RNA–Protein interactions for RNA: ENST00000514600.5

LINC00616-205, long intergenic non-protein coding RNA 616, humanhuman

TSL 1 (best) BASIC

Gene LINC00616, Length 2,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-205ENST00000514600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.51□□□□□ -1.05
LINC00616-205ENST00000514600 ZC3H6P61129 1189 aaKnown RBP8.51□□□□□ -1.05
LINC00616-205ENST00000514600 WWC1Q8IX03 1113 aa8.51□□□□□ -1.05
LINC00616-205ENST00000514600 PBXIP1Q96AQ6 731 aa8.51□□□□□ -1.05
LINC00616-205ENST00000514600 GPATCH3Q96I76 525 aa8.51□□□□□ -1.05
LINC00616-205ENST00000514600 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
LINC00616-205ENST00000514600 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
LINC00616-205ENST00000514600 KLHL42Q9P2K6 505 aa8.5□□□□□ -1.05
LINC00616-205ENST00000514600 PHF8Q9UPP1 1060 aa8.5□□□□□ -1.05
LINC00616-205ENST00000514600 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
LINC00616-205ENST00000514600 MCCD1P59942 119 aaPredicted RBP8.49□□□□□ -1.05
LINC00616-205ENST00000514600 AMHR2Q16671 573 aa8.49□□□□□ -1.05
LINC00616-205ENST00000514600 DPH6Q7L8W6 267 aa8.49□□□□□ -1.05
LINC00616-205ENST00000514600 OS9Q13438 667 aaPredicted RBP8.49□□□□□ -1.05
LINC00616-205ENST00000514600 NAALADL2Q58DX5 795 aa8.49□□□□□ -1.05
LINC00616-205ENST00000514600 DNAJC14Q6Y2X3 702 aaPredicted RBP8.49□□□□□ -1.05
LINC00616-205ENST00000514600 VTI1AQ96AJ9 217 aa8.49□□□□□ -1.05
LINC00616-205ENST00000514600 RBM10P98175 930 aaKnown RBP8.48□□□□□ -1.05
LINC00616-205ENST00000514600 MORC4Q8TE76 937 aa8.47□□□□□ -1.05
LINC00616-205ENST00000514600 NOM1Q5C9Z4 860 aaKnown RBP8.47□□□□□ -1.05
LINC00616-205ENST00000514600 CCDC102AQ96A19 550 aa8.47□□□□□ -1.05
LINC00616-205ENST00000514600 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00616-205ENST00000514600 SBNO2Q9Y2G9 1366 aa8.47□□□□□ -1.05
LINC00616-205ENST00000514600 GPR37O15354 613 aa8.46□□□□□ -1.05
LINC00616-205ENST00000514600 FBXO22Q8NEZ5 403 aa8.46□□□□□ -1.05
LINC00616-205ENST00000514600 RFX1P22670 979 aa8.46□□□□□ -1.06
LINC00616-205ENST00000514600 GLMNQ92990 594 aa8.45□□□□□ -1.06
LINC00616-205ENST00000514600 PPFIA4O75335 1185 aa8.44□□□□□ -1.06
LINC00616-205ENST00000514600 PARNO95453 639 aaKnown RBP8.44□□□□□ -1.06
LINC00616-205ENST00000514600 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
LINC00616-205ENST00000514600 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
LINC00616-205ENST00000514600 VRTNQ9H8Y1 702 aa8.44□□□□□ -1.06
LINC00616-205ENST00000514600 POM121CA8CG34 1229 aa8.43□□□□□ -1.06
LINC00616-205ENST00000514600 MS4A1P11836 297 aa8.43□□□□□ -1.06
LINC00616-205ENST00000514600 MS4A3Q96HJ5 214 aa8.43□□□□□ -1.06
LINC00616-205ENST00000514600 BCL2L13Q9BXK5 485 aa8.43□□□□□ -1.06
LINC00616-205ENST00000514600 KCNG1Q9UIX4 513 aa8.43□□□□□ -1.06
LINC00616-205ENST00000514600 GNEQ9Y223 722 aaKnown RBP8.43□□□□□ -1.06
LINC00616-205ENST00000514600 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
LINC00616-205ENST00000514600 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 SMC5Q8IY18 1101 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 GIPC2Q8TF65 315 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 SECISBP2LQ93073 1101 aaKnown RBP8.42□□□□□ -1.06
LINC00616-205ENST00000514600 LARGE2Q8N3Y3 721 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 MS4A4AQ96JQ5 239 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 UBA5Q9GZZ9 404 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
LINC00616-205ENST00000514600 MINK1Q8N4C8 1332 aaPredicted RBP8.42□□□□□ -1.06
LINC00616-205ENST00000514600 FOXD4Q12950 439 aaPredicted RBP8.41□□□□□ -1.06
LINC00616-205ENST00000514600 CCDC181Q5TID7 509 aa8.41□□□□□ -1.06
LINC00616-205ENST00000514600 TMEM106CQ9BVX2 250 aa8.41□□□□□ -1.06
LINC00616-205ENST00000514600 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
LINC00616-205ENST00000514600 METTL14Q9HCE5 456 aaKnown RBP8.41□□□□□ -1.06
LINC00616-205ENST00000514600 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
LINC00616-205ENST00000514600 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
LINC00616-205ENST00000514600 CREB3O43889 395 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 ERCC3P19447 782 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 NLRP6P59044 892 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 PMM1Q92871 262 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 CCDC194A0A1B0GVG4 234 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 TMEM88BA6NKF7 163 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 IRF6O14896 467 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 NEFMP07197 916 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 POTEIP0CG38 1075 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
LINC00616-205ENST00000514600 RPS6KL1Q9Y6S9 549 aa8.39□□□□□ -1.07
LINC00616-205ENST00000514600 PSME1Q06323 249 aa8.38□□□□□ -1.07
LINC00616-205ENST00000514600 TTLL12Q14166 644 aaPredicted RBP8.38□□□□□ -1.07
LINC00616-205ENST00000514600 LONRF3Q496Y0 759 aa8.38□□□□□ -1.07
LINC00616-205ENST00000514600 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
LINC00616-205ENST00000514600 GDPD2Q9HCC8 539 aa8.38□□□□□ -1.07
LINC00616-205ENST00000514600 PTMAP06454 111 aaKnown RBP8.37□□□□□ -1.07
LINC00616-205ENST00000514600 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
LINC00616-205ENST00000514600 SOX12O15370 315 aa8.37□□□□□ -1.07
LINC00616-205ENST00000514600 PAX3P23760 479 aa8.37□□□□□ -1.07
LINC00616-205ENST00000514600 MAP2K5Q13163 448 aa8.37□□□□□ -1.07
LINC00616-205ENST00000514600 NOP9Q86U38 636 aaKnown RBP8.37□□□□□ -1.07
LINC00616-205ENST00000514600 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
LINC00616-205ENST00000514600 PNMA2Q9UL42 364 aa8.36□□□□□ -1.07
LINC00616-205ENST00000514600 NAP1L2Q9ULW6 460 aaPredicted RBP8.36□□□□□ -1.07
LINC00616-205ENST00000514600 FAN1Q9Y2M0 1017 aa8.36□□□□□ -1.07
LINC00616-205ENST00000514600 NCKAP5LQ9HCH0 1330 aa8.36□□□□□ -1.07
LINC00616-205ENST00000514600 ZFYVE27Q5T4F4 411 aa8.36□□□□□ -1.07
LINC00616-205ENST00000514600 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
LINC00616-205ENST00000514600 OTUD5Q96G74 571 aa8.36□□□□□ -1.07
LINC00616-205ENST00000514600 LNPKQ9C0E8 428 aa8.36□□□□□ -1.07
LINC00616-205ENST00000514600 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
LINC00616-205ENST00000514600 IGBP1P78318 339 aa8.35□□□□□ -1.07
LINC00616-205ENST00000514600 SPACA7Q96KW9 195 aa8.35□□□□□ -1.07
LINC00616-205ENST00000514600 SPOCK3Q9BQ16 436 aa8.35□□□□□ -1.07
LINC00616-205ENST00000514600 MTA3Q9BTC8 594 aa8.35□□□□□ -1.07
LINC00616-205ENST00000514600 hCG_2014768A0A024R1R8 64 aa8.34□□□□□ -1.07
LINC00616-205ENST00000514600 GALR2O43603 387 aaPredicted RBP8.34□□□□□ -1.07
LINC00616-205ENST00000514600 PTPROQ16827 1216 aa8.34□□□□□ -1.07
LINC00616-205ENST00000514600 TLDC2A0PJX2 215 aa8.34□□□□□ -1.07
LINC00616-205ENST00000514600 HMGB1P1B2RPK0 211 aaPredicted RBP8.34□□□□□ -1.07
LINC00616-205ENST00000514600 RECKO95980 971 aa8.34□□□□□ -1.07
LINC00616-205ENST00000514600 GOLGA2Q08379 1002 aa8.34□□□□□ -1.07
LINC00616-205ENST00000514600 GABBR1Q9UBS5 961 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms