RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 RSPH4AQ5TD94 716 aa16.3■□□□□ 0.2
PRDM16-208ENST00000514189 TCP11L2Q8N4U5 519 aa16.3■□□□□ 0.2
PRDM16-208ENST00000514189 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
PRDM16-208ENST00000514189 C20orf194Q5TEA3 1177 aa16.3■□□□□ 0.2
PRDM16-208ENST00000514189 DZIP1LQ8IYY4 767 aaKnown RBP16.3■□□□□ 0.2
PRDM16-208ENST00000514189 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
PRDM16-208ENST00000514189 SLC12A5Q9H2X9 1139 aa16.29■□□□□ 0.2
PRDM16-208ENST00000514189 ANKRD50Q9ULJ7 1429 aa16.29■□□□□ 0.2
PRDM16-208ENST00000514189 KIAA0586Q9BVV6 1533 aa16.28■□□□□ 0.2
PRDM16-208ENST00000514189 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
PRDM16-208ENST00000514189 EIF3AQ14152 1382 aaKnown RBP16.27■□□□□ 0.2
PRDM16-208ENST00000514189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.2
PRDM16-208ENST00000514189 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
PRDM16-208ENST00000514189 NGDNQ8NEJ9 315 aaKnown RBP16.27■□□□□ 0.2
PRDM16-208ENST00000514189 EFCAB5A4FU69 1503 aa16.27■□□□□ 0.19
PRDM16-208ENST00000514189 CUL7Q14999 1698 aa16.27■□□□□ 0.19
PRDM16-208ENST00000514189 ZNF428Q96B54 188 aa16.27■□□□□ 0.19
PRDM16-208ENST00000514189 BACH2Q9BYV9 841 aa16.27■□□□□ 0.19
PRDM16-208ENST00000514189 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
PRDM16-208ENST00000514189 SYNJ2O15056 1496 aa16.26■□□□□ 0.19
PRDM16-208ENST00000514189 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
PRDM16-208ENST00000514189 AMPHP49418 695 aa16.25■□□□□ 0.19
PRDM16-208ENST00000514189 CHMP3Q9Y3E7 222 aa16.25■□□□□ 0.19
PRDM16-208ENST00000514189 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
PRDM16-208ENST00000514189 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
PRDM16-208ENST00000514189 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
PRDM16-208ENST00000514189 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
PRDM16-208ENST00000514189 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
PRDM16-208ENST00000514189 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
PRDM16-208ENST00000514189 FYCO1Q9BQS8 1478 aa16.22■□□□□ 0.19
PRDM16-208ENST00000514189 NGEFQ8N5V2 710 aa16.22■□□□□ 0.19
PRDM16-208ENST00000514189 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
PRDM16-208ENST00000514189 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
PRDM16-208ENST00000514189 RUNDC1Q96C34 613 aa16.21■□□□□ 0.19
PRDM16-208ENST00000514189 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.18
PRDM16-208ENST00000514189 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
PRDM16-208ENST00000514189 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
PRDM16-208ENST00000514189 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
PRDM16-208ENST00000514189 CSB-PGBD3P0DP91 1061 aa16.19■□□□□ 0.18
PRDM16-208ENST00000514189 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
PRDM16-208ENST00000514189 HMMRO75330 724 aa16.19■□□□□ 0.18
PRDM16-208ENST00000514189 KIAA2012Q0VF49 1180 aa16.19■□□□□ 0.18
PRDM16-208ENST00000514189 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
PRDM16-208ENST00000514189 NUTM2GQ5VZR2 741 aa16.19■□□□□ 0.18
PRDM16-208ENST00000514189 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
PRDM16-208ENST00000514189 MPNDQ8N594 471 aa16.18■□□□□ 0.18
PRDM16-208ENST00000514189 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
PRDM16-208ENST00000514189 NAIPQ13075 1403 aa16.18■□□□□ 0.18
PRDM16-208ENST00000514189 ST18O60284 1047 aa16.18■□□□□ 0.18
PRDM16-208ENST00000514189 CHAF1AQ13111 956 aaPredicted RBP16.18■□□□□ 0.18
PRDM16-208ENST00000514189 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
PRDM16-208ENST00000514189 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
PRDM16-208ENST00000514189 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
PRDM16-208ENST00000514189 HFM1A2PYH4 1435 aa16.15■□□□□ 0.18
PRDM16-208ENST00000514189 RNF214Q8ND24 703 aa16.15■□□□□ 0.18
PRDM16-208ENST00000514189 COG3Q96JB2 828 aa16.15■□□□□ 0.18
PRDM16-208ENST00000514189 ANO2Q9NQ90 1003 aa16.15■□□□□ 0.18
PRDM16-208ENST00000514189 NPHP1O15259 732 aa16.15■□□□□ 0.18
PRDM16-208ENST00000514189 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
PRDM16-208ENST00000514189 MCTP1Q6DN14 999 aa16.13■□□□□ 0.17
PRDM16-208ENST00000514189 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
PRDM16-208ENST00000514189 FKBP5Q13451 457 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-208ENST00000514189 FAM13BQ9NYF5 915 aa16.11■□□□□ 0.17
PRDM16-208ENST00000514189 GNL2Q13823 731 aaKnown RBP16.11■□□□□ 0.17
PRDM16-208ENST00000514189 WDR62O43379 1518 aa16.11■□□□□ 0.17
PRDM16-208ENST00000514189 TRAK2O60296 914 aa16.1■□□□□ 0.17
PRDM16-208ENST00000514189 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
PRDM16-208ENST00000514189 THUMPD2Q9BTF0 503 aaKnown RBP16.1■□□□□ 0.17
PRDM16-208ENST00000514189 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
PRDM16-208ENST00000514189 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
PRDM16-208ENST00000514189 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
PRDM16-208ENST00000514189 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.17
PRDM16-208ENST00000514189 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.17
PRDM16-208ENST00000514189 SYAP1Q96A49 352 aaPredicted RBP16.08■□□□□ 0.16
PRDM16-208ENST00000514189 PLB1Q6P1J6 1458 aa16.07■□□□□ 0.16
PRDM16-208ENST00000514189 FOSBP53539 338 aa16.07■□□□□ 0.16
PRDM16-208ENST00000514189 CDK13Q14004 1512 aaKnown RBP16.07■□□□□ 0.16
PRDM16-208ENST00000514189 CREBRFQ8IUR6 639 aa16.07■□□□□ 0.16
PRDM16-208ENST00000514189 FBXW7Q969H0 707 aa16.06■□□□□ 0.16
PRDM16-208ENST00000514189 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
PRDM16-208ENST00000514189 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
PRDM16-208ENST00000514189 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
PRDM16-208ENST00000514189 EPRSP07814 1512 aaKnown RBP16.06■□□□□ 0.16
PRDM16-208ENST00000514189 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
PRDM16-208ENST00000514189 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
PRDM16-208ENST00000514189 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
PRDM16-208ENST00000514189 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRDM16-208ENST00000514189 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
PRDM16-208ENST00000514189 NRDCO43847 1150 aa16.05■□□□□ 0.16
PRDM16-208ENST00000514189 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
PRDM16-208ENST00000514189 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
PRDM16-208ENST00000514189 VPS37CA5D8V6 355 aaPredicted RBP16.04■□□□□ 0.16
PRDM16-208ENST00000514189 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
PRDM16-208ENST00000514189 TEFQ10587 303 aa16.04■□□□□ 0.16
PRDM16-208ENST00000514189 TOMM22Q9NS69 142 aa16.04■□□□□ 0.16
PRDM16-208ENST00000514189 GOLGA6L6A8MZA4 724 aa16.03■□□□□ 0.16
PRDM16-208ENST00000514189 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
PRDM16-208ENST00000514189 TSPYL4Q9UJ04 414 aa16.03■□□□□ 0.16
PRDM16-208ENST00000514189 FAM69CQ0P6D2 419 aa16.03■□□□□ 0.16
PRDM16-208ENST00000514189 MIA2Q96PC5 1412 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms