RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 NUP155O75694 1391 aa18.36■□□□□ 0.53
CDK7-208ENST00000512687 ZFYVE9O95405 1425 aa18.35■□□□□ 0.53
CDK7-208ENST00000512687 NAIPQ13075 1403 aa18.35■□□□□ 0.53
CDK7-208ENST00000512687 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
CDK7-208ENST00000512687 STAG3Q9UJ98 1225 aa18.35■□□□□ 0.53
CDK7-208ENST00000512687 SLC52A1Q9NWF4 448 aa18.33■□□□□ 0.52
CDK7-208ENST00000512687 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
CDK7-208ENST00000512687 CHD2O14647 1828 aaKnown RBP18.33■□□□□ 0.52
CDK7-208ENST00000512687 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
CDK7-208ENST00000512687 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
CDK7-208ENST00000512687 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
CDK7-208ENST00000512687 RIMS2Q9UQ26 1411 aa18.3■□□□□ 0.52
CDK7-208ENST00000512687 KIF1BO60333 1816 aa18.28■□□□□ 0.52
CDK7-208ENST00000512687 HFM1A2PYH4 1435 aa18.28■□□□□ 0.52
CDK7-208ENST00000512687 TRPM2O94759 1503 aa18.25■□□□□ 0.51
CDK7-208ENST00000512687 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
CDK7-208ENST00000512687 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
CDK7-208ENST00000512687 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
CDK7-208ENST00000512687 CHGAP10645 457 aaKnown RBP18.23■□□□□ 0.51
CDK7-208ENST00000512687 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
CDK7-208ENST00000512687 DIP2AQ14689 1571 aa18.22■□□□□ 0.51
CDK7-208ENST00000512687 TOM1O60784 492 aa18.22■□□□□ 0.51
CDK7-208ENST00000512687 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
CDK7-208ENST00000512687 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
CDK7-208ENST00000512687 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
CDK7-208ENST00000512687 NEXMIFQ5QGS0 1516 aa18.19■□□□□ 0.5
CDK7-208ENST00000512687 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
CDK7-208ENST00000512687 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
CDK7-208ENST00000512687 KCNA6P17658 529 aa18.18■□□□□ 0.5
CDK7-208ENST00000512687 HSPA1LP34931 641 aa18.18■□□□□ 0.5
CDK7-208ENST00000512687 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
CDK7-208ENST00000512687 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
CDK7-208ENST00000512687 BCANQ96GW7 911 aa18.16■□□□□ 0.5
CDK7-208ENST00000512687 PPLO60437 1756 aa18.16■□□□□ 0.5
CDK7-208ENST00000512687 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
CDK7-208ENST00000512687 ROBO1Q9Y6N7 1651 aa18.15■□□□□ 0.5
CDK7-208ENST00000512687 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
CDK7-208ENST00000512687 XRN1Q8IZH2 1706 aaKnown RBP18.15■□□□□ 0.5
CDK7-208ENST00000512687 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDK7-208ENST00000512687 RBM33Q96EV2 1170 aaKnown RBP18.15■□□□□ 0.5
CDK7-208ENST00000512687 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.49
CDK7-208ENST00000512687 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
CDK7-208ENST00000512687 HDGFP51858 240 aaKnown RBP18.12■□□□□ 0.49
CDK7-208ENST00000512687 PTPRUQ92729 1446 aa18.12■□□□□ 0.49
CDK7-208ENST00000512687 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
CDK7-208ENST00000512687 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
CDK7-208ENST00000512687 TBX22Q9Y458 520 aa18.11■□□□□ 0.49
CDK7-208ENST00000512687 IFT172Q9UG01 1749 aa18.11■□□□□ 0.49
CDK7-208ENST00000512687 MAPK8IP2Q13387 824 aaPredicted RBP18.09■□□□□ 0.49
CDK7-208ENST00000512687 SLC4A1APQ9BWU0 796 aaKnown RBP18.08■□□□□ 0.48
CDK7-208ENST00000512687 PIK3R4Q99570 1358 aa18.07■□□□□ 0.48
CDK7-208ENST00000512687 ZNF326Q5BKZ1 582 aaKnown RBP18.07■□□□□ 0.48
CDK7-208ENST00000512687 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
CDK7-208ENST00000512687 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
CDK7-208ENST00000512687 NALCNQ8IZF0 1738 aa18.05■□□□□ 0.48
CDK7-208ENST00000512687 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
CDK7-208ENST00000512687 MSH6P52701 1360 aa18.04■□□□□ 0.48
CDK7-208ENST00000512687 METP08581 1390 aa18.03■□□□□ 0.48
CDK7-208ENST00000512687 NCOA3Q9Y6Q9 1424 aa18.02■□□□□ 0.48
CDK7-208ENST00000512687 SETD5Q9C0A6 1442 aa18.01■□□□□ 0.47
CDK7-208ENST00000512687 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
CDK7-208ENST00000512687 MPHOSPH9Q99550 1183 aa17.99■□□□□ 0.47
CDK7-208ENST00000512687 COL16A1Q07092 1604 aaPredicted RBP17.98■□□□□ 0.47
CDK7-208ENST00000512687 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
CDK7-208ENST00000512687 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
CDK7-208ENST00000512687 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
CDK7-208ENST00000512687 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
CDK7-208ENST00000512687 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
CDK7-208ENST00000512687 DCCP43146 1447 aa17.93■□□□□ 0.46
CDK7-208ENST00000512687 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
CDK7-208ENST00000512687 NHSL1Q5SYE7 1610 aa17.93■□□□□ 0.46
CDK7-208ENST00000512687 RPGRIP1LQ68CZ1 1315 aa17.93■□□□□ 0.46
CDK7-208ENST00000512687 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
CDK7-208ENST00000512687 KNDC1Q76NI1 1749 aa17.92■□□□□ 0.46
CDK7-208ENST00000512687 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
CDK7-208ENST00000512687 PTCH1Q13635 1447 aa17.91■□□□□ 0.46
CDK7-208ENST00000512687 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
CDK7-208ENST00000512687 ADGRL3Q9HAR2 1447 aa17.91■□□□□ 0.46
CDK7-208ENST00000512687 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
CDK7-208ENST00000512687 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
CDK7-208ENST00000512687 MST1RQ04912 1400 aa17.89■□□□□ 0.46
CDK7-208ENST00000512687 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
CDK7-208ENST00000512687 ROBO2Q9HCK4 1378 aa17.89■□□□□ 0.45
CDK7-208ENST00000512687 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
CDK7-208ENST00000512687 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
CDK7-208ENST00000512687 ATF3P18847 181 aa17.87■□□□□ 0.45
CDK7-208ENST00000512687 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
CDK7-208ENST00000512687 PIK3C2GO75747 1445 aa17.86■□□□□ 0.45
CDK7-208ENST00000512687 LAMC1P11047 1609 aa17.86■□□□□ 0.45
CDK7-208ENST00000512687 ANKRD30BQ9BXX2 1392 aa17.85■□□□□ 0.45
CDK7-208ENST00000512687 ACIN1Q9UKV3 1341 aaKnown RBP17.85■□□□□ 0.45
CDK7-208ENST00000512687 SOCS7O14512 581 aa17.84■□□□□ 0.45
CDK7-208ENST00000512687 BRINP3Q76B58 766 aa17.84■□□□□ 0.45
CDK7-208ENST00000512687 MYOM2P54296 1465 aa17.83■□□□□ 0.45
CDK7-208ENST00000512687 NRXN1Q9ULB1 1477 aa17.83■□□□□ 0.45
CDK7-208ENST00000512687 JCADQ9P266 1359 aa17.82■□□□□ 0.44
CDK7-208ENST00000512687 LRP6O75581 1613 aa17.82■□□□□ 0.44
CDK7-208ENST00000512687 CDC42BPGQ6DT37 1551 aa17.82■□□□□ 0.44
CDK7-208ENST00000512687 RGS17Q9UGC6 210 aaPredicted RBP17.81■□□□□ 0.44
CDK7-208ENST00000512687 TECPR2O15040 1411 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms