aaPredicted RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 ATF5Q9Y2D1 282 aaPredicted RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 ERCC6Q03468 1493 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 MRC2Q9UBG0 1479 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 ZNF644Q9H582 1327 aaPredicted RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 ARHGEF11O15085 1522 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 URB2Q14146 1524 aaKnown RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 ZMYM4Q5VZL5 1548 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 ARHGEF12Q9NZN5 1544 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 KIF14Q15058 1648 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 EIF2AK4Q9P2K8 1649 aaKnown RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 PTPRGP23470 1445 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 SPATA31E1Q6ZUB1 1445 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 SCAPERQ9BY12 1400 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 SYNJ2O15056 1496 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 MAGI1Q96QZ7 1491 aaPredicted RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 VGFO15240 615 aaPredicted RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 PPP2R1AP30153 589 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 RGS3P49796 1198 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 SLFN5Q08AF3 891 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 TMEM132AQ24JP5 1023 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 FTSJ3Q8IY81 847 aaKnown RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 FRAT1Q92837 279 aaPredicted RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 RUNDC1Q96C34 613 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 PUS7Q96PZ0 661 aaKnown RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 CRBNQ96SW2 442 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 CHMP4AQ9BY43 222 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 DNAJC5Q9H3Z4 198 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 ISY1Q9ULR0 285 aaKnown RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 ADAMTS8Q9UP79 889 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 LAS1LQ9Y4W2 734 aaKnown RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 GPATCH8Q9UKJ3 1502 aaKnown RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 RPGRIP1LQ68CZ1 1315 aa2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 LRPPRCP42704 1394 aaKnown RBP2.61□□□□□ -1.99
RNU1-40P-201ENST00000516816 TARBP1Q13395 1621 aaKnown RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 C9orf84Q5VXU9 1444 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 ADGRL2O95490 1459 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 CAMSAP2Q08AD1 1489 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 RALGAPBQ86X10 1494 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 GOLGA6L3A6NEY3 463 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 PER1O15534 1290 aaPredicted RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 PAK3O75914 559 aaPredicted RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 CHGAP10645 457 aaKnown RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 NCLP19338 710 aaKnown RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 NFKBIBQ15653 356 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 ZKSCAN2Q63HK3 967 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 PAXIP1Q6ZW49 1069 aaPredicted RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 HSCBQ8IWL3 235 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 FAM43AQ8N2R8 423 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 SPDYE1Q8NFV5 336 aaPredicted RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 ZNF428Q96B54 188 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 FAM212AQ96EL1 285 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 GBP4Q96PP9 640 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 WDR70Q9NW82 654 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 TERF2IPQ9NYB0 399 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 CIZ1Q9ULV3 898 aaPredicted RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 DDX19BQ9UMR2 479 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 KIF1BO60333 1816 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 KDM5CP41229 1560 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 SPAG9O60271 1321 aaKnown RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 CENPJQ9HC77 1338 aaPredicted RBP2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 KIAA0556O60303 1618 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 ADCY10Q96PN6 1610 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 PARD3Q8TEW0 1356 aa2.6□□□□□ -1.99
RNU1-40P-201ENST00000516816 NUP160Q12769 1436 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 ERBINQ96RT1 1412 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 TEX14Q8IWB6 1497 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 SHANK2Q9UPX8 1470 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 WDR62O43379 1518 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 CDK13Q14004 1512 aaKnown RBP2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 ARHGEF5Q12774 1597 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 DDX11L8A8MPP1 907 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 APAF1O14727 1248 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 PLIN1O60240 522 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 CHRM1P11229 460 aaPredicted RBP2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 NEUROD2Q15784 382 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 SMYD5Q6GMV2 418 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 HDGFL2Q7Z4V5 671 aaPredicted RBP2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 CLUAP1Q96AJ1 413 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 CDCA7LQ96GN5 454 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 CHMP5Q9NZZ3 219 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 SSUH2Q9Y2M2 353 aa2.59□□□□□ -1.99
RNU1-40P-201ENST00000516816 EVC2Q86UK5 1308 aa2.59□□□□□ -2
RNU1-40P-201ENST00000516816 CROCC2H7BZ55 1655 aa2.59□□□□□ -2
RNU1-40P-201ENST00000516816 DHX29Q7Z478 1369 aaKnown RBP2.59□□□□□ -2
RNU1-40P-201ENST00000516816 NPC1L1Q9UHC9 1359 aa2.59□□□□□ -2
RNU1-40P-201ENST00000516816 CDC42BPAQ5VT25 1732 aa2.59□□□□□ -2
RNU1-40P-201ENST00000516816 PRG4Q92954 1404 aaPredicted RBP2.59□□□□□ -2
RNU1-40P-201ENST00000516816 PZPP20742 1482 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 NKTRP30414 1462 aaKnown RBP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 GRIN2AQ12879 1464 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 CCDC141Q6ZP82 1450 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 DUOX2Q9NRD8 1548 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 CFAP65Q6ZU64 1925 aaKnown RBP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 ADAMTS12P58397 1594 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 LAMC1P11047 1609 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms