RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 MSH6P52701 1360 aa13.89□□□□□ -0.19
PABPC4-218ENST00000513632 TBX22Q9Y458 520 aa13.88□□□□□ -0.19
PABPC4-218ENST00000513632 PLEKHG1Q9ULL1 1385 aa13.87□□□□□ -0.19
PABPC4-218ENST00000513632 STRCP1A6NGW2 1772 aa13.87□□□□□ -0.19
PABPC4-218ENST00000513632 ITGAEP38570 1179 aa13.87□□□□□ -0.19
PABPC4-218ENST00000513632 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
PABPC4-218ENST00000513632 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
PABPC4-218ENST00000513632 ROCK1Q13464 1354 aa13.86□□□□□ -0.19
PABPC4-218ENST00000513632 ADGRB3O60242 1522 aa13.86□□□□□ -0.19
PABPC4-218ENST00000513632 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
PABPC4-218ENST00000513632 KDM5AP29375 1690 aaKnown RBP13.85□□□□□ -0.19
PABPC4-218ENST00000513632 NKTRP30414 1462 aaKnown RBP13.85□□□□□ -0.19
PABPC4-218ENST00000513632 TET3O43151 1660 aa13.85□□□□□ -0.19
PABPC4-218ENST00000513632 NUP155O75694 1391 aa13.84□□□□□ -0.19
PABPC4-218ENST00000513632 NUTM2DQ5VT03 806 aaPredicted RBP13.83□□□□□ -0.2
PABPC4-218ENST00000513632 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
PABPC4-218ENST00000513632 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
PABPC4-218ENST00000513632 NCOA3Q9Y6Q9 1424 aa13.81□□□□□ -0.2
PABPC4-218ENST00000513632 ATF3P18847 181 aa13.81□□□□□ -0.2
PABPC4-218ENST00000513632 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
PABPC4-218ENST00000513632 C19orf44Q9H6X5 657 aa13.8□□□□□ -0.2
PABPC4-218ENST00000513632 PIK3R4Q99570 1358 aa13.8□□□□□ -0.2
PABPC4-218ENST00000513632 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
PABPC4-218ENST00000513632 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
PABPC4-218ENST00000513632 AMOTL2Q9Y2J4 779 aa13.79□□□□□ -0.2
PABPC4-218ENST00000513632 JCADQ9P266 1359 aa13.78□□□□□ -0.2
PABPC4-218ENST00000513632 NWD1Q149M9 1564 aa13.76□□□□□ -0.21
PABPC4-218ENST00000513632 POTEAQ6S8J7 498 aa13.76□□□□□ -0.21
PABPC4-218ENST00000513632 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
PABPC4-218ENST00000513632 ADAMTS13Q76LX8 1427 aa13.74□□□□□ -0.21
PABPC4-218ENST00000513632 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
PABPC4-218ENST00000513632 UNC13BO14795 1591 aa13.74□□□□□ -0.21
PABPC4-218ENST00000513632 ROBO1Q9Y6N7 1651 aa13.73□□□□□ -0.21
PABPC4-218ENST00000513632 SPATA31A6Q5VVP1 1343 aa13.73□□□□□ -0.21
PABPC4-218ENST00000513632 XIRP1Q702N8 1843 aaKnown RBP13.73□□□□□ -0.21
PABPC4-218ENST00000513632 ZNF772Q68DY9 489 aaPredicted RBP13.71□□□□□ -0.21
PABPC4-218ENST00000513632 GCC2Q8IWJ2 1684 aa13.71□□□□□ -0.21
PABPC4-218ENST00000513632 DIP2AQ14689 1571 aa13.71□□□□□ -0.22
PABPC4-218ENST00000513632 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
PABPC4-218ENST00000513632 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
PABPC4-218ENST00000513632 TRPM2O94759 1503 aa13.69□□□□□ -0.22
PABPC4-218ENST00000513632 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
PABPC4-218ENST00000513632 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
PABPC4-218ENST00000513632 E9PCH4 1651 aa13.68□□□□□ -0.22
PABPC4-218ENST00000513632 PTPRUQ92729 1446 aa13.67□□□□□ -0.22
PABPC4-218ENST00000513632 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
PABPC4-218ENST00000513632 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
PABPC4-218ENST00000513632 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
PABPC4-218ENST00000513632 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
PABPC4-218ENST00000513632 DCCP43146 1447 aa13.66□□□□□ -0.22
PABPC4-218ENST00000513632 LRRC59Q96AG4 307 aaKnown RBP13.66□□□□□ -0.22
PABPC4-218ENST00000513632 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
PABPC4-218ENST00000513632 METP08581 1390 aa13.64□□□□□ -0.23
PABPC4-218ENST00000513632 RXRBP28702 533 aa13.64□□□□□ -0.23
PABPC4-218ENST00000513632 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
PABPC4-218ENST00000513632 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
PABPC4-218ENST00000513632 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
PABPC4-218ENST00000513632 NAIPQ13075 1403 aa13.62□□□□□ -0.23
PABPC4-218ENST00000513632 MYO5BQ9ULV0 1848 aa13.62□□□□□ -0.23
PABPC4-218ENST00000513632 SETBP1Q9Y6X0 1596 aa13.61□□□□□ -0.23
PABPC4-218ENST00000513632 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
PABPC4-218ENST00000513632 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.6□□□□□ -0.23
PABPC4-218ENST00000513632 COL16A1Q07092 1604 aaPredicted RBP13.6□□□□□ -0.23
PABPC4-218ENST00000513632 MST1RQ04912 1400 aa13.59□□□□□ -0.23
PABPC4-218ENST00000513632 SETD5Q9C0A6 1442 aa13.59□□□□□ -0.23
PABPC4-218ENST00000513632 ADGRL3Q9HAR2 1447 aa13.58□□□□□ -0.24
PABPC4-218ENST00000513632 LRP6O75581 1613 aa13.58□□□□□ -0.24
PABPC4-218ENST00000513632 AFF2P51816 1311 aa13.58□□□□□ -0.24
PABPC4-218ENST00000513632 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
PABPC4-218ENST00000513632 ASXL1Q8IXJ9 1541 aa13.57□□□□□ -0.24
PABPC4-218ENST00000513632 HFM1A2PYH4 1435 aa13.56□□□□□ -0.24
PABPC4-218ENST00000513632 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
PABPC4-218ENST00000513632 QTRT2Q9H974 415 aaKnown RBP13.56□□□□□ -0.24
PABPC4-218ENST00000513632 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
PABPC4-218ENST00000513632 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
PABPC4-218ENST00000513632 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
PABPC4-218ENST00000513632 NEXMIFQ5QGS0 1516 aa13.54□□□□□ -0.24
PABPC4-218ENST00000513632 RBM6P78332 1123 aaKnown RBP13.54□□□□□ -0.24
PABPC4-218ENST00000513632 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
PABPC4-218ENST00000513632 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
PABPC4-218ENST00000513632 C1orf167Q5SNV9 1468 aa13.54□□□□□ -0.24
PABPC4-218ENST00000513632 NRXN3Q9Y4C0 1643 aa13.53□□□□□ -0.24
PABPC4-218ENST00000513632 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
PABPC4-218ENST00000513632 RGL3Q3MIN7 710 aa13.53□□□□□ -0.24
PABPC4-218ENST00000513632 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
PABPC4-218ENST00000513632 ROBO2Q9HCK4 1378 aa13.53□□□□□ -0.24
PABPC4-218ENST00000513632 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
PABPC4-218ENST00000513632 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
PABPC4-218ENST00000513632 ESCO1Q5FWF5 840 aa13.52□□□□□ -0.25
PABPC4-218ENST00000513632 ACIN1Q9UKV3 1341 aaKnown RBP13.52□□□□□ -0.25
PABPC4-218ENST00000513632 SHPRHQ149N8 1683 aa13.51□□□□□ -0.25
PABPC4-218ENST00000513632 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
PABPC4-218ENST00000513632 FOXD1Q16676 465 aa13.51□□□□□ -0.25
PABPC4-218ENST00000513632 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
PABPC4-218ENST00000513632 CCDC144AA2RUR9 1427 aa13.5□□□□□ -0.25
PABPC4-218ENST00000513632 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
PABPC4-218ENST00000513632 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
PABPC4-218ENST00000513632 STK26Q9P289 416 aa13.5□□□□□ -0.25
PABPC4-218ENST00000513632 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
PABPC4-218ENST00000513632 USP21Q9UK80 565 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms