RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 EFCAB6Q5THR3 1501 aa24.32■■□□□ 1.48
SNCAIP-220ENST00000514497 ROBO1Q9Y6N7 1651 aa24.31■■□□□ 1.48
SNCAIP-220ENST00000514497 ARHGAP31Q2M1Z3 1444 aa24.31■■□□□ 1.48
SNCAIP-220ENST00000514497 SCAF11Q99590 1463 aaKnown RBP24.29■■□□□ 1.48
SNCAIP-220ENST00000514497 E9PCH4 1651 aa24.29■■□□□ 1.48
SNCAIP-220ENST00000514497 UBR1Q8IWV7 1749 aa24.29■■□□□ 1.48
SNCAIP-220ENST00000514497 UPF1Q92900 1129 aaKnown RBP eCLIP24.27■■□□□ 1.48
SNCAIP-220ENST00000514497 CFAP65Q6ZU64 1925 aaKnown RBP24.26■■□□□ 1.47
SNCAIP-220ENST00000514497 ANKRD30BQ9BXX2 1392 aa24.23■■□□□ 1.47
SNCAIP-220ENST00000514497 ERVK-7P63135 1459 aa24.23■■□□□ 1.47
SNCAIP-220ENST00000514497 SPHKAPQ2M3C7 1700 aa24.22■■□□□ 1.47
SNCAIP-220ENST00000514497 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
SNCAIP-220ENST00000514497 LTKP29376 864 aa24.21■■□□□ 1.47
SNCAIP-220ENST00000514497 TMEM94Q12767 1356 aa24.2■■□□□ 1.46
SNCAIP-220ENST00000514497 PHLPP1O60346 1717 aa24.2■■□□□ 1.46
SNCAIP-220ENST00000514497 SLIT1O75093 1534 aa24.18■■□□□ 1.46
SNCAIP-220ENST00000514497 ARHGAP23Q9P227 1491 aa24.18■■□□□ 1.46
SNCAIP-220ENST00000514497 TRPM2O94759 1503 aa24.17■■□□□ 1.46
SNCAIP-220ENST00000514497 JCADQ9P266 1359 aa24.16■■□□□ 1.46
SNCAIP-220ENST00000514497 FOXD1Q16676 465 aa24.15■■□□□ 1.46
SNCAIP-220ENST00000514497 EID1Q9Y6B2 187 aa24.15■■□□□ 1.46
SNCAIP-220ENST00000514497 NOS1P29475 1434 aa24.14■■□□□ 1.45
SNCAIP-220ENST00000514497 TIMELESSQ9UNS1 1208 aa24.13■■□□□ 1.45
SNCAIP-220ENST00000514497 CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
SNCAIP-220ENST00000514497 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
SNCAIP-220ENST00000514497 PROSER2Q86WR7 435 aaPredicted RBP24.11■■□□□ 1.45
SNCAIP-220ENST00000514497 RBM33Q96EV2 1170 aaKnown RBP24.11■■□□□ 1.45
SNCAIP-220ENST00000514497 ZNF772Q68DY9 489 aaPredicted RBP24.1■■□□□ 1.45
SNCAIP-220ENST00000514497 KCNA6P17658 529 aa24.09■■□□□ 1.45
SNCAIP-220ENST00000514497 MEX3CQ5U5Q3 659 aaKnown RBP24.08■■□□□ 1.45
SNCAIP-220ENST00000514497 SLC52A1Q9NWF4 448 aa24.08■■□□□ 1.45
SNCAIP-220ENST00000514497 PIK3C2BO00750 1634 aa24.06■■□□□ 1.44
SNCAIP-220ENST00000514497 LRP6O75581 1613 aa24.06■■□□□ 1.44
SNCAIP-220ENST00000514497 KIF1BO60333 1816 aa24.06■■□□□ 1.44
SNCAIP-220ENST00000514497 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
SNCAIP-220ENST00000514497 SLAIN2Q9P270 581 aa24.05■■□□□ 1.44
SNCAIP-220ENST00000514497 COL16A1Q07092 1604 aaPredicted RBP24.05■■□□□ 1.44
SNCAIP-220ENST00000514497 MSH6P52701 1360 aa24.04■■□□□ 1.44
SNCAIP-220ENST00000514497 TMEM2Q9UHN6 1383 aa24.03■■□□□ 1.44
SNCAIP-220ENST00000514497 CLTCL1P53675 1640 aa24.03■■□□□ 1.44
SNCAIP-220ENST00000514497 SPATA31A6Q5VVP1 1343 aa24.03■■□□□ 1.44
SNCAIP-220ENST00000514497 RXRBP28702 533 aa24.02■■□□□ 1.44
SNCAIP-220ENST00000514497 SIN3AQ96ST3 1273 aa24.02■■□□□ 1.44
SNCAIP-220ENST00000514497 SLC26A8Q96RN1 970 aa24.01■■□□□ 1.43
SNCAIP-220ENST00000514497 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
SNCAIP-220ENST00000514497 STAG3Q9UJ98 1225 aa24■■□□□ 1.43
SNCAIP-220ENST00000514497 KDM5AP29375 1690 aaKnown RBP23.99■■□□□ 1.43
SNCAIP-220ENST00000514497 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
SNCAIP-220ENST00000514497 NWD1Q149M9 1564 aa23.98■■□□□ 1.43
SNCAIP-220ENST00000514497 TONSLQ96HA7 1378 aa23.97■■□□□ 1.43
SNCAIP-220ENST00000514497 CDK12Q9NYV4 1490 aaPredicted RBP23.96■■□□□ 1.43
SNCAIP-220ENST00000514497 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
SNCAIP-220ENST00000514497 SHPRHQ149N8 1683 aa23.95■■□□□ 1.42
SNCAIP-220ENST00000514497 SPATA31E1Q6ZUB1 1445 aa23.94■■□□□ 1.42
SNCAIP-220ENST00000514497 IDI1Q13907 227 aa23.94■■□□□ 1.42
SNCAIP-220ENST00000514497 ADGRB3O60242 1522 aa23.92■■□□□ 1.42
SNCAIP-220ENST00000514497 TMEM131LA2VDJ0 1609 aa23.91■■□□□ 1.42
SNCAIP-220ENST00000514497 RPGRIP1LQ68CZ1 1315 aa23.89■■□□□ 1.42
SNCAIP-220ENST00000514497 BCANQ96GW7 911 aa23.89■■□□□ 1.41
SNCAIP-220ENST00000514497 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
SNCAIP-220ENST00000514497 AHDC1Q5TGY3 1603 aaPredicted RBP23.87■■□□□ 1.41
SNCAIP-220ENST00000514497 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
SNCAIP-220ENST00000514497 MYO5BQ9ULV0 1848 aa23.85■■□□□ 1.41
SNCAIP-220ENST00000514497 NUTM2BA6NNL0 878 aaPredicted RBP23.85■■□□□ 1.41
SNCAIP-220ENST00000514497 NUTM2EB1AL46 878 aaPredicted RBP23.85■■□□□ 1.41
SNCAIP-220ENST00000514497 NUTM2AQ8IVF1 878 aaPredicted RBP23.85■■□□□ 1.41
SNCAIP-220ENST00000514497 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
SNCAIP-220ENST00000514497 AFF2P51816 1311 aa23.83■■□□□ 1.4
SNCAIP-220ENST00000514497 PPP1R15AO75807 674 aaPredicted RBP23.82■■□□□ 1.4
SNCAIP-220ENST00000514497 RGL3Q3MIN7 710 aa23.82■■□□□ 1.4
SNCAIP-220ENST00000514497 PPLO60437 1756 aa23.82■■□□□ 1.4
SNCAIP-220ENST00000514497 RGS12O14924 1447 aa23.82■■□□□ 1.4
SNCAIP-220ENST00000514497 CHGAP10645 457 aaKnown RBP23.81■■□□□ 1.4
SNCAIP-220ENST00000514497 C14orf37Q86TY3 774 aa23.81■■□□□ 1.4
SNCAIP-220ENST00000514497 HDGFP51858 240 aaKnown RBP23.79■■□□□ 1.4
SNCAIP-220ENST00000514497 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
SNCAIP-220ENST00000514497 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.79■■□□□ 1.4
SNCAIP-220ENST00000514497 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
SNCAIP-220ENST00000514497 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
SNCAIP-220ENST00000514497 ZNF326Q5BKZ1 582 aaKnown RBP23.78■■□□□ 1.4
SNCAIP-220ENST00000514497 DCAF11Q8TEB1 546 aa23.78■■□□□ 1.4
SNCAIP-220ENST00000514497 MYOM2P54296 1465 aa23.78■■□□□ 1.4
SNCAIP-220ENST00000514497 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
SNCAIP-220ENST00000514497 NEXMIFQ5QGS0 1516 aa23.76■■□□□ 1.39
SNCAIP-220ENST00000514497 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
SNCAIP-220ENST00000514497 CADPS2Q86UW7 1296 aa23.76■■□□□ 1.39
SNCAIP-220ENST00000514497 RBM6P78332 1123 aaKnown RBP23.75■■□□□ 1.39
SNCAIP-220ENST00000514497 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.75■■□□□ 1.39
SNCAIP-220ENST00000514497 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
SNCAIP-220ENST00000514497 ATF3P18847 181 aa23.74■■□□□ 1.39
SNCAIP-220ENST00000514497 QTRT2Q9H974 415 aaKnown RBP23.74■■□□□ 1.39
SNCAIP-220ENST00000514497 C19orf44Q9H6X5 657 aa23.72■■□□□ 1.39
SNCAIP-220ENST00000514497 NRXN1Q9ULB1 1477 aa23.71■■□□□ 1.39
SNCAIP-220ENST00000514497 PLEKHG1Q9ULL1 1385 aa23.71■■□□□ 1.39
SNCAIP-220ENST00000514497 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
SNCAIP-220ENST00000514497 ATAD2Q6PL18 1390 aa23.7■■□□□ 1.38
SNCAIP-220ENST00000514497 KIAA1210Q9ULL0 1709 aa23.7■■□□□ 1.38
SNCAIP-220ENST00000514497 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
SNCAIP-220ENST00000514497 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
SNCAIP-220ENST00000514497 BRINP3Q76B58 766 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms