RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 ADGRB3O60242 1522 aa15.57■□□□□ 0.08
PFDN1-204ENST00000512707 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
PFDN1-204ENST00000512707 STAC3Q96MF2 364 aa15.56■□□□□ 0.08
PFDN1-204ENST00000512707 RPGRIP1LQ68CZ1 1315 aa15.54■□□□□ 0.08
PFDN1-204ENST00000512707 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
PFDN1-204ENST00000512707 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
PFDN1-204ENST00000512707 KDM5AP29375 1690 aaKnown RBP15.52■□□□□ 0.08
PFDN1-204ENST00000512707 TMEM131LA2VDJ0 1609 aa15.51■□□□□ 0.07
PFDN1-204ENST00000512707 MYO3AQ8NEV4 1616 aa15.51■□□□□ 0.07
PFDN1-204ENST00000512707 PPP1R15AO75807 674 aaPredicted RBP15.51■□□□□ 0.07
PFDN1-204ENST00000512707 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
PFDN1-204ENST00000512707 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
PFDN1-204ENST00000512707 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
PFDN1-204ENST00000512707 A2ML1A8K2U0 1454 aa15.5■□□□□ 0.07
PFDN1-204ENST00000512707 MYOM2P54296 1465 aa15.48■□□□□ 0.07
PFDN1-204ENST00000512707 VGFO15240 615 aaPredicted RBP15.48■□□□□ 0.07
PFDN1-204ENST00000512707 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
PFDN1-204ENST00000512707 CEP170BQ9Y4F5 1589 aaPredicted RBP15.48■□□□□ 0.07
PFDN1-204ENST00000512707 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
PFDN1-204ENST00000512707 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
PFDN1-204ENST00000512707 UBR1Q8IWV7 1749 aa15.46■□□□□ 0.07
PFDN1-204ENST00000512707 ZNF142P52746 1687 aaPredicted RBP15.46■□□□□ 0.07
PFDN1-204ENST00000512707 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.06
PFDN1-204ENST00000512707 IQSEC2Q5JU85 1478 aa15.45■□□□□ 0.06
PFDN1-204ENST00000512707 PPLO60437 1756 aa15.44■□□□□ 0.06
PFDN1-204ENST00000512707 RIMS2Q9UQ26 1411 aa15.44■□□□□ 0.06
PFDN1-204ENST00000512707 NEXMIFQ5QGS0 1516 aa15.44■□□□□ 0.06
PFDN1-204ENST00000512707 IFT172Q9UG01 1749 aa15.44■□□□□ 0.06
PFDN1-204ENST00000512707 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
PFDN1-204ENST00000512707 TMEM2Q9UHN6 1383 aa15.44■□□□□ 0.06
PFDN1-204ENST00000512707 ZFYVE9O95405 1425 aa15.43■□□□□ 0.06
PFDN1-204ENST00000512707 PRAG1Q86YV5 1406 aa15.43■□□□□ 0.06
PFDN1-204ENST00000512707 DISP3Q9P2K9 1392 aa15.43■□□□□ 0.06
PFDN1-204ENST00000512707 MYO5BQ9ULV0 1848 aa15.43■□□□□ 0.06
PFDN1-204ENST00000512707 SLIT1O75093 1534 aa15.4■□□□□ 0.06
PFDN1-204ENST00000512707 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
PFDN1-204ENST00000512707 NRXN1Q9ULB1 1477 aa15.4■□□□□ 0.06
PFDN1-204ENST00000512707 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
PFDN1-204ENST00000512707 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
PFDN1-204ENST00000512707 ROCK2O75116 1388 aaKnown RBP15.38■□□□□ 0.05
PFDN1-204ENST00000512707 PIK3C2GO75747 1445 aa15.38■□□□□ 0.05
PFDN1-204ENST00000512707 NBPF8Q3BBV2 869 aa15.38■□□□□ 0.05
PFDN1-204ENST00000512707 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
PFDN1-204ENST00000512707 ARHGAP23Q9P227 1491 aa15.38■□□□□ 0.05
PFDN1-204ENST00000512707 LAMC1P11047 1609 aa15.37■□□□□ 0.05
PFDN1-204ENST00000512707 TXNDC2Q86VQ3 553 aa15.37■□□□□ 0.05
PFDN1-204ENST00000512707 BCANQ96GW7 911 aa15.37■□□□□ 0.05
PFDN1-204ENST00000512707 SCAF11Q99590 1463 aaKnown RBP15.36■□□□□ 0.05
PFDN1-204ENST00000512707 SOCS7O14512 581 aa15.36■□□□□ 0.05
PFDN1-204ENST00000512707 ANKLE2Q86XL3 938 aa15.36■□□□□ 0.05
PFDN1-204ENST00000512707 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
PFDN1-204ENST00000512707 TRPM1Q7Z4N2 1603 aa15.35■□□□□ 0.05
PFDN1-204ENST00000512707 PLEKHG1Q9ULL1 1385 aa15.35■□□□□ 0.05
PFDN1-204ENST00000512707 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
PFDN1-204ENST00000512707 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
PFDN1-204ENST00000512707 SETBP1Q9Y6X0 1596 aa15.32■□□□□ 0.04
PFDN1-204ENST00000512707 LTKP29376 864 aa15.31■□□□□ 0.04
PFDN1-204ENST00000512707 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
PFDN1-204ENST00000512707 CFAP70Q5T0N1 1121 aa15.31■□□□□ 0.04
PFDN1-204ENST00000512707 GPRASP1Q5JY77 1395 aa15.31■□□□□ 0.04
PFDN1-204ENST00000512707 EIF3AQ14152 1382 aaKnown RBP15.3■□□□□ 0.04
PFDN1-204ENST00000512707 ALKQ9UM73 1620 aa15.28■□□□□ 0.04
PFDN1-204ENST00000512707 DIP2AQ14689 1571 aa15.28■□□□□ 0.04
PFDN1-204ENST00000512707 USP47Q96K76 1375 aa15.28■□□□□ 0.04
PFDN1-204ENST00000512707 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
PFDN1-204ENST00000512707 POLR1AO95602 1720 aaPredicted RBP15.28■□□□□ 0.04
PFDN1-204ENST00000512707 ZNF335Q9H4Z2 1342 aaPredicted RBP15.27■□□□□ 0.04
PFDN1-204ENST00000512707 NCKAP5LQ9HCH0 1330 aa15.27■□□□□ 0.04
PFDN1-204ENST00000512707 IQGAP1P46940 1657 aa15.27■□□□□ 0.03
PFDN1-204ENST00000512707 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
PFDN1-204ENST00000512707 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
PFDN1-204ENST00000512707 MED14O60244 1454 aa15.25■□□□□ 0.03
PFDN1-204ENST00000512707 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
PFDN1-204ENST00000512707 ADGRB1O14514 1584 aa15.24■□□□□ 0.03
PFDN1-204ENST00000512707 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
PFDN1-204ENST00000512707 HSPA5P11021 654 aaKnown RBP15.23■□□□□ 0.03
PFDN1-204ENST00000512707 TMEM132EQ6IEE7 984 aa15.23■□□□□ 0.03
PFDN1-204ENST00000512707 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
PFDN1-204ENST00000512707 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
PFDN1-204ENST00000512707 YTHDC2Q9H6S0 1430 aaKnown RBP15.22■□□□□ 0.03
PFDN1-204ENST00000512707 PIK3R4Q99570 1358 aa15.22■□□□□ 0.03
PFDN1-204ENST00000512707 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
PFDN1-204ENST00000512707 UBAP1LF5GYI3 381 aa15.21■□□□□ 0.03
PFDN1-204ENST00000512707 LRPPRCP42704 1394 aaKnown RBP15.21■□□□□ 0.02
PFDN1-204ENST00000512707 SETD1AO15047 1707 aaKnown RBP15.2■□□□□ 0.02
PFDN1-204ENST00000512707 STK26Q9P289 416 aa15.2■□□□□ 0.02
PFDN1-204ENST00000512707 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
PFDN1-204ENST00000512707 ASXL1Q8IXJ9 1541 aa15.2■□□□□ 0.02
PFDN1-204ENST00000512707 METP08581 1390 aa15.2■□□□□ 0.02
PFDN1-204ENST00000512707 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
PFDN1-204ENST00000512707 ST20-MTHFSA0A0A6YYL1 179 aa15.18■□□□□ 0.02
PFDN1-204ENST00000512707 ABCC11Q96J66 1382 aa15.18■□□□□ 0.02
PFDN1-204ENST00000512707 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
PFDN1-204ENST00000512707 CPS1P31327 1500 aa15.17■□□□□ 0.02
PFDN1-204ENST00000512707 DLC1Q96QB1 1528 aa15.17■□□□□ 0.02
PFDN1-204ENST00000512707 POGKQ9P215 609 aa15.17■□□□□ 0.02
PFDN1-204ENST00000512707 TECPR2O15040 1411 aa15.16■□□□□ 0.02
PFDN1-204ENST00000512707 KNDC1Q76NI1 1749 aa15.15■□□□□ 0.02
PFDN1-204ENST00000512707 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
PFDN1-204ENST00000512707 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms